KEGG   Ictalurus punctatus (channel catfish): 108268416
Entry
108268416         CDS       T04658                                 
Name
(RefSeq) DET1 homolog
  KO
K10571  de-etiolated-1
Organism
ipu  Ictalurus punctatus (channel catfish)
Pathway
ipu04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:ipu00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    108268416
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:ipu04121]
    108268416
Ubiquitin system [BR:ipu04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     108268416
SSDB
Motif
Pfam: Det1
Other DBs
NCBI-GeneID: 108268416
NCBI-ProteinID: XP_017328864
Ensembl: ENSIPUG00000008962
UniProt: W5U5R4
LinkDB
Position
8:complement(1238673..1247849)
AA seq 551 aa
MASSEDEFPTLKPRRIQNQNVVHRLELRRISSGRAGAHWYRVRCFHQNLFPNFTAVNVEK
PPCFLRKFSPDGRCFVAFSSDQTSLEIYEFRGCQAAEDLLQDHDEGRDGEVLSESVRARL
FSRFFSLLHVTSVASNGEHLNRECSLFTDDGRYVIVGSAAYLPDEPQPHFFEVYRNNEAV
TPNPRSPLEDYSLHIVDLHTGRLCDTRAFKCDKIILSHNQGLYLYRNILAVLSVQQQTIH
VFQVTAEGTFLDVRTIGRFCYEDDLLTLSAVYSEAQAEGPAGFSRLYKEKSISSLKHRLL
VFLWRRAERDGSATAKRRFFQFFDQLRQLRMWKMQLLDENHLLIKYTSEDVVTLRVTDPS
QPSFFVVYNMVSTEVIAVFENTSDQLLELFENFCDLFRNATLHSEAVQFPCSASSNNYAR
QVQRRFKDTIVNAKYGGHTEAVRRLLGQLPISAQSYSSSPYLDLSLFSYDDKWVSVMERP
KTCGDHPIRFYARDSGLLKFKIQAGLLGRPINHAVRRLVAFTFHPFEPFAISVQRTNAEY
VVNFHMRHSSS
NT seq 1656 nt   +upstreamnt  +downstreamnt
atggcgtcttcagaagacgagttcccgaccctgaagccgcgccgcattcagaaccagaac
gtcgtgcacagactggagctgcggcgcatcagctccggccgagccggtgctcactggtac
cgtgttcgctgtttccaccagaacctcttccccaacttcaccgccgtgaacgtcgagaag
cctccgtgtttcctgcggaagttctctccggacggccgctgctttgtcgcgttctcgtcg
gaccagacctcgctggagatctacgagttccggggctgccaggcggccgaagatctgctc
caggaccacgacgagggccgagacggcgaggttctgagcgagagcgtgcgagcccgtctg
ttctcgcgctttttctcgctgcttcacgtgaccagcgtggcgtccaacggcgagcatctg
aaccgtgagtgcagcttgttcacggacgacgggcgctacgtgatcgtgggctcggcggcg
tacctgcccgatgagccccagccgcactttttcgaggtttatcgcaacaacgaggcggtg
actccaaacccgcgctcgccgctcgaggactactcactccacattgtcgaccttcacacg
ggacgcctctgtgacacgcgtgcctttaaatgtgataaaatcattctgtcgcataatcag
ggactttacctgtacaggaacattctcgctgtcctctccgtccagcagcagaccatccac
gtctttcaggtgacggcggaggggacgttcctggacgtgcgtacgatcgggcggttctgt
tacgaggacgatctgttgacgctgtcggccgtgtactcggaggcgcaggcggaggggccg
gccgggttctcgcggctctataaggagaagagcatcagctccctgaagcaccggctgctg
gtgttcctgtggagacgagccgagcgagacggcagcgccaccgccaaacgccgcttcttc
cagttcttcgaccagctgcggcagctgcgcatgtggaagatgcagctgctggacgagaac
cacctgctgatcaaatacaccagcgaggacgtggtgaccctgcgcgtcactgacccctca
cagccgtctttcttcgtggtgtataacatggtgagcacggaggtaatagcggtgtttgag
aacacgtcggatcagctgctggagctgtttgagaatttctgtgatctgttccgtaacgct
acgctgcacagtgaggctgtacagttcccctgctcggcctccagcaacaactacgcccgg
caggtgcagcgcaggtttaaggacactatagtgaatgcgaagtacggcggtcacacggag
gcggtgcggcgtttactcggtcagctgcccatcagcgctcagtcgtacagcagcagcccg
tacctcgacctctcactgttcagctacgacgacaagtgggtctcagtgatggagcgacca
aaaacctgtggagatcaccccatacggttttatgcgcgagactctggcttgttgaagttt
aaaatccaggctggtcttctgggtcggccgataaatcacgccgtgcgccgcctcgtggcc
ttcaccttccacccgttcgaaccgttcgccatctcagtgcagcgcaccaacgccgagtac
gtcgtcaacttccacatgcgccacagcagctcctga

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