Ictalurus punctatus (channel catfish): 108268604
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Entry
108268604 CDS
T04658
Symbol
nocta
Name
(RefSeq) nocturnin isoform X1
KO
K18764
nocturnin [EC:
3.1.3.108
]
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ipu03019
]
108268604 (nocta)
Enzymes [BR:
ipu01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.108 nocturnin
108268604 (nocta)
Messenger RNA biogenesis [BR:
ipu03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
108268604 (nocta)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos_2
Motif
Other DBs
NCBI-GeneID:
108268604
NCBI-ProteinID:
XP_017329139
Ensembl:
ENSIPUG00000017932
UniProt:
W5UQ52
LinkDB
All DBs
Position
8:complement(26788363..26797969)
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AA seq
432 aa
AA seq
DB search
MFPVKRCSSLIQRDLAALCLSSLGSAQNQPASGQHALSPRFLHAGSRCGESCTGPRELHT
SRSSPLLQACQMGSSSVRFFSSLAQSLSSAPLEHTHTDAEECEPEPVDPETLLRQCEEVL
RKRPPRPNREFIRTRTSATHDPQIRVMQWNILAQALGEGKDGFVRCPMEALVWSERKYLI
LEEILTYRPDIVCLQEVDHYYDTFQPVMASLGYQSSFCPKPCSPCLDVSGNNGPDGCALF
FSRERFRLLHINHLRLSAMALKTNQVAVVATLQCRVTGRVFCVAVTHLKARSGWETFRGA
QGANLLQQLKAILSAQQDENVPLFVCGDFNAEPGEEVYRRFMNSPLGLDSAYRTLSSAEP
SYTTWKIRPSGESCTTLDYVWFSRHGFSVDGVLSMPSEEQIGPDRLPSYHYPSDHLSLVC
DFSFIQEPHRLM
NT seq
1299 nt
NT seq
+upstream
nt +downstream
nt
atgtttccggtaaagcggtgctcttcgctcatacagagggatctggccgcgctttgcctc
tcatcactgggatctgctcagaatcaacccgcttccgggcagcacgcgctctctccgcgt
ttcctacacgccgggagccgctgtggagagtcctgtaccgggcccagggagctccacacc
agccggtcatctccattattacaggcgtgtcagatgggcagcagcagcgtcagattcttc
agttctctggctcagtctctgagcagcgcgccgctggagcacacacacaccgacgctgag
gagtgtgagccggagccggtcgacccagagacgctcctgcgccagtgcgaggaggttctg
aggaaacgaccgccgcggccaaaccgagaattcatcagaaccagaaccagcgccacacac
gacccgcagatccgcgtcatgcagtggaacattctagcacaagctctgggcgagggcaag
gacggcttcgtgcgctgcccgatggaggcgttagtctggtccgagaggaagtacctgatc
ctggaggagattctgacctacagaccagacatcgtgtgtctgcaggaggtggaccactac
tacgacaccttccagcccgtgatggccagcctgggctaccagagcagcttctgccccaag
ccgtgctctccgtgcctggacgtcagcggcaacaacggccccgacggctgcgccctgttc
ttcagccgcgagcgtttccgtctgctccacatcaatcacctgcgtctctccgccatggcg
ctcaagaccaaccaggtggccgtcgtggctacgctacagtgccgggtcacggggcgagtc
ttctgcgtcgccgtgacgcacctgaaagcgaggagcggctgggagaccttccgtggcgcc
cagggtgccaatcttctccagcagctgaaggccatcctgagcgcgcagcaggacgaaaac
gttcctttgttcgtgtgcggagatttcaacgccgaaccgggtgaagaggtgtaccgccgc
tttatgaactctccgctcggcctcgatagcgcctacaggacgctgagctccgccgagccg
tcctacaccacctggaagatccgtccgagcggagagagctgcacgacgctcgattacgtc
tggttctcgcgccacggcttcagcgtagacggcgtcctgagcatgcccagcgaggagcag
atcggcccggaccgccttccctcctaccactatccttccgatcatctctcgctcgtctgc
gacttcagcttcatccaggagccccacagactcatgtga
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