KEGG   Ictalurus punctatus (channel catfish): 108268620
Entry
108268620         CDS       T04658                                 
Name
(RefSeq) tubulin beta chain isoform X1
  KO
K07375  tubulin beta
Organism
ipu  Ictalurus punctatus (channel catfish)
Pathway
ipu04145  Phagosome
ipu04540  Gap junction
ipu04814  Motor proteins
ipu05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:ipu00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    108268620
  09144 Cellular community - eukaryotes
   04540 Gap junction
    108268620
  09142 Cell motility
   04814 Motor proteins
    108268620
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    108268620
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:ipu03036]
    108268620
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:ipu04812]
    108268620
   04147 Exosome [BR:ipu04147]
    108268620
Chromosome and associated proteins [BR:ipu03036]
 Eukaryotic type
  Centrosome formation proteins
   Microtubules and associated factors
    Other tubulins
     108268620
Cytoskeleton proteins [BR:ipu04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulins
    108268620
Exosome [BR:ipu04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   108268620
  Exosomal proteins of colorectal cancer cells
   108268620
  Exosomal proteins of bladder cancer cells
   108268620
SSDB
Motif
Pfam: Tubulin Tubulin_C Tubulin_3 Tubulin_2
Other DBs
NCBI-GeneID: 108268620
NCBI-ProteinID: XP_017329163
Ensembl: ENSIPUG00000020843
UniProt: A0A2D0RF61
LinkDB
Position
8:9530340..9549658
AA seq 564 aa
MVSQFSLWLITKYQKGGISKHLHFEEDIVTKYGTLHLVSSVKLMDFIPMEMCMIYKTASE
VDFRLCRYCKNITKAVILHGLLSVPPGTNLYSCSALMVCTAPDHTDLYMDPGSLQGLFTE
LRDDNPVNINRTVILLCKFWTVICDEHGIDPTGKYNGNSDLQLDRINVYYNEARGGRYVP
RTVLVDLEPGTMDSVRSGPFEPIFRPDNFVFGQSSAGNIWAKGHYTEGAELVDSVLDVVR
REAESCDCLQGFQLTHSLGGGTGSGMGTLLISKIRDEYPDRIMNTFSVVPSPIVSDSVVE
TYNAILSFHQLVQNTDETFCLDNEALHDICLRTLKITAPSYSVLNTLISHTMSGVTTCLR
FPGQLNADLRKLAVNMVPFARMHFFIPGLAPLISRDIQPYLALTVPELIRQMFDAKNMMA
SCDPRHGRYLTVAAIFRGSVSTRDVEMGMIDVQNRYSRNFIDWIPNNVMIAVYDIPPHGV
KMAATFIANSTAIQELFIRLSTQLMSMFRHRRYLHWYTAEGMDEMEFTEAESNIADLVSD
YQAYQDATGDDEGEFEEEEGEEVP
NT seq 1695 nt   +upstreamnt  +downstreamnt
atggtgtctcagttcagtttatggctaattactaaataccagaaaggtgggatatcaaaa
cacttgcattttgaagaggacattgtgactaaatatggaactttgcatttggtttcttca
gtaaagctgatggactttataccgatggaaatgtgcatgatttacaaaaccgcaagcgaa
gtggattttcgtctatgtaggtattgtaagaacataaccaaggcagtcatcctccatggc
cttcttagtgtgccacctggaaccaacctgtacagctgctctgccctcatggtctgtact
gcccctgaccatacggatctctacatggatcctggttctctgcaaggtctattcactgag
ttacgtgatgacaatccagtgaatataaacaggactgtaattctattatgcaagttctgg
actgtcatctgtgatgagcatgggattgatcctacaggcaaatacaatggcaacagtgat
cttcaactagacagaattaatgtatactacaatgaagctagaggtggcaggtatgtccct
cgtactgtattagtggatttggagccgggtaccatggactccgtgaggtctggacctttt
gagccaattttcaggcctgacaactttgttttcggccagagtagtgctggcaatatctgg
gccaagggccactacacggaaggtgctgagctggtggattctgtcctggatgtggtgcgg
agggaggcagagagctgcgactgcctccagggcttccagctcacccactcactgggtggt
ggtactgggtcaggcatgggcaccctgctcatcagcaaaatccgtgatgagtaccctgac
cgcattatgaataccttcagcgttgtcccctcacccatagtctcggattcagtggtggag
acttataatgccatactgtcgttccaccagctggtacagaacacggatgagactttctgc
ttagacaatgaagccctgcatgacatctgtttacgcaccctcaagatcacagcaccaagc
tacagtgtcctgaacaccttgatctctcacaccatgagtggagtcacaacatgtctgagg
ttccctgggcagctcaatgctgacctgcgcaaactggctgtcaacatggtgccatttgcc
cgtatgcacttcttcattcctggtcttgctccactgattagcagggacatccagccatac
cttgctctcactgtgcctgaattaatccggcagatgttcgatgccaagaacatgatggct
tcttgcgatccacgccacggccggtacctcacggtggctgccattttccgtggcagcgtg
tccacaagggatgtggaaatggggatgatcgatgtgcagaacagatatagcagaaacttc
attgactggatccccaacaacgtgatgatagctgtgtatgacatcccaccccatggcgtg
aagatggccgccaccttcattgcgaacagcaccgctatccaggagctgttcattcgcctc
tctacacagttaatgtccatgttcagacacaggagatacctgcactggtacacagctgag
ggtatggatgaaatggagttcacagaggctgagagcaacatagccgacctagtatcagac
taccaggcataccaggatgcaactggtgacgatgaaggagagtttgaggaggaggaaggg
gaggaggtgccgtaa

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