Ictalurus punctatus (channel catfish): 108268797
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Entry
108268797 CDS
T04658
Symbol
pls3
Name
(RefSeq) plastin-3
KO
K17336
plastin-3
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ipu03400
]
108268797 (pls3)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ipu04812
]
108268797 (pls3)
04147 Exosome [BR:
ipu04147
]
108268797 (pls3)
DNA repair and recombination proteins [BR:
ipu03400
]
Eukaryotic type
Check point factors
Other check point factors
108268797 (pls3)
Cytoskeleton proteins [BR:
ipu04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Others
108268797 (pls3)
Exosome [BR:
ipu04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
108268797 (pls3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CH
EF-hand_7
EF-hand_1
EF-hand_6
EF-hand_8
CAMSAP_CH
EF-hand_5
EF-hand_FSTL1
DUF5580
Motif
Other DBs
NCBI-GeneID:
108268797
NCBI-ProteinID:
XP_053538331
Ensembl:
ENSIPUG00000015787
UniProt:
W5UTB0
LinkDB
All DBs
Position
8:complement(3593101..3622722)
Genome browser
AA seq
627 aa
AA seq
DB search
MAAKISKDELEELREAFGKVDLDSNGYINDYELHDLFKEANLPLPGYKVREIIQKLMIEG
DKDKDNRISFDEFVSIFQELKSSDIAKTFRNAINKKEGILAIGGTSELSSAGTQHSFSEE
ERFAFANWINTALEKDPDCKHVLPVNPTTNNLFKAVGDGIVLCKMINLSVPDTIDERTIN
KKKLTPFTAQENLNLALNSASAIGCHVVNIGALDLREGKPHLVLGLLWQIIKIGLFADIE
LSRNEALAALLREGETLEDLMKLSPEELLLRWANFHLHNAGWQKINNFSSDIKDSRAYFH
LLNQIAPKGTKEGEERIDISMAGFNEKDDLKRAEAMLQQAERLGCRQFVTPTDVVSGNPK
LNLAFVANLFNKYPALTKPENQDIDWGLLEGETREERTFRNWMNSLGVNPHVNHLYGDLQ
DALVILQLYERIKVHVDWNNKVNKPPYPKIGSNMKKLENCNYAVDLGKTTAKFSLVGIGG
QDLNDGNPTLTLALVWQLMRRYTLNVLEDLGEGEKVNDDIIVNWVNKTLAGAGKKTKISS
FKDKEISSSLPVLDLIDAIQPGCVNYELVKTGSLAESDKLDNAKYAVSMARKIGARVYAL
PDDLVEVKPKMVMTVFACLMGRGMKRA
NT seq
1884 nt
NT seq
+upstream
nt +downstream
nt
atggcagcgaagatatccaaagacgagctggaggagctgcgcgaagccttcgggaaagtc
gatctggacagtaacggctacatcaacgactacgagctccatgaccttttcaaagaggcc
aacctgccccttcctgggtacaaagtccgtgagatcatccagaagctgatgatcgagggg
gacaaagacaaggacaacaggatcagcttcgatgaatttgtttcaatcttccaggagctt
aaaagtagcgatattgcaaagaccttccgcaatgctatcaacaagaaagagggcatcctg
gccatcgggggcacgtcagagctgtccagtgcaggcacgcagcactccttctcggaggag
gagaggtttgcgtttgctaactggatcaatactgccttggagaaagacccggactgcaaa
cacgtgctgccagtgaaccccaccacaaacaacctcttcaaggctgtaggcgatggcatc
gtgctgtgtaaaatgatcaacctgtccgtccctgatacaatcgacgagaggacaataaac
aagaagaaactgacgccgttcacagcacaggagaacctcaacctggcgctgaactctgct
tcagctatcggctgccacgtggtgaacatcggcgctctggatctgcgcgaaggaaagccg
catctggtgctgggcctgttgtggcagatcatcaagatcggcctgttcgcagacatcgag
ctcagcaggaacgaggcgctggcagcgttgctgcgggaaggcgagacccttgaggatctg
atgaaactttccccagaggagttgctcctgcgatgggcgaacttccatctgcacaacgcc
ggctggcagaaaatcaacaatttcagctccgatattaaggactccagggcgtatttccat
ctcctgaaccaaattgcacccaaaggcactaaagagggcgaggaacgcatagacatcagc
atggccggcttcaatgagaaagacgacttgaaaagggcagaggctatgctgcagcaggct
gagagacttggctgcagacagtttgtcacgcccactgacgtggtgtctggaaaccccaaa
cttaacctggcgtttgtggccaatctctttaacaagtatccagcactgaccaaacctgag
aaccaggacatcgactggggcctgctggagggtgaaaccagagaggagagaactttccga
aactggatgaactccctgggtgtgaaccctcatgtcaaccacctatatggtgatctccaa
gatgcgctggtcatcctgcagctctacgagaggatcaaggttcacgtcgactggaacaat
aaagtcaacaagccgccttacccgaagatcggctcgaacatgaagaagctggagaactgc
aactacgctgtggacctggggaaaactacagccaaattttcactggtgggcattggaggc
caagatctcaacgatgggaaccccaccctgaccctggctctggtctggcagttaatgaga
agatacactctgaacgtcctcgaggacctgggagagggagagaaggtgaacgacgacatc
atcgtcaactgggttaataaaactttggcaggggcaggaaagaagacaaagatttcaagc
tttaaggacaaagagatcagctccagcttgccagtgttggaccttatagacgccatccag
ccaggctgcgtcaactacgagctagtaaaaaccggcagcctggcagagagcgacaagctg
gacaacgctaaatatgctgtatccatggccaggaagatcggcgcgcgtgtgtacgcactg
cctgatgacctggtggaggttaagcccaaaatggtcatgaccgtgttcgcttgcctgatg
ggtcgaggaatgaagagggcgtaa
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