Ictalurus punctatus (channel catfish): 108268858 Help Entry 108268858         CDS       T04658                                  Name (RefSeq) THO complex subunit 2 isoform X1   KO K12879   THO complex subunit 2 Organism ipu  Ictalurus punctatus (channel catfish) Pathway ipu03013   Nucleocytoplasmic transport ipu03040   Spliceosome Brite KEGG Orthology (KO) [BR:ipu00001]  09120 Genetic Information Processing   09121 Transcription    03040 Spliceosome     108268858   09122 Translation    03013 Nucleocytoplasmic transport     108268858  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:ipu03019]     108268858    03041 Spliceosome [BR:ipu03041]     108268858 Messenger RNA biogenesis [BR:ipu03019]  Eukaryotic type   mRNA surveillance and transport factors    Transport factors     TREX complex      108268858 Spliceosome [BR:ipu03041]  Complex C   Other components    EJC/TREX     108268858  Other splicing related proteins   Spliceosome associated proteins (SAPs)    TREX complex     108268858 SSDB OrthologParalogGFIT Motif Pfam:  Tho2 THOC2_N Thoc2 Motif Other DBs NCBI-GeneID:  108268858 NCBI-ProteinID:  XP_017329623 Ensembl:  ENSIPUG00000015876 UniProt:  A0A2D0RGG0 LinkDB All DBs Position 8:3649818..3715158 Genome browser AA seq 1552 aa AA seqDB search MAALILPTDWIKNWEKSGKNDFLQLCRDLAGKADEEVFLKDLQMALYELCWHVVHGGLKV DVAASLLADVMELREEMPSILADVFCVLDIETGCLEEKHKRDHFIQLVGACLCCVSEAVL KERLDPDTLESLGLIKQAQQFNQKIVKIKTKLFYKQQKFNLLREENEGYAKLVTELGQDL SGNVTSHLVLESIKSLIGCFNLDPNRVLDIILEVYECRSDQDEFFIPLIKSYMCEHQTLC HILGFKFKFHQEPNGETPSSLYHVAAALLQHHLIALEDLYVHLLPVDSSIVEEHKREILE AKQIARKLTMVVVPSEKSDDKEKEKDKEEEKNEKPPNNQKLGLLEALLQIGDWQHAQSIM EQMPPFYATSHKSIAVALCQLLHLIVEPLYRRAGVPKGAKGCVLNLLRNRQAPGPVESFE DLCKDVFTMLGYLGPHLSHDPILFAKIVRLGKSFMKEYHSESKQDAKEKMDTLLSCFLSI ADQVLLPSLTLMDCNACMSEEIWGFFKLFPYHHRYRLYGQWKNETYSNHPLLVKVKAQTV DRAKYIMKRLTKENVKPSGRQIGKLSHSNPTILFDYILSQIQWYDNLITPVVDSLKYLTS LNYDVLAYCIIEALANPEKEKMKHDDTTISSWLQSLASLCGAVFRKYPIELGGLLQYVTN QLKAGKSFDLLILKEVVQKMAGIEITDEMTAEQLEAMTGGEQLKAEGGYFGQIRNTKKSS QRLKDALLDHELALPLCLLMAQQRNGVVFSEGGEKHLKLVGKLYDQCHDTLVQFGGFLAS NLSTDDYIKRVPPIDVLCNRFHSPHDAAFFLSRPMYAHQIMAKYDELKKAEKGNRQQQKV HKYIAACEQVMAPVHEAVVSLHLPRVWDDLRPQFYATFWSLTMYDLSVPHSAYDREVNKL KMQIKAIDENTEMPLNKKKKEKERCTALQDKLQEEEKKQLEHVQRVLHRLKLEKDNWLLA KSTKNETITKFLQLCLFPRCVFSAIDAVYCARFVELVHQQKTPNFCTLLCYDRVFSDIIY TVASCTENESRRYGRFLCCMLETVTRWHSDKAIYEKECGNYPGFLTIFRASGFDGGNKAD QLDYENFRHVVHKWHYKLTKASVHCLETGEYTHIRNILIVLTKILPFYPKVLNLGQALEC RVHKICQEEKEKRPDLYALAMGYSGQLKSRKAHMVPENEFHYKEPASTANPGALQNGPGS SGKPGTAAPASANAGKNEEGAAEDTEKSKDKSQVAQKTACKNPTAANKASSNGSSTPNSI KGSKEKEDKEKSVKEKKEKKEKTVAGTPEAKAGGKEKQQKEEKAGDAKDKVPKAEKDKRK DDKKDEKSKSDAKAADKESSKERDVAKEGKLKESSKGEKNAASLKSPVPRSDGIESEREQ KRRKLDTHSSPSHSSAVKDNLNDFKDSAAKQHHANNSTSLTKSEAEKKESDKSGDRSKER DKKEDRKDRKRDYSNSDREMSQESKRRKDENGTSSSKHSKSASPPDSPRSNDKDNGKRSK STSKDKSDLAKTDKASGGKKESRHDKEKSEKKRDSTGAKEDKKHHKSSEKHR NT seq 4659 nt NT seq  +upstreamnt  +downstreamnt atggcggcgctgatcctccctactgattggatcaaaaactgggaaaaatccggaaaaaat gacttcctgcagctgtgtcgggacctggcggggaaagccgacgaggaagtgttccttaaa gatcttcagatggccctgtacgagctctgctggcacgtggtccacggcggtctcaaggtt gacgtggccgccagcctcctggctgatgtaatggaactgcgggaagaaatgccttctatt ttagccgatgttttctgtgtgttagatatcgagactggatgtttggaggagaaacacaag cgtgaccattttatccagctggtgggagcgtgtctgtgttgtgtttctgaagctgtcctg aaagagaggctcgaccccgacacgctcgagtccctcggcttgatcaagcaggcgcagcag ttcaaccagaagattgtcaaaatcaagaccaagctgttttacaaacagcagaagttcaac ttgttgcgcgaggagaacgaaggctacgccaagctcgtgacagagctgggccaggacctc tcaggaaacgtcaccagccatctcgtcctggagagcatcaagtctttaataggatgtttc aacctggacccgaaccgcgtgttggacatcattttggaagtgtacgagtgccgttcggac caggacgagttcttcatccctctgatcaagtcgtacatgtgtgagcaccagaccctgtgc cacatcctgggcttcaagttcaaattccatcaggaaccgaacggagaaaccccgtcgtct ctgtaccacgtcgccgctgcccttctccagcaccatctcatcgcactggaggatctctac gtacatctgctcccagtggactccagcatcgtggaagagcacaaaagggagatcctggag gccaagcagatcgcccgcaagctcaccatggtggtggtgccctcggagaagagcgacgat aaggaaaaggagaaggacaaagaagaggaaaagaacgaaaagcctcccaataaccagaaa ctgggcctgctcgaggcgctgctgcagatcggagactggcagcatgcacagagcatcatg gagcagatgccacccttctacgccacctcgcataaatccattgctgtggcattgtgccag ctgctgcacctcatcgtggagcctctttaccgcagggccggcgtccctaaaggcgccaaa ggctgcgtgttgaacctgctgaggaacaggcaagccccgggtcccgtcgagagcttcgag gatctctgtaaggatgtgttcaccatgctgggttacctgggcccgcacctctcccacgac cccatcctgttcgccaagatcgtacgtctgggaaaaagcttcatgaaagagtaccacagt gaaagcaagcaagatgccaaggagaaaatggacacgctgctcagctgtttcctcagcatt gctgaccaggtgctgctgccttcgctcacgctcatggactgcaacgcctgcatgtcagag gaaatctggggcttctttaagctgttcccttaccaccacaggtatcggctttacgggcag tggaagaacgagacgtacagcaaccacccgctgttggtaaaggtgaaggcccagacagtg gacagagccaagtacatcatgaagcgactgaccaaggaaaacgtgaagccatcagggagg cagattggcaagctgagccacagtaaccccaccattctctttgattacattctctcccag atccagtggtatgacaaccttatcacccccgtggtggattctctgaaatacctcacctct ctcaactatgatgttctggcttattgcattatcgaagctttagctaacccggagaaagag aagatgaagcatgacgacacgactatctcgtcctggcttcaaagtctcgccagcctttgt ggagcggttttccggaaataccctatcgagttgggaggtttgctgcagtatgtgaccaat cagctgaaggcggggaagagttttgacctgttgatcctgaaggaggtggtgcagaagatg gccgggatcgagatcacagacgaaatgacagcggagcagctggaggccatgaccggagga gagcagcttaaagcagagggaggatacttcggccagatcaggaacacaaagaagtcatct cagcgcctgaaggacgccctgctggatcacgagctggctcttcctctctgcctgctgatg gctcagcagaggaacggcgtggttttctccgagggaggggagaaacacctgaaactagtg ggcaaactctacgatcagtgtcacgacacgctggtgcagtttggcggctttttagcgtcc aacctgagcacggacgactacatcaagagggttcctcccatcgacgtgctctgtaaccgg ttccactctcctcatgacgccgcgttcttcctgtcccgcccgatgtacgcccatcagatt atggccaagtacgacgagctgaagaaggccgagaagggaaaccggcagcagcagaaggtc cacaagtacatcgcggcgtgcgagcaggtgatggcgcctgtgcacgaagccgtcgtctcg ctccacctacctcgcgtatgggacgacctgcgtccgcagttctacgccaccttctggtca ctcaccatgtacgacctgtccgttccccatagcgcctacgaccgggaggtcaacaagctc aagatgcagatcaaggccatcgacgagaacaccgagatgccgctgaacaaaaagaagaag gagaaggagcgatgcactgcgctgcaggacaagctgcaggaggaggagaagaagcagctg gagcacgtgcagagggtcctacaccgcctcaagctggagaaggacaactggttactcgcc aaatcgaccaagaacgagaccatcactaaattcctccagctctgtctgttcccgcgctgc gtcttttcagccatcgacgccgtgtactgcgctcgcttcgtcgaactcgtgcaccaacag aaaacgccaaacttctgcacactgctttgttacgatcgcgtgttctctgatatcatctac acagtggcgagctgtacagagaacgagtctcggcgttacggccgtttcctgtgctgcatg ctggagacggtgacgcgatggcacagcgataaagccatctacgagaaggagtgtggcaat tacccagggttcctgaccattttccgagccagtggctttgacggaggaaataaagcggac cagctcgactacgagaacttcagacacgtcgttcacaaatggcattacaagctgactaaa gcttcagtgcactgcctggagacgggcgagtacacccacattcgcaacatcctcatcgtg ctgaccaagatcctgcccttctacccgaaagtgctgaacctgggccaggcgctcgagtgc cgagtgcacaagatctgccaagaggagaaggagaagaggcctgacctctatgctttagcc atgggctactctggccagttgaaaagcaggaaagctcacatggtgcccgagaacgagttc cactacaaggagccggcgagcaccgccaaccccggcgccctgcagaacggcccgggcagc tccggcaagcctggcaccgccgcccctgcctccgccaacgctgggaaaaacgaggaggga gctgccgaggacacggagaaatccaaggacaaatctcaggtggctcagaaaacagcctgc aaaaacccgaccgcggcgaataaagcgagcagcaacggcagcagcacacctaacagcatc aaagggagcaaagagaaggaggacaaggagaagagcgtgaaggagaaaaaggaaaagaag gagaagaccgttgccggcactccagaggccaaggcaggagggaaggagaagcagcagaag gaggagaaagcgggtgacgccaaggacaaggtgcccaaggctgagaaggacaagaggaag gatgacaagaaggacgagaagagcaagagtgacgcgaaggctgcagacaaagagtcatcc aaggagcgagacgtggccaaggagggcaagctaaaggaaagcagcaagggcgagaaaaac gctgcgtccctcaaatcccccgttcccagatcagacggaatcgagtctgaacgggaacaa aaaagacgaaagctcgacacacactcttcgccctcacactcctctgcagttaaggacaat ctcaacgacttcaaggactcagccgccaagcagcatcacgccaacaacagcacgagcctg accaagagcgaagccgagaagaaagagtccgacaaatccggggaccgctccaaagagagg gacaagaaggaggacaggaaggaccgcaaacgagactactccaacagcgaccgcgagatg agccaggaatccaagcgccgtaaagacgagaacggaacaagctcctcaaagcacagtaag agcgccagtccgcctgattcgccccgctccaatgacaaggacaacggcaaacgctccaaa tccaccagcaaagacaagagcgatctagccaaaaccgacaaggcctctggaggcaaaaag gaatccaggcacgacaaagagaagtctgaaaaaaagcgcgacagcaccggtgcgaaagaa gacaagaaacaccataaatcatctgaaaagcacagataa

DBGET integrated database retrieval system