Ictalurus punctatus (channel catfish): 108268267
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Entry
108268267 CDS
T04658
Name
(RefSeq) cytoplasmic dynein 2 intermediate chain 1 isoform X1
KO
K22869
WD repeat-containing protein 60
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
ipu03037
]
108268267
Cilium and associated proteins [BR:
ipu03037
]
Primary cilia and associated proteins
Dynein and associated proteins
108268267
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Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
Beta-prop_EML_2
WD40_CDC20-Fz
WDR55
Beta-prop_RIG_2nd
WD40_RFWD3
ANAPC4_WD40
Motif
Other DBs
NCBI-GeneID:
108268267
NCBI-ProteinID:
XP_047012468
UniProt:
A0A979EX78
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Position
7:complement(31911786..31922527)
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AA seq
1039 aa
AA seq
DB search
MYSGKKITKEDTWRSDDLIRHMRSQEEERRRRERSQRDPERERRKHREESGRRGEARDER
ERERGEAEHRDREKERQRDRDKDRDREKEKERDRDGLRERVKERDKEKDLEREKRNREKD
RDRNKERDREKEGGREKGDRGKDGERQKREREKDREREKGDREKDRERQKREKEKERDKL
KERGRDRGEERDREKDRERERRRAERENERRKEKEISVDGDDKFRERERDRKERHREREH
HRGGEEQDKERREQERREKHGHRQHTGKTDGEERREWRRREIEQHVKFNHEDGEIEQRHR
HQAGDGVMEREERDKRREQRNDDSNQRPREHESKHSETKQEVGNDVTEDNCEGAEDYGNE
DYEDDFEDYEEDFEEFDEDKEEEEEVRESEKREAEREMSPRSRREVEDIRRAMEKENELL
GTARSTPSTQGSEISDRVSADSRRSRTYGRVIDFTAARQREINQEAADKQKKRSTELLRL
IELDYSVTESLLDLPPVREYDLYIKSYGTANTKQAYVQCNEDNIERDTQTDEADIADKWT
QHPPETSVACGDPQISHNASGESVTRMSVDSKRLAAFLSSATQVMAVLLEENIAQSNSVK
KLQSHTHTLSFSDGCVHLNTQLNFLQGRQVTLLHFSQTQTHTLLSVHSPRSGSSDVTLDS
KTLVCVWNIWEPSTPQRILVCEAEVRSCCFSPGKAALVFAGTDVGSVLVWDLREHSGSHS
HVRVCEEEWTLRHPTFSTDAVLSGAGHFSSVVSVEPVLVNVGAGLRDPLLPDQEESLGLS
FQLGSLDENGLLNLWVVVELPKADDSGSQTDLGLRPGGKVKLLHSSSLQTTPQLDKGVIG
VTSHLRFVLKFLPSDSNHYFIGSNMGLVRHGTRHGLRAVPKLYRPKDGERLADVTALEFC
PTGEPFFLVGCSDGSVRLHALVCEEAVCEWTLGSGRAAVQCLHFSPTRCSVFCALDSTSV
LHIWDLTQRDESPLLTQDLHTDPVSAMAVSGDASTQNPYSSIALAKDSGRLEIHFLLPSL
TLPQASDTGKLHSLAQDTL
NT seq
3120 nt
NT seq
+upstream
nt +downstream
nt
atgtactccggaaagaaaataacaaaagaagacacatggagatctgacgatttaataagg
cacatgaggagccaagaggaggagaggaggaggagagagcgctcacagcgagacccagag
agagagaggaggaagcacagggaggaaagtggcaggagaggagaagccagggatgagaga
gagagagagcggggtgaggcggagcacagagacagagagaaagagcggcagagagatagg
gataaggacagagacagagaaaaagagaaagaaagagacagagatggattgagggagagg
gtgaaagagagagacaaggaaaaagatttagagagggaaaagaggaatagggagaaagat
agagaccggaataaagagagggatagggaaaaggagggagggagagaaaagggggacaga
ggaaaagatggagagagacaaaaaagggagagggaaaaggacagagagagagaaaagggg
gacagagaaaaagacagagagagacaaaaaagggagaaggaaaaggagagagataagctg
aaggagagagggagagatagaggggaagagagggatagggagaaagacagagagagggag
agaaggagggcagagcgagagaatgaaagaagaaaagagaaggaaattagtgtagatggg
gacgacaagttcagggagagagagcgagacaggaaagagaggcacagagagagggagcat
catcgtggaggtgaagaacaggataaagaacggagagagcaagaaagacgagagaaacac
ggccacagacagcacactggaaaaacagacggagaggaaagaagagagtggaggagaaga
gagatagagcagcatgtaaaattcaaccatgaggatggagagatcgagcagagacacaga
caccaggccggagatggagtgatggagagagaggagagggataaacggagagaacagagg
aacgacgattcgaatcagagacccagagagcatgagagcaagcacagtgaaactaagcag
gaggtgggaaatgacgtgactgaggacaactgtgaaggagcagaggattatgggaatgaa
gattatgaggatgattttgaggactacgaggaagactttgaggagtttgatgaggacaaa
gaagaagaagaagaggtgcgtgaaagtgaaaagagggaagcagagcgggagatgagtcca
cgcagcagacgggaggtcgaggacatccggagagccatggagaaggagaacgagctgctc
ggaacggcacggtccacaccctcgacccaggggtctgagatctccgacagagtgagtgcc
gactcaaggagaagtcgcacgtacggccgggtcatcgacttcaccgcagcgaggcagaga
gagataaaccaggaagcggccgataaacagaagaaacgcagcaccgagctcctgcgcctc
atcgagctggactattccgtcaccgagagtctcctggatctgcctccagtccgcgagtac
gacttgtacatcaagagctacgggacggccaacaccaagcaggcctacgtgcagtgcaac
gaggacaacatcgagcgagacactcagacggacgaggcggacatcgcggacaagtggaca
caacatccgccggagaccagcgtcgcgtgtggagaccctcagatttcccacaatgcatca
ggcgagtctgtcaccaggatgagcgtggactccaagcgactcgccgcgttcctcagttct
gccacgcaggtgatggcagtgttgctggaggaaaacatcgctcagagcaactcggtgaaa
aagctgcagtcacatacacacacactctccttcagtgacggctgtgttcatctcaatacc
cagctgaactttctacaaggtcgacaggtgacgttgttgcacttctcccagacgcagact
cacaccttgctctccgttcactccccgcgctccggctccagcgacgtcacactcgacagt
aagacgctggtgtgtgtgtggaacatctgggagccgtccacacctcagaggatcctcgtc
tgtgaagctgaggtgcggagctgctgcttcagtcccgggaaggccgcgctggtgtttgct
gggacagatgtgggctctgtgctggtgtgggatctgagagaacattccggctctcattcg
cacgtcagagtgtgtgaggaggagtggacactgcgtcacccgaccttctccaccgacgct
gtgctgtcaggagcagggcatttctcttccgtagtgtccgtcgagccagtcctggtcaac
gtgggggcggggcttagagatccactgctgccggaccaagaagagtcactgggtctgtca
ttccagctggggtcactggatgaaaacggactcctgaatctttgggttgtagtcgagttg
cccaaagctgatgattctggatcccaaacagacctgggtctgcgtccaggtggtaaagtg
aagctcctccacagttcctctctacagaccacacctcaactggacaagggggtcattggg
gtcacatctcacctgagatttgtcctgaaattcctcccctcagattctaaccactacttc
attggcagtaacatgggtttggtgagacatggtaccagacacggactccgagccgttccg
aagctctacaggcctaaagatggagagagactagcggatgtcacggctctagagttctgc
cccaccggagaacctttctttctggtgggctgcagtgacggttcggtgcgtctccatgcc
ttggtgtgtgaggaggcggtgtgtgagtggaccctgggttcgggtcgtgctgcggttcag
tgtctgcacttttccccgacgcggtgctccgtgttctgcgcgctggactctacatctgtc
ctgcacatctgggatctcacacagagagacgagtctccgctcctcacccaggacctccac
actgaccccgtctcagccatggccgtgtccggagacgcctccacgcagaacccgtactcc
agcatcgctctggctaaagactcgggcaggctggagatccacttcctgcttccctcgctc
acacttcctcaagcctcggacacggggaaactccactcgctggcacaggacacactctga
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