Ictalurus punctatus (channel catfish): 108268799
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Entry
108268799 CDS
T04658
Name
(RefSeq) synaptotagmin-like protein 4
KO
K17598
synaptotagmin-like protein
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ipu01009
]
108268799
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ipu04131
]
108268799
Protein phosphatases and associated proteins [BR:
ipu01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
108268799
Membrane trafficking [BR:
ipu04131
]
Exocytosis
Calcium ion-dependent exocytosis
Synaptotagmins
108268799
Small GTPases and associated proteins
Rab associated proteins
108268799
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C2
FYVE_2
FliT
Motif
Other DBs
NCBI-GeneID:
108268799
NCBI-ProteinID:
XP_017329484
Ensembl:
ENSIPUG00000017973
UniProt:
W5U824
LinkDB
All DBs
Position
8:complement(6236582..6259222)
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AA seq
690 aa
AA seq
DB search
MVQAMETINMSFLTDSERELILGVLNRDEELRRLEEQRVKRLKAELLDIRRKGAKRSNGN
YSEHSCGRCQEPLGRLAANTNQCPVCKHKVCRNCRTVRANGFWLCSVCAKEADIKKSTGD
WFYDQRVNRFSTAPGHDLVRASIRKRPPTKKRETTGEVLLNSPDLNSSQTLPVPRPRLKD
LALGNKSPSSKHLQQSNTDLAENASLCSSRADSDSLSSTPSTQRNEGVNRLSGTDSTVLS
MSSPIKTHSPSGSSASTETSSLVHQINTCPESLNDDDGLFKKSVRRVHKISDFKPVSVVD
VRYDMTENTAASMGDRSKSVPGLNIDEEEEEEDIDNLVSIHRRTVGEGTTNLRGSSGTLG
SMMSVYSEAGDYDIVDVSGDIVFSLHYDERMQSLSVLVKECRGLAYVAKKKCNPYVKSYL
LPDKSRQSKKKTAIKRNTINPSYNERLKYSISRSQLMSRTLQLSVWHHDRFGRNAFLGEV
EIPMDCHDIDSGQEECVTLQGKVGNSLTLSAFSQYKGELVISLKYVTETKAAGEKPRGKK
AKVEDGGELHVLIKEAKNLCAMKAGGTSDSFVKGYLLPSTGKSSKKKTQVVKKTVNPHYD
HTFIYKDVCLEYLKGMCLELTVWDREAMSSNDFLGGVRLSSGAVRLKEGKQEWVADSTGE
EVSLWQKMMQFPDSWAEGSLPLRSSMGTRE
NT seq
2073 nt
NT seq
+upstream
nt +downstream
nt
atggtgcaagctatggagaccatcaacatgtccttcttgacagactctgagagggaactg
atcttaggggtgctgaatcgggatgaagagctgagacggttagaggaacagcgggtgaag
agactgaaagcagagttgttggacatcaggagaaagggagcaaagcgcagcaatggcaat
tacagtgagcacagctgtggacgctgtcaggagcccctaggccgtctagctgccaacact
aaccagtgcccagtgtgcaaacacaaagtgtgccgaaactgtcgtactgtccgagccaat
gggttctggctgtgcagtgtgtgtgccaaagaggcggacataaagaagtctacaggtgac
tggttctatgatcagagggttaaccgtttttccacagctcctggacatgatctagtacga
gcctcaatcaggaagcgacctccaacaaagaagcgtgaaaccacaggggaggttctgttg
aacagtccagatttgaactccagccaaactttaccagtaccacggcccagactgaaggat
cttgctctaggaaacaaaagcccatccagtaagcatctgcagcagagcaacacagacttg
gccgagaatgccagcctctgcagtagccgtgctgacagcgactcattgtccagcacgccg
tcgacacagaggaacgagggagtgaacaggttgagtggaacagattccactgtgttaagt
atgtcctctcccattaaaacccacagtccttctggatcctctgcaagcaccgagacttca
tctttagttcatcaaattaatacatgcccggagtccttgaatgatgatgatggccttttc
aagaaaagtgttagaagagtgcacaaaatatcagattttaagccagtctctgtagtggac
gtacgctatgatatgactgagaacaccgcagcctccatgggagacagaagcaagtcagtt
ccaggtctaaacatagatgaagaggaggaggaagaggatattgataacttggtcagcatt
cacagaaggactgtgggtgaaggcaccaccaatctgcgtggctccagtggtacgctgggc
agcatgatgagtgtatacagtgaggcaggggattacgacattgtggacgtcagtggggac
attgtcttctccctccactatgatgagagaatgcagagtctctcagttctggtcaaagag
tgcagaggtctagcttatgttgccaaaaagaagtgcaacccctatgtcaaaagttacctc
ctcccagacaaatctcgtcagagcaagaagaaaacggctatcaaacgtaacacaatcaac
cccagctacaatgagagattaaagtattcaatcagtcgctcccagctgatgtctcgtact
ctccagctctcagtgtggcatcatgaccgttttgggcgcaatgctttccttggggaggtg
gagataccaatggactgccatgacattgactcaggccaagaggagtgtgtgacactccaa
ggaaaggtgggcaactctttgacactgtcagctttttcccagtacaaaggagaacttgtg
atttctctaaagtatgtcactgagacgaaggcagctggagaaaagccccgaggcaaaaag
gccaaagtagaggatggtggagagctgcacgtgttaataaaggaggctaagaatctttgt
gcaatgaaagcagggggcacgtctgattcctttgtgaaagggtacctgctgccatctaca
ggcaagtcgtccaagaagaagacgcaggtggtgaagaagaccgtgaacccacactatgac
cacacattcatatacaaagatgtgtgtctggagtatctaaaaggcatgtgtctggagctc
acagtctgggatcgagaagccatgtccagcaacgattttctgggaggagtgcgtttgagt
tcaggggcagttcgactgaaggaggggaagcaggaatgggtggctgactcaacaggagag
gaagtgtctttgtggcagaagatgatgcagttcccagattcttgggcagagggcagtctc
cccctgcgctcctccatgggaacgagagagtaa
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