Ictalurus punctatus (channel catfish): 108268795
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Entry
108268795 CDS
T04658
Symbol
nup62l
Name
(RefSeq) nucleoporin 62 like
KO
K14306
nuclear pore complex protein Nup62
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
108268795 (nup62l)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ipu03019
]
108268795 (nup62l)
Messenger RNA biogenesis [BR:
ipu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
108268795 (nup62l)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nsp1_C
DUF3189
Exonuc_VII_L
Laminin_II
Motif
Other DBs
NCBI-GeneID:
108268795
NCBI-ProteinID:
XP_017329480
Ensembl:
ENSIPUG00000015683
UniProt:
W5UIJ4
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All DBs
Position
8:complement(3568785..3579261)
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AA seq
512 aa
AA seq
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MSFNFAQSSTGGFNFGAAKTTASASTTPGFSMQTGGLTAGAFPFGAVSQPQAPAGTSQIA
GLLAQTTTSTAASQGGFSFGTPSQSSTAGGGFNFGGAPKLGLGLTPASQPATTAVTLGGL
MTSTTSSSGSGFAFGAAPTQTAAPTQQSTGGFSFPGAKVQAPAATSAQSTPSFSLGGQST
GLTLGAPAPAPAASSIGSNFGIKPAATPAPASTAAASQAASMSSLFASPMPSATSTVFNL
GGSTTAAAPAASSAAPVSTGLTLKPLGAATTTAATTAAASTAATAGFSLSLKPAISAAPA
ASIAASTAALTTSAAPVMSYAQLESLINKWSSELEDQERHFLQQATQVNAWDRMLVENGE
KITSLHKDMEKVKLDQRRLDQELDFILSQQKELEDLLAPLEESVKEQSGTIYMQNADEER
ERTYKLAENVDAQLKRMSQDLKEIIEHLNTSNGLADTSDPLQQICKILNAHMDSLQWVEQ
NSVLLQRRVEEVSKLCESRSKEQEKSFRLSFQ
NT seq
1539 nt
NT seq
+upstream
nt +downstream
nt
atgtcattcaactttgcacaaagttctacgggtgggtttaactttggagccgctaaaacc
acagcgtcggccagcacaacccccggcttctccatgcagacgggcggtcttacagcagga
gcattccccttcggagcggtgtcgcagcctcaggccccagcgggaacatctcaaattgca
gggctcctcgcacagaccaccacaagcactgcagcctcacaaggtggattcagctttggt
acaccatcacagagtagcactgctggtggtgggtttaattttggcggggctccaaaacta
ggtctcggcctgactccagcctctcagccggccactacagcggtgactttgggaggcctg
atgacttccaccacctcgtccagtggctcaggcttcgcattcggagctgccccgactcag
accgcagctccaacccagcagagcacaggaggtttcagctttcccggggccaaggttcag
gctcctgctgcaacttcagcacagagcactccttccttctcattgggagggcagagcaca
ggtctgactctgggagctcctgctccagcccctgcagcctcgtccatcgggagtaacttc
gggatcaagcctgcagccaccccagctccagccagcactgctgccgcaagccaggctgcc
tccatgtcatctctgtttgcttcccctatgccctcggctacctctaccgtattcaacttg
ggtggctcgacaactgcggcagccccagcagcatcgtctgcagctccagtctccactggc
ctgacactcaaaccattaggagctgcgaccaccactgctgccaccacagctgccgctagt
acagcggccaccgcgggcttttcgctgagcctgaaacctgccatctctgctgcaccggcc
gcttctatagccgcgtccactgctgcattaactaccagcgctgcaccagtgatgtcatat
gcccagctcgagtccctgatcaacaagtggagctcagagttggaggaccaggagagacac
ttcctgcagcaggccactcaggtcaacgcctgggaccgcatgctggtggagaacggagaa
aagattacatctctgcacaaggacatggagaaggttaaactggaccaaagaaggttggat
caggagttggactttattctgtcccagcagaaggagctagaggatcttcttgctcctttg
gaggagtcggtgaaggagcaaagtggaaccatctatatgcagaatgctgatgaggagcga
gagagaacgtataagttggcagaaaacgttgatgctcagctaaagagaatgtcgcaagat
ctgaaggagatcatcgagcacctcaacacatccaacgggctggccgacacgagcgacccg
ctccagcagatctgcaaaatcctcaacgcacacatggactccctgcagtgggtcgagcag
aactccgttctgcttcagaggcgtgtcgaggaggtgtccaagctgtgcgagagccgcagt
aaggagcaggagaagagctttcgtctcagttttcaatga
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