Ictalurus punctatus (channel catfish): 108268436
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Entry
108268436 CDS
T04658
Name
(RefSeq) relaxin receptor 1 isoform X1
KO
K04306
relaxin family peptide receptor 1
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
108268436
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
ipu04030
]
108268436
G protein-coupled receptors [BR:
ipu04030
]
Rhodopsin family
Peptide
Relaxin
108268436
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
7tm_1
LRR_5
LRR_4
LRR_1
LRR_9
Ldl_recept_a
TMC
Motif
Other DBs
NCBI-GeneID:
108268436
NCBI-ProteinID:
XP_017328900
Ensembl:
ENSIPUG00000017384
UniProt:
A0A2D0RG79
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Position
8:complement(26284836..26342218)
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AA seq
745 aa
AA seq
DB search
MHICIFGMLLCCASVALTAFNVSEEHGPCPLGYFPCGNLSSCLPQLLHCNGVDDCGNQAD
EDNCGDNNGWPHLFDKYFGMPSKDAGTKSTTCLLGLVPAECQCRDLELDCNGAHFKDVPA
VSTNVTMMSLQRNRLRKLNADMFIKYQNLQKLYLQHNRIKVVEPYAFRGLYNLTRLYLSH
NRISSLMPGVFQDLHKLEWLILENNKIHHISSLTFSGLSSLVLLVLLNNALTNVDDICLE
MPRLNWLDMEENQMEIVDNRTFWSCSMLTVLVLQRNRISHIHEQAFSLLRKLGELDLSSN
RIEKISPDLFVNLGDLLQLNISYNPIQELQVDHFDKLHKLKSLSIEGIEIGNIHRRMFEP
LKNLTHIYFKKFQYCGYAPHVRSCKPNTDGISSFEDLLANIVLRVFVWVVSATTCFGNIF
VICMRSYIRSENKLHAMCIISLCCADGLMGVYLFVIGAYDLKFRGEYNRHAQAWMDSLPC
QVVGSLAMLSTEVSVLLLTYLTLEKYICIVYPFRYLAPGRRRTVTILVAIWILGFIIAFL
PLVCKGVFRNFYGTNGVCFPLHSEQPETAGAQIYSIVIFLGLNLVAFLIIVLSYGSMFYN
IQRTGTQTTKYSNHIKKELTVAKRFFSIVITDSLCWIPIFILKILSLMEVEIPGTISSWV
VIFILPINSALNPILYTLTTRPFKETLLQVWTNYRQRRPLLSSHPAHHPSFTWQEMWPLH
ENSQNVVSPEYLAHPSEMSCTSRTS
NT seq
2238 nt
NT seq
+upstream
nt +downstream
nt
atgcacatctgcatctttggcatgctcttgtgctgtgcctcagtggctctgacggcattt
aatgtgtcagaagagcatggtccttgtcctctcggttatttcccctgtgggaatctgagc
tcctgcctgccacagctgttgcactgtaatggagttgacgactgtggaaaccaggcagac
gaggataactgtggagacaacaatggctggcctcatttgtttgacaaatactttgggatg
cccagtaaagacgctggaaccaagtcaaccacatgtctacttgggctcgtaccagccgag
tgtcagtgtagggatttggagctcgactgcaacggtgctcactttaaagacgtccctgcg
gtatctacgaacgtcaccatgatgtctttgcaaaggaaccggttgaggaaactgaacgct
gacatgttcattaagtaccaaaatcttcagaagctatacctacagcacaatcgcatcaaa
gtggttgaaccctacgcgttccgaggcctttacaacctgacgcggctgtatttgagccac
aatcgaatctctagcctaatgccaggcgtatttcaggacctgcacaaactggaatggctg
attctggaaaacaacaaaatccaccatatttcctctctgaccttttcaggcttgagctct
ctcgtgctgctggttcttttgaacaacgctctgacaaatgtggatgatatatgcctggag
atgccacgattaaattggctagatatggaagagaatcagatggagattgtggacaataga
acattctggtcctgtagcatgcttaccgtgctagtccttcagaggaacaggatcagtcat
atccacgagcaagcgttctctctgctgcgcaagctgggcgagctagacttatccagtaac
agaattgagaaaatctcaccggatcttttcgtgaatcttggagacttgctgcagctgaat
atttcatacaacccaattcaggagcttcaagtggaccatttcgacaaactgcacaaactg
aagtcattgagcatcgagggtatcgagattgggaacattcacaggaggatgtttgaacct
ctgaaaaacctcacacatatctattttaaaaagttccagtattgtggctatgctcctcac
gtacgcagctgcaagcccaacacagatggcatctcatcatttgaggaccttctggccaac
attgtgctgcgtgtctttgtctgggtcgtgtctgccaccacctgctttggcaacattttc
gtcatctgcatgcgctcgtacatccgctcagagaacaagcttcatgccatgtgcatcatt
tccctttgctgtgctgatggtttgatgggtgtctacttgtttgtgatcggggcgtacgac
ctgaagttccgcggcgagtataaccgccatgcacaggcctggatggacagcttgccctgt
caggtggtaggctctctggccatgctatccaccgaggtctctgttctgctcctcacctac
ctcaccttggagaaatacatctgcatcgtctacccgttccgctacctggcgcccgggcgc
aggcgcaccgtcaccatcctggtggccatctggatcctgggcttcatcatcgctttcttg
cctctggtgtgtaaaggagtgttcaggaacttctacgggaccaatggggtttgttttcct
ttgcactctgagcagcccgagactgcaggagctcagatctactccatcgtcatctttctg
ggcctgaacctcgtggcattcctcatcatcgtgttgtcttacggaagcatgttttacaac
atccagagaacagggactcagacaaccaaatacagcaatcacatcaagaaagagctcacc
gtggccaaacgcttcttctccatcgtcatcaccgattccctgtgctggataccaattttc
atcctcaagatcttatccctcatggaggttgaaatcccaggcaccatcagctcatgggtg
gttatcttcatcctgcccataaacagtgctctaaatcccattctctacactctgaccaca
cggcccttcaaggagaccctgctgcaagtctggaccaactacaggcagcgtcggccattg
ctcagcagtcacccggcccatcatccttcctttacttggcaagaaatgtggcctctgcat
gaaaatagccagaatgtagtgtctccagagtacctggcacatccatctgagatgtcctgc
acctcaaggacttcctag
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