Ictalurus punctatus (channel catfish): 108268620
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Entry
108268620 CDS
T04658
Name
(RefSeq) tubulin beta chain isoform X1
KO
K07375
tubulin beta
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu04145
Phagosome
ipu04540
Gap junction
ipu04814
Motor proteins
ipu05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
108268620
09144 Cellular community - eukaryotes
04540 Gap junction
108268620
09142 Cell motility
04814 Motor proteins
108268620
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
108268620
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ipu03036
]
108268620
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ipu04812
]
108268620
04147 Exosome [BR:
ipu04147
]
108268620
Chromosome and associated proteins [BR:
ipu03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Other tubulins
108268620
Cytoskeleton proteins [BR:
ipu04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulins
108268620
Exosome [BR:
ipu04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
108268620
Exosomal proteins of colorectal cancer cells
108268620
Exosomal proteins of bladder cancer cells
108268620
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tubulin
Tubulin_C
Tubulin_3
Tubulin_2
Motif
Other DBs
NCBI-GeneID:
108268620
NCBI-ProteinID:
XP_017329163
Ensembl:
ENSIPUG00000020843
UniProt:
A0A2D0RF61
LinkDB
All DBs
Position
8:9530340..9549658
Genome browser
AA seq
564 aa
AA seq
DB search
MVSQFSLWLITKYQKGGISKHLHFEEDIVTKYGTLHLVSSVKLMDFIPMEMCMIYKTASE
VDFRLCRYCKNITKAVILHGLLSVPPGTNLYSCSALMVCTAPDHTDLYMDPGSLQGLFTE
LRDDNPVNINRTVILLCKFWTVICDEHGIDPTGKYNGNSDLQLDRINVYYNEARGGRYVP
RTVLVDLEPGTMDSVRSGPFEPIFRPDNFVFGQSSAGNIWAKGHYTEGAELVDSVLDVVR
REAESCDCLQGFQLTHSLGGGTGSGMGTLLISKIRDEYPDRIMNTFSVVPSPIVSDSVVE
TYNAILSFHQLVQNTDETFCLDNEALHDICLRTLKITAPSYSVLNTLISHTMSGVTTCLR
FPGQLNADLRKLAVNMVPFARMHFFIPGLAPLISRDIQPYLALTVPELIRQMFDAKNMMA
SCDPRHGRYLTVAAIFRGSVSTRDVEMGMIDVQNRYSRNFIDWIPNNVMIAVYDIPPHGV
KMAATFIANSTAIQELFIRLSTQLMSMFRHRRYLHWYTAEGMDEMEFTEAESNIADLVSD
YQAYQDATGDDEGEFEEEEGEEVP
NT seq
1695 nt
NT seq
+upstream
nt +downstream
nt
atggtgtctcagttcagtttatggctaattactaaataccagaaaggtgggatatcaaaa
cacttgcattttgaagaggacattgtgactaaatatggaactttgcatttggtttcttca
gtaaagctgatggactttataccgatggaaatgtgcatgatttacaaaaccgcaagcgaa
gtggattttcgtctatgtaggtattgtaagaacataaccaaggcagtcatcctccatggc
cttcttagtgtgccacctggaaccaacctgtacagctgctctgccctcatggtctgtact
gcccctgaccatacggatctctacatggatcctggttctctgcaaggtctattcactgag
ttacgtgatgacaatccagtgaatataaacaggactgtaattctattatgcaagttctgg
actgtcatctgtgatgagcatgggattgatcctacaggcaaatacaatggcaacagtgat
cttcaactagacagaattaatgtatactacaatgaagctagaggtggcaggtatgtccct
cgtactgtattagtggatttggagccgggtaccatggactccgtgaggtctggacctttt
gagccaattttcaggcctgacaactttgttttcggccagagtagtgctggcaatatctgg
gccaagggccactacacggaaggtgctgagctggtggattctgtcctggatgtggtgcgg
agggaggcagagagctgcgactgcctccagggcttccagctcacccactcactgggtggt
ggtactgggtcaggcatgggcaccctgctcatcagcaaaatccgtgatgagtaccctgac
cgcattatgaataccttcagcgttgtcccctcacccatagtctcggattcagtggtggag
acttataatgccatactgtcgttccaccagctggtacagaacacggatgagactttctgc
ttagacaatgaagccctgcatgacatctgtttacgcaccctcaagatcacagcaccaagc
tacagtgtcctgaacaccttgatctctcacaccatgagtggagtcacaacatgtctgagg
ttccctgggcagctcaatgctgacctgcgcaaactggctgtcaacatggtgccatttgcc
cgtatgcacttcttcattcctggtcttgctccactgattagcagggacatccagccatac
cttgctctcactgtgcctgaattaatccggcagatgttcgatgccaagaacatgatggct
tcttgcgatccacgccacggccggtacctcacggtggctgccattttccgtggcagcgtg
tccacaagggatgtggaaatggggatgatcgatgtgcagaacagatatagcagaaacttc
attgactggatccccaacaacgtgatgatagctgtgtatgacatcccaccccatggcgtg
aagatggccgccaccttcattgcgaacagcaccgctatccaggagctgttcattcgcctc
tctacacagttaatgtccatgttcagacacaggagatacctgcactggtacacagctgag
ggtatggatgaaatggagttcacagaggctgagagcaacatagccgacctagtatcagac
taccaggcataccaggatgcaactggtgacgatgaaggagagtttgaggaggaggaaggg
gaggaggtgccgtaa
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integrated database retrieval system