Ictalurus punctatus (channel catfish): 108268416
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Entry
108268416 CDS
T04658
Name
(RefSeq) DET1 homolog
KO
K10571
de-etiolated-1
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
108268416
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ipu04121
]
108268416
Ubiquitin system [BR:
ipu04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
108268416
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Det1
Motif
Other DBs
NCBI-GeneID:
108268416
NCBI-ProteinID:
XP_017328864
Ensembl:
ENSIPUG00000008962
UniProt:
W5U5R4
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Position
8:complement(1238673..1247849)
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AA seq
551 aa
AA seq
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MASSEDEFPTLKPRRIQNQNVVHRLELRRISSGRAGAHWYRVRCFHQNLFPNFTAVNVEK
PPCFLRKFSPDGRCFVAFSSDQTSLEIYEFRGCQAAEDLLQDHDEGRDGEVLSESVRARL
FSRFFSLLHVTSVASNGEHLNRECSLFTDDGRYVIVGSAAYLPDEPQPHFFEVYRNNEAV
TPNPRSPLEDYSLHIVDLHTGRLCDTRAFKCDKIILSHNQGLYLYRNILAVLSVQQQTIH
VFQVTAEGTFLDVRTIGRFCYEDDLLTLSAVYSEAQAEGPAGFSRLYKEKSISSLKHRLL
VFLWRRAERDGSATAKRRFFQFFDQLRQLRMWKMQLLDENHLLIKYTSEDVVTLRVTDPS
QPSFFVVYNMVSTEVIAVFENTSDQLLELFENFCDLFRNATLHSEAVQFPCSASSNNYAR
QVQRRFKDTIVNAKYGGHTEAVRRLLGQLPISAQSYSSSPYLDLSLFSYDDKWVSVMERP
KTCGDHPIRFYARDSGLLKFKIQAGLLGRPINHAVRRLVAFTFHPFEPFAISVQRTNAEY
VVNFHMRHSSS
NT seq
1656 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcttcagaagacgagttcccgaccctgaagccgcgccgcattcagaaccagaac
gtcgtgcacagactggagctgcggcgcatcagctccggccgagccggtgctcactggtac
cgtgttcgctgtttccaccagaacctcttccccaacttcaccgccgtgaacgtcgagaag
cctccgtgtttcctgcggaagttctctccggacggccgctgctttgtcgcgttctcgtcg
gaccagacctcgctggagatctacgagttccggggctgccaggcggccgaagatctgctc
caggaccacgacgagggccgagacggcgaggttctgagcgagagcgtgcgagcccgtctg
ttctcgcgctttttctcgctgcttcacgtgaccagcgtggcgtccaacggcgagcatctg
aaccgtgagtgcagcttgttcacggacgacgggcgctacgtgatcgtgggctcggcggcg
tacctgcccgatgagccccagccgcactttttcgaggtttatcgcaacaacgaggcggtg
actccaaacccgcgctcgccgctcgaggactactcactccacattgtcgaccttcacacg
ggacgcctctgtgacacgcgtgcctttaaatgtgataaaatcattctgtcgcataatcag
ggactttacctgtacaggaacattctcgctgtcctctccgtccagcagcagaccatccac
gtctttcaggtgacggcggaggggacgttcctggacgtgcgtacgatcgggcggttctgt
tacgaggacgatctgttgacgctgtcggccgtgtactcggaggcgcaggcggaggggccg
gccgggttctcgcggctctataaggagaagagcatcagctccctgaagcaccggctgctg
gtgttcctgtggagacgagccgagcgagacggcagcgccaccgccaaacgccgcttcttc
cagttcttcgaccagctgcggcagctgcgcatgtggaagatgcagctgctggacgagaac
cacctgctgatcaaatacaccagcgaggacgtggtgaccctgcgcgtcactgacccctca
cagccgtctttcttcgtggtgtataacatggtgagcacggaggtaatagcggtgtttgag
aacacgtcggatcagctgctggagctgtttgagaatttctgtgatctgttccgtaacgct
acgctgcacagtgaggctgtacagttcccctgctcggcctccagcaacaactacgcccgg
caggtgcagcgcaggtttaaggacactatagtgaatgcgaagtacggcggtcacacggag
gcggtgcggcgtttactcggtcagctgcccatcagcgctcagtcgtacagcagcagcccg
tacctcgacctctcactgttcagctacgacgacaagtgggtctcagtgatggagcgacca
aaaacctgtggagatcaccccatacggttttatgcgcgagactctggcttgttgaagttt
aaaatccaggctggtcttctgggtcggccgataaatcacgccgtgcgccgcctcgtggcc
ttcaccttccacccgttcgaaccgttcgccatctcagtgcagcgcaccaacgccgagtac
gtcgtcaacttccacatgcgccacagcagctcctga
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