Ictalurus punctatus (channel catfish): 108268615
Help
Entry
108268615 CDS
T04658
Symbol
frmpd1b
Name
(RefSeq) uncharacterized protein frmpd1b
KO
K23954
FERM and PDZ domain-containing protein 1
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
ipu04990
]
108268615 (frmpd1b)
Domain-containing proteins not elsewhere classified [BR:
ipu04990
]
Other domain-containing proteins
FERM domain-containing proteins
108268615 (frmpd1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FERM_M
PDZ
RA_2
PDZ_6
FERM_C_FAK1
PDZ_2
FERM_f0
Adenosine_kin
Motif
Other DBs
NCBI-GeneID:
108268615
NCBI-ProteinID:
XP_017329154
UniProt:
A0A2D0RF33
LinkDB
All DBs
Position
8:9208952..9253498
Genome browser
AA seq
1614 aa
AA seq
DB search
MEERERSRSRSPRRVRRVEQVVGRWLRRSRDSLSRERILGDRKLGRSDDGGQQHFPVKET
VEVIRDAVLDSHGFTLSTQLPLLVRDVIPGGPADGRLLPGDQVLKVNNKAIEDLSPEYVD
NMIRQCQDSLTVTVLRNMMNPKSSFMSAEKRARLRRNPVKVRFAEEVLVNGHTQGNSLLF
LPNVLKVYLENGQTKAFKFDKTTTVKDIVLTLKDKLSIRSIEYFSLVLEQQYSITKLLLL
HEDELIQKVVQKKDSHDYRCLFRVCFIPRDPVDLLHDDPVAFEYLFHQSVGDVLQERFAV
EMKCNTALRLAALHMHERLASCGQTTRASIKNITKEFGLESFISPTLLRNMREKDLRKAL
AGHMKKIQSLLEPRQKVISVPQARLAYLTQMAELVSYSGRTYNATMLLQDRESLVSLLVG
ARFGVSQILNHKLNMISTIIDFHYISRVEVLSESDRVSMLKIYLHDIQPLALLMDSVAAK
DLACLLAGYCKLLVDPNMNVFRWGPRPKIRRIPLEEGFGFRCGSDSEESSDEDYTMDNLL
DTPVSEDTVSTQTNDDREDEKDEEKEEAKANTVRVIVTQIEEEENVVEGTLEGTSTSGSI
EDEDYAARVDALLETGWYTDPRVNSSFSSLSSNSFNTLEEISKVSTTWPARLATFQEEMP
KSDQATGASSLDVHHPFLLEIPEHLNQKEKSNRPSDLLYDKHSGLRYSDLSQMSDSLPSP
PEASDDALSDLEEINKDENKNYRPADIDAVLASGSSNSMKSTVAGFNVQALLSRIRSHPA
CKKDLRNSNLHQKEEAKTKGTLSRPKVQPPPPPLRILSRVSQIAKDSRNSGSESEEEFFD
AQDRLTPPILEQPAEKKVNVNGMEHALRQTDAKTSVEEPAASKMQSRLDKPHDDNSLPIS
RNTLNKDISLLKDLTPAKNILGNRELEGHQPSEILLPQPAMLEPNLISNNRISEKKGQQC
NGDIPGRNAHISSELLEMEPDTMEFKPVTSAGPPQSSPLITAVRQTKSQLPSTVDSATVS
IDSQNIIKPIDSKQDEIVKEEKTEEHQSLPPLQPKKEVFAEPPEPNKPISKVSQPSSGQA
LKTEDVSNGISLHTWSQRNGATPGPPLNKGVSLSHENLKCQLRNENTAVTVTSASTLTAT
PPPSVAMRGSTSMDPKDPFGIGRSFSSRGSSGRLSASALRGKIQDMPWYLTRSQEILGTV
ALSRDKLIDTKASQDAADYKDSKKESPKSTSVPALNDWKEKDAEVVVVKLKDGPQEVASQ
VKDTSGKMSLSGHPDLRQNGLQDSTELFSRLGTCRSEQPKSQKNTATKDNLETSSPPSST
GTPHRDACGCHTVYANCFSGDSEDLCGFDDDLTVYEFSRQKRINKPPQSTAPSSAPSSNI
LSLLRDSPHPLSTSSELSPLFTPPRPRPLGYNPLDNPLRDLQERRYVTGLKGTGLKGGYT
SLHKDIDELLLVLKNGETAINPSGQKALCQTASGINGNSFSETERCLVQAEARRLASGCQ
RATRVGWAPDDALLSLGNSFGALVHLAAACLQVSCSDCGSCHGDIDGTEALRKLQEIVCL
YKEFVIAVEAAREGEGVRLLAKQCTVLISTVFTLTQLFRTHTPDTDNRHLPLNF
NT seq
4845 nt
NT seq
+upstream
nt +downstream
nt
atggaggaaagagagagaagtaggagtcgatccccgcgtcgggttcgtcgggtagagcag
gttgtagggagatggctgcgccgatcacgagactccctcagcagggagcgtattcttggg
gacaggaagttgggccgttcagacgatggtggtcaacagcatttcccagtgaaggagaca
gtggaggtgatcagagatgctgtgttggactcgcatggctttacactctccacacagctc
cccctgctggtcagggacgttattccaggaggaccagcagatggacgcctcttaccaggt
gatcaagtattgaaagtgaataacaaagccattgaagacttatctcctgaatatgttgac
aacatgattaggcagtgccaggattctctaaccgtgacagtcctcagaaacatgatgaac
cccaagtcctcgtttatgtcggcagaaaagagagctcgcctgagaagaaatccggttaaa
gtgcgctttgccgaggaagtattagtcaacggacacactcagggaaactcccttctcttc
ctgcccaatgtgcttaaggtctacctggagaatgggcaaaccaaagccttcaaatttgat
aagaccaccacagtgaaggacattgtgctgactttaaaggacaagctgtcaattcgctct
attgaatatttctccctggtgctggagcagcaatacagcatcaccaaactgctgttactg
catgaagatgagctcatacagaaggtggtccagaagaaggactcgcatgattacagatgt
ctgttccgagtgtgttttatccctcgagatccagtggacctgctgcacgatgacccagtc
gcctttgagtacctctttcaccagagcgttggggatgtgctgcaggagcggtttgcagta
gagatgaaatgtaacactgctttgaggctagcagcactacatatgcacgaaaggttggcc
agctgtggacaaactaccagagcatctatcaagaatattactaaggagtttggattagag
agttttatttcacccacattactgaggaacatgagagagaaagatctgcggaaagctctt
gcaggtcatatgaagaaaatccagtcactgctcgaaccgcgtcaaaaagtaatctcggtg
cctcaggccaggttggcatatctaactcagatggcagaactggtatcatatagtgggaga
acctacaatgccaccatgctgctgcaggaccgggagtccttggtgagtttgttggtggga
gcgcgatttggtgtcagtcagatactaaaccacaagctgaacatgatctcgactattata
gacttccattacatcagccgtgtagaagtgctctctgagtctgacagggtcagcatgctg
aagatctacctacatgatatccagcccctggccttgctaatggattctgtagccgctaag
gacctggcatgtctgctggcaggctattgcaaattgttagtggatcccaatatgaacgtg
ttccgctggggccctcgccccaaaatacgtcgtatacctttagaagaaggctttggattc
cgctgtggcagtgactcagaggagagctcagatgaggactacaccatggacaacctgcta
gacacaccagtctctgaggacactgtctcaactcaaacaaacgatgaccgagaagatgag
aaagatgaggagaaagaagaggccaaagcaaacacagtaagggtgattgtgacccagata
gaagaagaggagaatgtagtagaaggtactctagaaggaacaagtacaagtggctctatt
gaggatgaggactatgcagcaagagtagatgcacttctggaaacaggatggtacacagac
ccgagagtcaacagcagcttctctagtctgtccagtaactcgtttaacactcttgaggag
attagcaaagtatccactacatggcctgctcgtttggccacttttcaggaggagatgcca
aaatcagaccaggctactggggcctctagcctggatgtccaccatcctttcctgctagag
atccctgaacatctgaaccagaaagagaaatcaaaccgcccctctgacttgctctatgat
aagcacagtggcttgcggtacagtgacctctcccaaatgtctgactcccttccaagccca
cctgaagcaagtgatgatgctctgagtgatttggaagagattaataaagatgaaaacaaa
aattatagacctgcagacattgacgctgtgttagcctcgggtagtagtaatagcatgaaa
tctacagtagctggcttcaatgtccaagcacttttatcaaggatccgtagccatccagca
tgtaagaaagatctgaggaattctaacctccaccagaaagaggaagcaaagaccaaaggg
actttgtccagaccaaaagttcaacctccacctccaccactaagaatattatccagagtt
tctcaaatagcaaaggacagcagaaacagtgggtcagaatcagaagaagagttctttgat
gcacaggatcgtctcactccaccaatcttggaacaacctgcagaaaagaaagtaaatgtg
aatggaatggagcatgctctgagacagactgatgcaaagaccagtgtggaggaaccagca
gcatccaagatgcaaagtcgattggacaagccacacgatgacaattctttacctattagt
agaaacactctaaataaggacatttctctccttaaagatctcactcctgcaaaaaatatt
ctgggtaatagagagctggagggtcaccagccatcagagattctgcttcctcaaccagcc
atgcttgaacctaatcttatctcaaataatcgcatctcagagaagaagggccaacaatgt
aatggagatattcctggccgtaatgctcacatatcctctgagcttttggagatggagcca
gacactatggagtttaagcctgttacttcagctggaccaccacagtcttcccccttaatc
acagcagtgcggcaaactaaatcccagctaccaagcacagtggattctgcaacagtttcg
attgatagtcagaatattataaaacctatagactctaaacaagatgaaatagttaaagaa
gagaaaacagaagaacaccaatcacttcctcctctgcagcccaagaaagaagtttttgca
gaacccccagaacctaacaaacccatatccaaagtttctcagccatcatctggtcaagct
ctgaaaactgaagatgtttcaaatgggatttctttgcatacttggtcccagcggaacggg
gccaccccgggccctcctctgaataaaggggtctctctaagccatgagaatcttaaatgc
caactaagaaatgagaatactgcagtcacggtgaccagcgcttcaactctgacagccact
cctcccccatctgtggctatgagaggctctacaagtatggatcccaaagatccctttggg
attggaaggagttttagcagcagaggttcttctgggcgtctgtccgcttcagcactacgt
ggaaagatccaggacatgccctggtatctcacccgatcccaggaaattttggggacagtt
gcactcagcagggataaattaatagacactaaagcatctcaggatgccgctgattacaag
gactctaaaaaggaatcgccaaaatccacttcagtacctgctttgaatgattggaaagag
aaagatgctgaggtggttgttgtgaagcttaaagatgggccacaagaagtagcctcgcag
gtaaaagacacaagtgggaaaatgtcattgtctggtcatccagacctaaggcagaatggg
ttacaagactccactgaacttttctcacgcttgggaacatgcaggtctgaacagcctaag
tctcaaaaaaacactgctacaaaggataatctggaaacatcatctcctccatctagcact
ggcacaccccaccgtgatgcatgtgggtgccatactgtttatgccaattgctttagtggt
gattctgaggatttgtgtggttttgatgatgatctgacggtgtacgagttctctcgtcag
aaacgaatcaacaaaccaccccagtccactgcaccttcctctgccccttcttccaacatc
ctgtctctgctaagagactcacctcaccccctttcaacctcttctgagcttagtcctctc
tttacgccaccccggcctagacccctgggttacaacccattggacaatccactacgggat
cttcaagaaagacgatatgtaacgggcctaaaaggcactgggcttaaagggggctacacg
tccctgcacaaagatattgatgaacttctgctggtgcttaagaatggtgagactgcaata
aatccttcaggccagaaggcgctgtgtcaaacggctagtggtattaatggcaattcattt
tctgaaacggagcgctgtttagtgcaggctgaggcacggaggctggcctcaggatgccag
cgtgccacacgagttggttgggcaccagatgatgctcttctctcattgggcaatagcttt
ggagctttggtacatctagcagcagcttgccttcaagtgtcctgttcagactgtggaagt
tgccatggtgatattgatggcactgaggctctaaggaagcttcaagaaattgtgtgtttg
tacaaggagtttgtgatagctgtagaagcagcccgagagggagagggcgtcaggttgtta
gctaaacaatgcacggttctcatctctacagtcttcactctaacacagctattcaggaca
cacactccagacacagacaacagacatttacccctaaacttctga
DBGET
integrated database retrieval system