Ictalurus punctatus (channel catfish): 108268400
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Entry
108268400 CDS
T04658
Symbol
lingo2
Name
(RefSeq) leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 2
KO
K23533
leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ipu04131
]
108268400 (lingo2)
Membrane trafficking [BR:
ipu04131
]
Endocytosis
Lipid raft mediated endocytosis
RhoA-dependent endocytosis
108268400 (lingo2)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
Ig_3
I-set
LRR_5
ig
Ig_2
LRR_9
V-set
LRR_RPS2
LRRNT
Ig_6
Sp38
Motif
Other DBs
NCBI-GeneID:
108268400
NCBI-ProteinID:
XP_017328837
Ensembl:
ENSIPUG00000003219
LinkDB
All DBs
Position
8:29245490..29529593
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AA seq
614 aa
AA seq
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MVDCLSRVMLHTAISCWQPLLGLALVAIFLGSALACPSRCECSAQSRSVICHRKRYPTIP
DGIPIETRILDLSKNRIQAINPDDFSVYPHIEELDLSGNIIAYVEPGAFNLLSSLHSLSL
KSNRIKLLSLGVFTGLSNLTTLDISDNKIVILVDYMFQDLHNLKSLDVGDNELVYISHRA
FNGLISLESLTLERCNLTMVPTDALSHLHNLVSLHMRYLSISSLQPYSFKKLFRLRHLEI
DNWPSLDVFPANTLHGLNLTTLSVTNTNLSTFPYQALRHMPYLTHLNLSHSHIRTVEGGL
LQDLVRLRELRLAAAQLVSVEPYAFQGLRWLRLLDVSHNRLDTLEKGVFHAPQSLEVLLI
NDNPLVCDCRLMWLLQKQHSVSFGEEQPECSTPEGIRGRPFKEVKETLSYYMTCTKPKIR
ENRTQLVSVEEGQPAQLHCSAEGTPRPTISWVTPRRRHLTNRSHGRVMVHNNGSLYIKAV
ELQDGGVYVCVASNTAGNDTLMVSLAVKSLGSLYANRTQYYIDPNSTTANSTNTPNTTFG
LDLKTILVSTAMGCFTFLGVVLFCFLLLFVWSRGKGKHKNNIDIEYVPRSKSNGASPEEA
EQTSGPRRFNMKMI
NT seq
1845 nt
NT seq
+upstream
nt +downstream
nt
atggtggactgcctgagtcgagtcatgttgcacacagctatatcttgctggcagccactg
ctgggactggccctggtggccatcttcttaggctctgcccttgcctgcccttcccgctgt
gagtgctctgcccaaagtcgctccgtcatctgccataggaaacgttacccgactatacca
gacggcattcccattgaaacacgtatcctggacctgagcaagaaccgcatccaggccatc
aatccagatgacttctctgtctacccacacattgaagagctggatctgagtggcaatatc
attgcctatgtagaaccaggcgctttcaacttactctctagtttgcactcgctcagtttg
aagagcaaccgcatcaagctcctgtcactgggagtattcaccgggctttcaaacctcacc
acgctcgacattagtgacaataagatcgtcatcctggtcgattacatgttccaggatttg
cataatctcaagtcattagacgtaggggacaatgagctggtgtatatctcacaccgagcg
ttcaatggcctgatttcactggagagtctaacactggagcgctgtaatctgaccatggtg
ccaacggatgccctgtcccaccttcacaacttggtgagcttgcatatgcgctacctcagc
atcagcagcctccaaccttactccttcaagaaactattccgcctgcgccacctggagatt
gacaactggccttcactggacgttttcccagccaacactttgcatggcctcaacctcacc
acactttctgtcactaacaccaatctgtccacattcccgtaccaagccctgcgccacatg
ccttacctcacgcacctgaacctgtcccacagccacatccgcactgtggaaggaggtctt
ctgcaggacctggtgcgtctccgtgagttgagattagcagcagcccagctggtgtctgtg
gagccctatgcattccagggtctacgttggctcagacttcttgacgtgtcccataacagg
ctggacactttggagaaaggtgttttccatgctccacagtctctggaagtgttgctcatt
aatgacaatcctcttgtgtgtgactgccggctcatgtggctgcttcagaagcagcactca
gtctcatttggagaagagcaacctgaatgcagtactcctgagggaatccgcgggcgccct
ttcaaggaggtcaaggaaaccctgtcctactacatgacctgcaccaagcccaagatccga
gagaaccggacacagctggtgtcggtagaggaagggcagcctgcccagctacactgcagt
gccgaggggactcctcgacccaccatttcctgggtcacaccacgcagaagacatctgacc
aacaggagtcatggaagagtaatggtgcacaacaatggctcactctatatcaaggcagtg
gagcttcaagatggtggcgtgtatgtatgcgtggcctctaacacagctggaaatgacacg
ctcatggtgtccttggccgtcaagagtctgggctcactctatgctaataggacccagtac
tacatagatcctaacagtactactgccaacagcaccaatacccccaacacaacctttggc
ctggacctaaagaccatccttgtttctacagccatgggttgtttcacattccttggagtc
gtcctgttctgttttctgctcctgtttgtatggagtcggggcaaaggaaagcacaaaaac
aacattgatatagagtatgtgccacgctccaagtccaacggggcctcgcctgaggaagca
gaacagacctctggccctcgacgctttaacatgaaaatgatttaa
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