Ictalurus punctatus (channel catfish): 108268717
Help
Entry
108268717 CDS
T04658
Symbol
chrnb5b
Name
(RefSeq) neuronal acetylcholine receptor subunit beta-2
KO
K04813
nicotinic acetylcholine receptor beta-2
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu04080
Neuroactive ligand-receptor interaction
ipu04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
108268717 (chrnb5b)
04082 Neuroactive ligand signaling
108268717 (chrnb5b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ipu04040
]
108268717 (chrnb5b)
Ion channels [BR:
ipu04040
]
Ligand-gated channels
Acetylcholine (nicotinic)
108268717 (chrnb5b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Neur_chan_memb
Neur_chan_LBD
DUF2417
Motif
Other DBs
NCBI-GeneID:
108268717
NCBI-ProteinID:
XP_017329329
Ensembl:
ENSIPUG00000018582
UniProt:
A0A2D0RFL5
LinkDB
All DBs
Position
8:complement(27283589..27293481)
Genome browser
AA seq
486 aa
AA seq
DB search
MAPRMEKGLWLLFLTTALCAEVEERLINNLLSPERYNKLIRPAVNKSQQVTIAIQVSLAQ
LISVNEREQIMTTNCWLTQVWNDYRLMWNPDEYEGVMKVRLPSQHIWLPDIVLYNNADGT
YEVSFYSNAVVSSNGEVAWLPPAIYKSACKIEVRNFPFDQQNCTLKFRSWTYDHTEIDLV
LLSDFASRDDFKPSGEWDIVSLPGRKNEDPDDFTYLDITYDFIIRRKPLFYTINLIVPCV
LITSLAILVFYLPSDCGEKITLCISVLLALTVFLLLISKIVPPTSLAVPLIGKYLMFTMV
LVTFSIVTSVCVLNIHHRSPSTHTMPPWVKSFFLNHLPALLFMQRPGSSNIREKFRRKHQ
HRSFSENTLKREQDALSDSTFFVNEDSKTLSRRNREMQDNTEIRKRLAVKCSADMEMAVE
GVRYIADKIKSEDDDEAIIEDWKYVAMVIDRLFLWIFVLVCVSGTVGLFMQPLVNSYNTQ
LDDNTE
NT seq
1461 nt
NT seq
+upstream
nt +downstream
nt
atggctcctcggatggaaaaaggactttggctgcttttcctcaccacggcgttgtgcgct
gaggtggaggaacgattaattaataacctcctttctcctgaacgctacaacaagctcata
cgaccagcagtgaacaagagccagcaggtgaccatcgccatccaggtgtctctagctcag
ctcatcagtgtgaatgaaagggaacagattatgaccaccaactgctggctcactcaggtg
tggaatgattaccgattaatgtggaacccagacgagtacgaaggtgtcatgaaagttcgt
cttccgtcacagcacatatggctgccagacatcgtcctctacaataatgcggacgggact
tacgaggtgtctttctactccaacgccgtcgtgtccagcaatggtgaggttgcttggttg
cctccagccatctataaaagtgcgtgtaagattgaggtgcgaaactttccattcgaccaa
cagaactgcacactgaagttccgctcttggacgtacgaccacacagagattgacctggtc
ttgctgtccgacttcgcaagccgcgatgacttcaaacccagtggtgagtgggatattgtg
tctcttcccggtcgcaagaatgaagacccagatgacttcacttacctggatatcacttat
gacttcatcatcaggcgcaagccgcttttctacaccatcaacctgatcgttccgtgtgtt
cttatcacatctctggccatcttggttttctacttgccctcggactgtggagagaagata
accttgtgtatctcagtcctcttggccctaactgttttcctccttctcatctccaagatt
gtgcctccgacctcactggctgtgccactcattggcaagtatctgatgttcaccatggtg
ctggtgaccttctccatcgtcaccagcgtgtgcgtgctaaacattcatcaccgctctccg
agcacacacaccatgccaccgtgggtcaagagcttcttcttgaatcatctgccagcgttg
ttgttcatgcaaaggcctgggtcgtccaacatccgtgagaaattccggcgcaagcaccaa
catcgctcgttctctgagaacactcttaaaagagagcaggacgctctgtcggattccacg
ttctttgtgaatgaggactccaaaaccctcagccggaggaatagagaaatgcaggataac
acagagatccggaaacggctagcagtgaagtgctcagcggatatggagatggctgtggag
ggcgtgagatacattgctgacaagataaagagcgaggatgatgacgaagcgatcattgag
gactggaaatatgtggcgatggtaatagaccgactcttcctgtggatctttgtgttggtt
tgcgtttctggaactgttggcctcttcatgcagcctctggttaatagctacaacactcaa
ttggatgacaacaccgagtga
DBGET
integrated database retrieval system
