Ictalurus punctatus (channel catfish): 108268291
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Entry
108268291 CDS
T04658
Symbol
carmil3
Name
(RefSeq) capping protein, Arp2/3 and myosin-I linker protein 3 isoform X1
KO
K20493
leucine-rich repeat-containing protein 16
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ipu04131
]
108268291 (carmil3)
Membrane trafficking [BR:
ipu04131
]
Others
Actin-binding proteins
Nucleation-promoting factors (NPFs)
108268291 (carmil3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CARMIL_C
Carm_PH
LRR_6
Myosin_TH1
CagX
Motif
Other DBs
NCBI-GeneID:
108268291
NCBI-ProteinID:
XP_017328655
Ensembl:
ENSIPUG00000007075
UniProt:
A0A2D0RFI0
LinkDB
All DBs
Position
7:8225715..8284729
Genome browser
AA seq
1365 aa
AA seq
DB search
MAAKDSVPASFLSVSREMTESIKSVIDKPSVRFAQAIKVESKNGKSEDRVLVLATWRLYL
MAPKLPTKVEQTFNYLEIRAISPHPENQVVIETDKSTYVFRLQSSDHMDQLLGHINFTLS
RIFNNSMCVPSIFQADGEVPDGGHKYSPSSESSVEAQRACGGFSETYAALCDYNGISCKE
EVQWDVDTIYHSQDNRELNLLDFAHLESRDLAVIVASMAYNTWFTKLYCKDMRLSSEVVD
QVLHTVSKSSSLEELTLENAGLKADFPQKMAAALSENPASVLHSLNLAYNTFDNQGVSNL
IQQVCQLSKGLRLLNLSKTSFSSKGVSSLSQALCSSDDYSNSLLHLDLSKNPGILSGEDA
TNLYLFLAQPNCLVHLDLSGTDCTVESLFGALLRGCCADLSYLNLSKNSFSQRKVKDTLP
TLRQFFTSAFSLSHLSMASMKMPPDVLRALFLGLSSNPHVSDLHLDISGCELRSAGAAVI
KDLFPQVSSISTLDISDNGLDADLYTVIPAFSRHPSLKHLLLGKNFNVKGRLLDEILQKL
VQLVQEEECGLKSLSLADSRLRSRGTVLVNALGSNACLRKVDLSGNGLEDTGARMLSKAL
QINTTLRSVTWDRNNTTAAGFQDVARSMEHNFTLQCMPVPLSDVTQAYRNSPEKTEQATT
KIQRALLRNNQTQRFSQKQALRLHQGLVTSTAEQVMERLCVRVQQQVCVLRASGEGEELQ
AARQVLKEARNSRALYPSLCELAHVLSIDGPVRQKLESITGELAKAADKELQVIVDSMVS
LCRELCPLSSAAAEHLSPPLSSISERVSIPRSAIRTALMERAAQDINQALEEVKMSVVSY
LTNSAVDQILQELYATHKTLLQQVARVRRPDDSATIRAALRHADIVDIPEDDFSISIDTI
AIKKRSSRTRRIRPVSTRLSLGDDPNLSPSLPAPRSSALFSHIASWDNLSSLPTQGAPLR
HVTHIRPRPPRKHRPGHAPSDMHSSENGGVNLLDDGLPDFYTKRVLPDSQLSSHHTQTLR
RKKRRTVLSIFSGFRKNRYSASHQEPEPVIQGEVCGDECRTESLNPSAGTENLYSVIIPK
DFRRAETSQEEVTSGLGDQRPPQISGRNLHGIPLPGLRTVSPSCITWRQSPEYSEVFISS
GTPVHTKRNNKGQKAPKDNQDKPLVQGSNSSSAQLEEDVTVESQQKPDPPPQSSKPSLGD
TRQHHLEENSEDAEEDAEGEKDVDDEKEDIQSQEAKKQKAEGQTPPLSEKLDNSPEESSD
ENQVQPPVPCARTKPTSRLVDSPVTQGAEEDSSSSGAATKPHKNRKAHSCEAGFTSGMEE
GSPGDVERSSDPKPPVKKPRLPQRRNKSFDTPGRQSPEPSSSEAS
NT seq
4098 nt
NT seq
+upstream
nt +downstream
nt
atggccgcgaaagacagcgtaccggcgagctttctgagcgtgagccgggagatgacagag
agcatcaagagcgtgattgacaaaccgtctgtcaggtttgcacaagccatcaaagtggaa
agcaagaatgggaaatcagaagacagggttttggtgttggctacatggcggctgtacctc
atggcgccaaaattgccaaccaaggtggagcaaacatttaactacctggagattcgtgct
ataagccctcatccagagaatcaggtcgtcatagagacagacaagtccacctacgtcttc
aggctacagtcgagtgaccacatggatcagctgctcggccacatcaacttcactctctcg
cgcatcttcaacaactccatgtgcgttccctcgatctttcaagcagatggtgaggtccct
gatggggggcataaatattcgccaagctccgaatcatcagtggaggctcagagagcgtgt
ggaggtttctcggagacctacgctgcgctgtgcgactacaacggcattagctgcaaagag
gaagtgcagtgggatgtggacactatatatcactcccaggacaatagggagcttaatctg
ttggacttcgctcacctagagagcagagaccttgccgtcatcgtggcatccatggcgtac
aacacatggttcaccaagctctactgcaaagacatgcgcttaagctcagaggtagtggac
caggtcctccacaccgtcagtaagtccagcagtctggaagaactcactctggagaatgca
ggccttaaagcagatttccctcagaaaatggctgccgctctgtcagaaaacccggcgtct
gtgctccactccctcaacctggcctacaacacattcgacaatcaaggagtgtcaaatctc
atccagcaggtgtgtcagctcagcaaaggcctccgtctgcttaacctctccaagacctca
ttctcctctaaaggtgtgagttctctgtcgcaggctctgtgttctagtgatgactactcc
aactctcttctgcatctcgacctgagcaagaacccgggcattctttctggggaggacgct
acgaatctgtacctgttcttggctcagcccaactgcttggtgcatttggatctctcaggc
acagactgcacagtggaatcactatttggcgctttgctccgaggctgctgtgctgatctc
tcctacctgaatctctcaaagaactccttctctcaaaggaaagtgaaagacacattgccc
accttacgtcagttctttacctcagcattcagcctcagccatctcagcatggcctcgatg
aagatgcccccagatgtgctcagggctctctttctgggactgtcgtcgaatcctcatgtc
tctgacctgcacctggacatcagtggttgtgagctcagatcagcaggagcagcagtgata
aaggacttgtttccccaagtctcctccatcagtaccctggacatctcagataatggcttg
gacgctgatctttacacggtcatccctgccttctctcgccacccctccctcaagcatctg
ctgctgggcaagaatttcaatgtcaagggcaggctgctggatgaaatcctacaaaaacta
gtgcagttagtgcaagaagaagagtgtggtctgaagagtttgtccctagctgactccaga
ctgcgatcccgaggaactgtgctagtgaatgcacttggcagcaacgcatgcctcaggaaa
gtggatttgagcggcaatggtctggaggacacgggggccaggatgctgagcaaagccctg
cagatcaacaccactctcaggagcgtgacgtgggatcggaacaataccacagctgctggg
tttcaggatgtagcacgctctatggagcataatttcactctgcagtgcatgcctgtgcct
ctgagcgatgttacacaggcataccgcaattcccccgagaagacggaacaggcaacgaca
aagatccagcgggcattgttaagaaacaaccagactcagcgcttctctcagaaacaggct
ctcagactgcatcagggtctggtgactagcaccgctgagcaggtgatggagcgcctgtgc
gtgcgtgttcagcagcaggtatgtgtattaagagcatcaggcgagggagaggagctgcag
gctgccagacaagttctgaaggaggccaggaactctcgtgctctgtacccttctctgtgt
gagctggctcatgtgctttccatagatgggccagttcgacagaaactagagtctatcact
ggagaactggctaaagcagctgacaaagagctacaagtgattgtggactccatggtatct
ctgtgtcgggaactgtgtcccctttcctcggctgcagcagagcatctttctcctcctctc
tcttctatctctgagcgcgtgtccatcccccgttctgccatccgcactgcgttgatggag
agagcagcccaggacatcaaccaagctctagaagaagtaaagatgtctgtggtttcctat
ctcaccaactcagcagtggaccagatccttcaagagctctatgctactcacaagacactg
cttcaacaggtggctcgagtgaggcgaccggacgacagtgccacgatccgagccgcactc
cgacatgctgacatcgttgacatccctgaggacgattttagtatcagcattgatacaatt
gccataaagaagcgcagctctaggactcgacgcatccgacccgtctccaccaggctgagt
ctaggcgatgatcccaacttgtccccttcacttccagcacctcgttcatctgctctgttt
tctcacatagcctcttgggacaatttgtccagcttgcctactcaaggtgcacctttgcgc
cacgtaacccacataagaccccgcccaccaagaaagcataggcctggacacgccccttca
gatatgcattcttctgagaacggtggggtgaaccttttggatgatggactgcctgatttc
tacaccaagagggtcttaccagacagccaattgtcctctcatcatacccagactctgagg
cggaagaagaggcgcaccgtgctgtccatcttttcaggattccggaagaaccgttactcc
gcatcacatcaagagccggagcctgtgatccagggggaagtgtgtggcgatgaatgtcgc
accgagtctttaaatcccagcgctggtacagagaacctgtactctgtgattatccctaag
gatttccggagggcagagacatcgcaagaagaagtcaccagcggtctgggagatcaaaga
cctcctcagatctctggccgaaatttgcacggcataccgctgccagggttgaggacagtg
agcccctcctgcatcacatggagacaatcacccgaatacagcgaggtgttcatctcctca
ggcacgcccgtccacacaaagagaaacaataaaggacagaaagctcctaaagacaatcaa
gacaagccacttgtccagggttcgaactcgtcctctgctcagctggaggaggacgtgacg
gtggagtcgcagcagaaacccgatcctcctcctcagagcagcaagccgagtctgggggac
accagacagcaccatctggaggagaactctgaggatgctgaagaggatgctgaaggagag
aaagatgtggacgatgaaaaagaggacatccagagtcaggaagcgaaaaagcaaaaagca
gaaggacaaactcctcccctctctgaaaagctagataattcaccggaggaatcttctgac
gagaatcaagtacagcctcctgtaccatgtgcccgtaccaagcctacatccagattggta
gattcccctgtcactcaaggtgcggaggaagactcctcctcaagtggagcggctacaaag
cctcacaagaaccgaaaggctcactcctgcgaagcaggctttacttcaggcatggaggaa
ggcagccccggcgatgtggagaggtcctcagaccctaaacccccagtgaaaaagccacga
cttcctcagagaagaaacaaatcttttgatactcctggtcgacaaagtccagagccaagc
agcagtgaagcctcgtga
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