Ictalurus punctatus (channel catfish): 108268622
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Entry
108268622 CDS
T04658
Name
(RefSeq) gamma-aminobutyric acid receptor subunit alpha-4
KO
K05175
gamma-aminobutyric acid receptor subunit alpha
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu04080
Neuroactive ligand-receptor interaction
ipu04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
108268622
04082 Neuroactive ligand signaling
108268622
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ipu04040
]
108268622
Ion channels [BR:
ipu04040
]
Ligand-gated channels
GABA-A
108268622
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Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
Zip
Motif
Other DBs
NCBI-GeneID:
108268622
NCBI-ProteinID:
XP_017329167
Ensembl:
ENSIPUG00000020334
UniProt:
W5U7S3
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Position
8:9016579..9060510
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AA seq
558 aa
AA seq
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MQKMVSAKKETVIAMCPTYISTLFYFLCVTACIKRISGQVKRDEKLYPENFTKILDQLLE
GYDSRLRPGFGGPVTEVKTGIYVTSFGPVSDVEMEYTIDVFFRQTWEDRRLRYEGPIEIL
RLNNLMVTKVWTPDTFFRNGKRSVAHNMTAPNKLFRIMKNGTILYTMRLTISAECPMKLV
DFPMDGHSCPLKFGSYAYPKTEMIYTWTKHSVEVPPESSSLVQYDLIGQTVSSETVKSIT
GEYVVMTVYFHLKRKMGYFMIQTYIPCIMTVILSQVSFWINKESVPARTVFGITTVLTMT
TLSISARHSLPKVSYATAMDWFIAVCFAFVFSALIEFAAVNYFTNVQAERAKKKAAKNAV
TAAANSSIPSGKGKDTKEILQQNSDTNGNLRKRVNSTTQSQPDPKGSQRNESCSRSSMAV
SKELQTSQLSSSSSATDSPSGQTRPHPKSFTQSKALIPASASKTTPPAPPSVPTVPELSS
ANTPTSSGSLHHLLVPKLENMQKTETKATSSAQPAASMGGASKIDKYARILFPVSFGAFN
MVYWVVYLSKDTMEAKGA
NT seq
1677 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaagatggtctcggccaagaaggagacggtgattgcaatgtgccccacttacatc
tccacactcttctactttctgtgcgttacggcttgcattaagagaatctcaggtcaggta
aagagggatgagaagttataccccgaaaatttcaccaagatcttagaccaacttctggag
ggttatgacagcagactgcgccctggattcggcggtccggtgactgaggtgaagactggt
atctacgttactagttttggcccagtatctgatgtggaaatggagtacacaatagatgtg
tttttccgacagacgtgggaggaccggaggttgaggtatgagggaccaatcgagattttg
cgactaaacaacctaatggtgaccaaagtgtggactccggataccttcttcaggaacgga
aaaagatctgtggctcataatatgactgcaccaaacaaactcttccgcataatgaaaaat
ggcacaatcctttacaccatgaggctgacaatcagtgcagagtgtccaatgaagctagtg
gattttcctatggatggccattcctgtccacttaagtttggcagctatgcttaccctaag
actgagatgatctacacatggaccaagcactctgtggaagttcctcctgaatcatccagc
cttgttcagtatgatctgattggacaaactgtctccagtgaaacagtcaaatctattaca
ggtgaatatgtcgtgatgactgtctatttccacttgaaacggaaaatgggctacttcatg
attcaaacgtacatcccatgcatcatgacagtaatcctttcccaagtgtctttctggata
aataaggaatctgtgcctgccagaactgtcttcggtatcaccacagttctcaccatgacc
actctgagcatcagcgcccgtcattctctgcctaaggtctcctatgctacagccatggac
tggtttattgccgtgtgtttcgccttcgttttttcggccctcatcgagtttgctgctgtg
aactatttcaccaacgtgcaagcggaacgagcgaagaagaaagcagccaaaaatgctgtc
actgcagctgccaacagctccataccatcaggcaagggcaaggacactaaggagattcta
cagcaaaactcagacactaatggcaacctacgcaaacgtgtaaactccacgactcagtct
cagcccgaccctaagggcagccaaagaaatgaatcctgcagcaggagctctatggctgtt
tccaaagagctccagacaagccaattatcctccagctcaagcgcaacagacagcccctca
ggccaaacacgaccccatcccaaatccttcacccaatccaaagcactcattccagcttca
gcttccaaaaccactccccctgctccgccttcagtgccaacagtccctgagctctcgtca
gccaacacacccaccagctctggttctcttcaccatcttctagtcccaaagttggagaat
atgcagaaaacagaaaccaaggccacatccagtgctcagcctgcagcttctatgggcggg
gcaagcaagattgataagtatgcacgcatccttttcccagtctcctttggggcatttaac
atggtgtactgggtggtatacttatccaaagacacaatggaagcaaaaggagcctaa
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