Ictalurus punctatus (channel catfish): 108268455
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Entry
108268455 CDS
T04658
Symbol
pax6a
Name
(RefSeq) paired box protein Pax-6 isoform X1
KO
K08031
paired box protein 6
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ipu03000
]
108268455 (pax6a)
Transcription factors [BR:
ipu03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain Paired-related
108268455 (pax6a)
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Gene cluster
GFIT
Motif
Pfam:
PAX
Homeodomain
HTH_32
Homeobox_KN
HTH_Tnp_IS1
Motif
Other DBs
NCBI-GeneID:
108268455
NCBI-ProteinID:
XP_017328934
Ensembl:
ENSIPUG00000010089
UniProt:
A0A2D0REG7
LinkDB
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Position
8:complement(19541366..19561170)
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AA seq
452 aa
AA seq
DB search
MPQKEYYNRTTWESGVASMMQNSHSGVNQLGGVFVNGRPLPDSTRQKIVELAHSGARPCD
ISRILQTHADAKVQVLDNENVSNGCVSKILGRYYETGSIRPRAIGGSKPRVATPEVVSKI
AQFKRECPSIFAWEIRDRLLSEGICTNDNIPSVSSINRVLRNLASEKQQMGADGMYEKLR
MLNGQTGAWGTRPGWYPGSSVPGQQNQVEGCQQSDGGGENTNSISSNGEDSDEAQMRLQL
KRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNRRAKWR
REEKLRNQRRQANNSTSHIPISSSFSTSVYQPIPQPTTPVSFTSGSMLGRSDTALTNTYS
ALPPMPSFTMANNLPMQASQTSSYSCMLPTSPSVNGRSYDAYTPPHMQAHMNSQSMATSG
TTSTGLISPGVSVPVQVPGSEPDMSQYWPRLQ
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
atgcctcaaaaagaatactataaccggaccacgtgggagtctggtgtagcgtccatgatg
caaaacagtcacagcggggtgaaccagctcggcggtgtgttcgttaacggcagaccgctg
cctgattccacccgacagaaaatcgtggagctcgcgcacagcggcgcccgcccctgcgac
atatcccggattctgcagacccatgccgatgcaaaagtccaagtgctggacaatgaaaac
gtgtccaatggatgtgtgagtaagatcttgggcaggtactacgaaacgggctcgatcaga
ccgcgcgcgatcggcggaagtaaaccgcgagtggccacacctgaggtggtcagcaaaatc
gcccagtttaagagggagtgcccgtccattttcgcgtgggaaatccgagacagactgctc
tccgagggcatctgcacgaacgacaacataccgagcgtgtcgtccataaaccgagtgctg
cgcaacctggctagcgagaagcaacagatgggagcagatggcatgtatgagaagctgagg
atgctgaacggacagacgggagcgtgggggacccggccgggctggtaccccggatcatcg
gtgccaggacagcagaaccaagtagaaggctgtcagcagtcagatggaggtggtgaaaac
acaaactcgatcagctcaaacggtgaagactcggacgaggcccagatgcgactccagtta
aagagaaaactgcaaaggaaccgcacatctttcacccaagagcagatagaggcgcttgag
aaagagtttgaaagaacacactatccagacgtttttgcccgtgagagacttgcagcaaaa
attgacttaccagaggccagaatacaggtatggttctcaaacagaagagcaaaatggagg
agggaagaaaagctgaggaatcagagacgacaagccaataactccaccagtcacatacct
atcagtagcagctttagcacaagcgtctatcagccaatccctcagccgacaacgccagtg
tcctttacatcaggctccatgttgggacggtcagacacggcgctcaccaacacatacagc
gccctcccaccaatgccaagcttcacaatggccaacaacctgcctatgcaagcaagccag
acctcatcctactcctgcatgctgcccaccagtccttcggtgaatgggcggagctacgat
gcctacacaccccctcacatgcaggcacacatgaacagccaatcgatggccacctcgggc
acaacctcaacgggtctaatctcgcctggagtgtctgtaccagtacaagtgccaggcagt
gaacctgacatgtcccaatattggcccaggctacagtga
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