Ictalurus punctatus (channel catfish): 108268469
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Entry
108268469 CDS
T04658
Name
(RefSeq) SLIT and NTRK-like protein 2
KO
K25833
SLIT and NTRK-like protein 2
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu04514
Cell adhesion molecule (CAM) interaction
ipu04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
108268469
04517 IgSF CAM signaling
108268469
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_5
LRR_4
LRR_14
LRR_9
LRRNT
LRRCT
LRR_LRWD1
Insulin_TMD
Motif
Other DBs
NCBI-GeneID:
108268469
NCBI-ProteinID:
XP_017328968
Ensembl:
ENSIPUG00000014371
UniProt:
W5UCD4
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Position
8:23798143..23801892
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AA seq
854 aa
AA seq
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MLNNVLLLSVLTITGFSSRTESRKTSKDICKSRCPCEEKENALNINCENKGFTSVSSFQP
PQNKISQLFLNGNFLTRLNANEFVNYGNVTSLHLGNNGLQEIKTGAFNGLKNLKRLHLNN
NNLEIIKEDTFSGLESLEYLQADYNYISAIEAGAFNKLNKLKVLILNDNLLLSLPNNIFR
FVMLTHLDLRGNRLKTLPFAGVLEHIGGIMEIQLEENPWNCTCDLVPLKAWLDTIAVFVG
DVVCETPFRLHGKDVTQLIKQDLCPRRSTGDSTPRAMQPPPPDPQHRVPVPTSRTHFAPT
RAPKASRPPRMRSRPTPRVTSGRDKHVFGPIMVYQTRSPVPMTCPSICVCTSQSPDSGLN
VNCQERKLHNISDLQPKPSYPKKLHLTGNHLQIIYRADLTEYSTLELLHLGNNRIAIIQD
GAFENLTNLRRLYLNGNYIESLSQALFAGLQSLQYLYLEYNIIKDILPNTFNSLHNLQLL
FLNNNLLRSLPDNVFGGTMLTRLNLRNNHFSHLPVSGVLDQLSAFVQIDLQENPWECTCG
IVPLKNWMELSSTSVVVNEITCDSPSKHAGRLLRSLRNDAICSENDETPAPATKAPTIIS
ISTEVTPSSAATPTEDTQPETHQEVPLSVLILGLLVVFILSVCFGAGIFVFVLKRRKAVE
SVPATAAANSLDLSSFQAHYGHYDTEQSTGKREGHVYNYIPAAVGQMCPNPIYVQKENEH
VAYYRNLKELGFAAPDPKREEFGRSPTYTISTLERVEENPQHSSCEPELLYQNMAERVRE
LPTTAPFGYSFCTLPKRPLAPPYEAAGRPNRERQNKTVLYGTPRKHAEQLLPAKLKTEPD
YLEVLEKHTAMSQL
NT seq
2565 nt
NT seq
+upstream
nt +downstream
nt
atgttgaacaacgttttgctgctgagcgttttgacaataaccggcttctcctcgcggacg
gagagccgcaaaacttcgaaggacatttgtaagagccgctgtccgtgcgaggagaaggag
aacgcgttaaacatcaactgcgagaacaaaggatttacgagtgtgagttcgtttcagccg
ccgcagaataaaataagccagcttttcctgaacgggaactttctcacgagactgaacgcc
aacgagttcgtcaattacggtaatgtcacatctctccatttgggcaataacgggctgcag
gagattaaaacgggggcgttcaatggcctaaaaaacctcaaacgcctccatctgaacaat
aacaatttggagattataaaagaagacacattttctggcttagaaagtttagagtatttg
caggctgattacaattatataagtgccatagaggcaggtgcgttcaataagctgaacaag
cttaaagtcctcatacttaatgataaccttttgctctctctgcctaacaatatattccga
tttgtgatgctgacacatttggatttgaggggaaaccggctgaagacgctaccgtttgct
ggcgtcttggagcacataggcggcattatggagatacagctggaggagaacccatggaac
tgtacgtgtgaccttgttccactcaaggcctggctggataccattgcggtgtttgttggc
gatgtggtttgtgagacgccgtttcgtttgcatggcaaagatgttactcagctcataaag
caggacctctgccctaggcgcagtactggtgactcgactcctcgtgccatgcagccacca
cctcctgatccccagcatcgggtcccagtacctacatcacgtacacattttgcgccaact
agggcacctaaggcatcccggccacccaggatgaggagccgccctactccacgtgttact
tctggcagggacaagcatgtttttggcccaattatggtttatcagacaaggtcccctgta
cctatgacatgcccgagtatctgcgtgtgcacatcccaaagcccggacagtggactgaac
gttaactgccaagagaggaagcttcacaacatctctgatctgcaacccaaaccgtcatat
ccaaaaaagctacatttaactggaaaccatttacagatcatatacagggctgatctgaca
gaatatagcaccctggaacttctccacctggggaataacagaatcgctattattcaggat
ggggcctttgagaatctgactaatttgcgtaggctttacctcaacggcaactatatcgaa
agtttatcacaggccttgtttgctggactacagagcttgcagtacctctacctagagtac
aacattatcaaggacattttgccgaacacgtttaactcactgcacaatctgcagcttctc
ttcctcaacaacaacctgctgaggtccctacctgacaatgtgtttgggggcacaatgcta
acaaggctcaatctcagaaacaatcacttctcacatcttccagtgagcggggtgcttgac
cagctctcagcatttgtccagattgatctccaggagaacccatgggagtgcacgtgtggc
attgtaccactcaagaactggatggagctgtccagcactagtgtggttgttaatgagatc
acttgtgactctccttcaaagcacgcaggtcgcctcctgcggtcactacgcaacgatgct
atctgctctgagaatgacgagactccggcaccagccaccaaggcaccaaccattatcagc
attagcactgaagtcactccttcctctgctgcaacacctacagaagacacacaacctgaa
acacaccaggaagtacccttgtctgtacttatcttgggcctgcttgttgtgttcattctt
tcagtgtgttttggggctggaatatttgtatttgtgctcaagcggcgcaaggcagtggag
agtgtcccagctactgcagctgccaatagcctagatctgagctctttccaagcgcattat
ggccattatgacacagaacaaagcacaggtaaaagagagggccatgtctacaactatatc
cctgccgctgttggccagatgtgcccaaacccgatctatgtgcagaaggaaaatgagcat
gtagcctactatcgcaatttgaaagaactgggttttgctgcaccagaccccaagagggag
gagtttggtcgtagtcccacttatacaataagcactttggaacgtgtagaagagaatccc
caacacagcagctgtgaaccagaacttctttaccagaacatggcagagagggtaagagag
cttcccaccactgctccctttggctacagcttttgcactctgcccaaaaggccattagcg
ccaccatacgaggctgcagggcggcccaaccgggagcgacagaacaaaactgtcttgtat
gggacgccaagaaagcatgctgaacagctgctccctgctaagctgaaaacggagccggac
tacctcgaggttctagagaaacacactgcaatgagtcagctgtaa
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