Ictalurus punctatus (channel catfish): 108268706
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Entry
108268706 CDS
T04658
Symbol
stx3b
Name
(RefSeq) syntaxin 3b isoform X1
KO
K08486
syntaxin 1B/2/3
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
108268706 (stx3b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ipu04131
]
108268706 (stx3b)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ipu04147
]
108268706 (stx3b)
Membrane trafficking [BR:
ipu04131
]
SNARE
Syntaxin (Qa)
Stx-PM
108268706 (stx3b)
Exosome [BR:
ipu04147
]
Exosomal proteins
Exosomal proteins of epithelial cells
108268706 (stx3b)
Exosomal proteins of other body fluids (saliva and urine)
108268706 (stx3b)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Syntaxin
SNARE
Syntaxin_2
Relaxase_C
EzrA
MSC_0620_UU052
FlaC_arch
DUF6584
Spectrin_Anc-1_2
PI_PP_C
Baculo_PEP_C
FUSC
Spectrin_Anc-1
GlpR
STX6_10_61_N
ArAE_1_C
IL2
DUF8045
Motif
Other DBs
NCBI-GeneID:
108268706
NCBI-ProteinID:
XP_017329307
Ensembl:
ENSIPUG00000015637
UniProt:
A0A2D0RFI7
LinkDB
All DBs
Position
8:complement(25089881..25116703)
Genome browser
AA seq
289 aa
AA seq
DB search
MKDRLEQLKATCDHDDEDVSIAVVNEGFMDDFFTQIEEIRKGIDKIDENVAEVKKLYSVI
LSAPTSDQKTQDELEALTNDIKKMANNARNKLKTIERELETGEEERVSADMRIRKSQHAV
LSRKFVDVMTKYNEAQVDFRDKSKGRIQRQLEITGRVTTDEELEEMLEGGNASVFTAGIV
DSGISKQALSEIESRHKDIVRLESSIKELHDMFVDIAMLVESQGDIIDNIEANVSKSVDH
VAAAKIETKKAVRYQTKARKKVVIIVCVVLVLLAIIALIIGLSVGLKRA
NT seq
870 nt
NT seq
+upstream
nt +downstream
nt
atgaaggaccgcctggagcagctgaaggcgacgtgtgaccatgacgacgaggacgtgtcg
atcgctgtggttaacgaagggttcatggatgatttttttacacagattgaagaaatcaga
aaaggcatcgacaagattgacgaaaatgtagctgaagtgaagaaactttactccgttatt
ctgtctgcgccgacatctgatcagaaaacacaagatgagctggaggcccttaccaatgac
attaagaaaatggccaacaacgcacgcaacaagctgaagactattgagagggaacttgag
acgggcgaagaggagagagtgtccgctgacatgagaatacgcaaatcacagcatgcagtt
ctctccaggaagtttgtggacgtgatgacaaaatacaacgaagctcaggtggacttcaga
gacaagagcaaaggacgcatccagagacagttagagatcactggtagagtcactactgat
gaagagctggaggaaatgctggaggggggcaacgcatcggtcttcaccgccgggatcgta
gattcgggaatctccaagcaggcgttgagcgagatcgagtctcgtcacaaagacatcgta
cggctggagagcagcataaaggaactgcacgacatgttcgtggacatcgccatgctcgtc
gagagtcagggtgacatcatcgataacatagaggcgaatgtgtcaaaatcagtggatcat
gttgcagcagcaaagattgaaacaaagaaagcagtcaggtatcagaccaaagcccggaag
aaagtggtgattatagtgtgcgttgtattggtgcttcttgccattatcgctttgataata
ggactgtctgtaggacttaaaagggcgtaa
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