Ictalurus punctatus (channel catfish): 108268623
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Entry
108268623 CDS
T04658
Name
(RefSeq) gamma-aminobutyric acid receptor subunit alpha-2
KO
K05175
gamma-aminobutyric acid receptor subunit alpha
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu04080
Neuroactive ligand-receptor interaction
ipu04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
108268623
04082 Neuroactive ligand signaling
108268623
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ipu04040
]
108268623
Ion channels [BR:
ipu04040
]
Ligand-gated channels
GABA-A
108268623
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
DUF7205
Motif
Other DBs
NCBI-GeneID:
108268623
NCBI-ProteinID:
XP_017329168
Ensembl:
ENSIPUG00000020363
UniProt:
A0A2D0RF66
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All DBs
Position
8:9079652..9138615
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AA seq
455 aa
AA seq
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MREKLFTFHRLVFCISLTLFCGTRSVSADTSTDAFKNNITLFTRILDRLLDGYDNRLRPG
LGDRVTTVKTDIYVTSFGPVSDTDMEYTIDVFFRQSWKDERLKFEGPMNILRLNNLMASK
IWTPDTFFHNGKKSVAHNMTMPNKLLRIQDDGTLLYTMRLTVHAECPMHLEDFPMDFHSC
PLKFGSYAYTTTEVTYTWTKNASNSVVVEGESSRLNQYDLLGQTVGNETIKSSTGEYTVM
TAHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPARTVFGVTTVLTMTTLSISA
RNSLPKVAYATAMDWFIAVCYAFVFSALIEFATVNYFTKRGWAWDGKSVVNDKKKEKASV
IKKNNAYAVAVANYAPNITKDSVLPTIAKGGVAEAGKAKTESKPAENKKTFNSVSKIDRM
SRIMFPVLFGTFNLVYWATYLNREPVIKDMVPSNQ
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atgagggagaagctgttcacgtttcaccgcttggtgttctgcatctccttaacgctattt
tgtggtacaaggtcagtaagtgcagacacctcaacggatgccttcaaaaacaatatcacc
ctcttcacacgcatcttggacagactcctggatggctatgataaccggctcaggcctgga
ctaggagatcgggtcaccacagtgaagactgatatctacgtcaccagttttgggcctgtt
tcagacactgatatggaatacacaatagatgtgttcttcaggcagagctggaaagatgag
aggttgaaatttgagggaccaatgaacatcctgcgtctcaacaacctgatggccagcaaa
atctggactccagacacattctttcataatgggaagaaatcagtggcacacaacatgacc
atgcctaataagctcctgcgtatccaggatgatggcactctgctttacaccatgaggttg
acggtgcatgctgagtgtccaatgcatcttgaggactttcccatggatttccactcctgt
cctctcaaatttggcagctatgcctacacaacaacagaggtaacgtacacctggacaaag
aatgcctcaaactcggtggtggtggagggggagagctcccgattaaaccagtatgattta
ctgggacagactgtaggcaatgagacaattaaatccagcactggcgagtacacagtgatg
acagctcacttccatctgaagaggaagattggatattttgtgattcagacgtacctcccg
tgtatcatgacagtcatcctatcacaggtctcgttttggctcaatcgtgagtctgtgcct
gccaggactgtgtttggtgtgacgactgtactgaccatgacaactctgagtattagtgcc
cgtaactcactacctaaagtggcctacgccaccgccatggactggtttatcgccgtgtgc
tacgcttttgtcttctcagctctcattgaatttgctacagtcaactatttcaccaaacgt
ggctgggcctgggatggcaagagcgttgtcaacgacaagaagaaggagaaagcctccgtg
attaagaaaaacaacgcatacgcagtggctgttgcgaactacgctcccaacatcaccaag
gactctgtcctgcccaccatcgctaaaggtggagttgcagaagcaggcaaggccaaaact
gagagtaaaccagccgagaacaagaaaaccttcaacagcgtgagtaagatcgaccgtatg
tcccgcatcatgttccctgtgctcttcggaaccttcaacctggtttattgggccacctat
ttaaacagagaacccgttatcaaggacatggtcccctccaaccaatga
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