Ictalurus punctatus (channel catfish): 108268860 Help Entry 108268860         CDS       T04658                                  Symbol pcdh1b Name (RefSeq) protocadherin-1 isoform X1   KO K16498   protocadherin delta 1 Organism ipu  Ictalurus punctatus (channel catfish) Pathway ipu03273   Virion - Lassa virus and SFTS virus Brite KEGG Orthology (KO) [BR:ipu00001]  09120 Genetic Information Processing   09125 Information processing in viruses    03273 Virion - Lassa virus and SFTS virus     108268860 (pcdh1b)  09180 Brite Hierarchies   09181 Protein families: metabolism    01009 Protein phosphatases and associated proteins [BR:ipu01009]     108268860 (pcdh1b)   09183 Protein families: signaling and cellular processes    04515 Cell adhesion molecules [BR:ipu04515]     108268860 (pcdh1b) Protein phosphatases and associated proteins [BR:ipu01009]  Protein serine/threonine phosphatases   Phosphoprotein phosphatases (PPPs)    Protein phosphatase-1     PP1-interacting proteins (PIPs)      108268860 (pcdh1b) Cell adhesion molecules [BR:ipu04515]  Cadherins   Protocadherins    108268860 (pcdh1b) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Cadherin Protocadherin Cadherin_CELSR2_9th Cadherin_2 Cadherin_4 PDGLE Motif Other DBs NCBI-GeneID:  108268860 NCBI-ProteinID:  XP_017329631 Ensembl:  ENSIPUG00000004175 UniProt:  A0A2D0RHK8 LinkDB All DBs Position 8:31098668..31236211 Genome browser AA seq 1200 aa AA seqDB search MSRSVMDSVMSSWAPLFLVLLFFFLSPSLSSIMYHLREEQPPNTLVGSLASDQGLPDSGH LYKLEVGAPYLRVDGKTGDIFTTEVPIDRETLKDCRNLFEGDPCFLEFEVSITDLMKGSG PRLIEGRIEIQDENDNTPQFSSPILSISIPENTLVGALFSIPVATDKDTGSNGIADYSLT TGPDAASLFSLQVAENADEKVPQLIVMGTLDREQRDSYDLNIKVVDGGNPPRYSSALLRI TITDTNDNVPKFERTHYEGELAENSPTGHSVLQVKANDADVGDNGAVTYIIYQPPSTVQR LLSIDRNTGIIFVKGPVDREDVSLLKFYVQAKDNGPQSKSSKVLVTITVKDRNDNPPLIR IRGFALVAHEDGIANISEDMPVGTPVALVEVTDRDEGENAVVTCVVAGDVPFQLRSASDT GSRRKYFLQTTTPLDYERVKEYRIEIVAVDSGNPALSSTNSLKVQVTDVNDNAPVFSPSM YEVDFPEENQPGDKVLDVVATDADSGTNAELTYSIILDSAIKGLFEINRNTGEVRVMDQL DREYRERYEFQVEASDKGVPSMRGTATVVVNVLDRNDNDPKFMLGGYSFSVLENLPALSP VGMVTVMDVDKGENAQVHLSVEPDNGKFVIQNGTWTILSRISFDREKESTYTFRLKAVDG GDPPRSSYVGITINVLDENDNAPYITKPSNSSYKFLPPLTSPDTRVEKVEAEDIDTGLNA ELEYTIMGGNPHGLFRISPTDGEITLVKEFTRKHNGLHRLVVTVSDKGKPAKHTTALVHI FVNETIGNITLLESLVGHSLYTPLDRDIAGDPEYSVQQSNIMYGSLAGIAGVILVIVVVV VIRHRLQKEAKSGYQAGKKESKDLYTPKQGTKSSKSKKSKKGKAPKPAKSLEEDGEASLQ KGLKFNLMSDNDSPRIHLPLNYPPGSPDLGRHYRSNSPLPSIQLQPQSPSASKKHQAVQD LPAANTFVGTGDSNSTGSDQYSDYSYKTNPQKYSTKQLPHRRVTFSTANQAQDLQDSSQH SYYDSGLDESETPSSKSSSGPRIGPLALPEDHYERTTPDGSIGEIEHPENDLRSLPDVAM TGNCTRECSEFGHSDSCWMPSPNRNNKISKSASKLSTFVPYQEREPQEPLMANGSPKPMG EELGGGATNKMPNIRFMAPYTSAYSAGGEGAKECTMEEIPLSQTAATTPSSQGSKREIYL NT seq 3603 nt NT seq  +upstreamnt  +downstreamnt atgtcccgcagcgtgatggactcggtgatgtcgtcttgggcgccacttttcctcgtcctc ctgttcttcttcctctccccctctctcagctccatcatgtaccacctgcgggaggagcag ccacccaacacactcgtgggcagtttagcgtcagatcagggacttcctgattccggtcac ctgtacaaactggaggtgggcgccccctacctgcgggtggacgggaagacgggcgatatt ttcaccacagaggttcccatcgaccgcgagacactgaaagactgtcgcaacttgttcgag ggtgacccatgcttcctggagttcgaggtttccatcacggatctgatgaaaggctccggc ccgcggctcattgaaggccggatcgagattcaagatgagaacgataacacgccgcagttc tcttcacccatcctgtccatatccattcctgaaaacacccttgtgggggcgctgttctcc atccccgtagccaccgataaggacacgggcagtaacggaatcgcagattactcactaacg acgggtcccgacgcagcgtcgctgttcagcctgcaggtggcagagaatgcggatgagaaa gttccacagctgatcgtgatggggactttggaccgtgaacagcgtgactcatacgatctc aacattaaagtggtggacggtggaaatcctccacgctacagtagcgctctcctgaggatc accattaccgacaccaacgataacgtgcccaaattcgagcgcacgcactatgaaggggaa cttgctgagaacagtcctacgggtcactccgtcctgcaggtgaaggccaatgatgctgac gtgggagataacggcgcggtcacatacattatctatcagccaccgtccactgtgcagcgc ctcctcagcattgaccgaaacaccggcatcatcttcgtcaaaggtccagttgaccgcgag gacgtgagtctgctcaaattctacgtccaggccaaagacaacggcccacaatccaagagc tccaaagtcctggtgaccatcacagtgaaggacaggaacgacaacccaccgctcatcagg atccgcggatttgccctggtggctcacgaggatgggattgctaacatttctgaggacatg cctgtggggactccagtggctcttgtggaagtgacggatcgagacgagggtgaaaatgca gtggtgacttgtgtggtggccggagatgtaccgttccagcttcgttccgcatcagacaca ggaagtcggaggaagtatttcctgcagaccacaacaccactggattatgaacgggtcaag gaatacaggattgagattgtagctgtggattcagggaacccagctctttccagcaccaac tcgctaaaggtccaagtcacagatgtgaatgataacgctccggttttctccccgtctatg tatgaggtggactttccagaggagaatcagccaggcgataaggttttggatgtagtggcc actgatgcagacagtggcaccaatgctgagctcacatacagtattatcttagactcggcc atcaagggactctttgagatcaaccgtaacacaggagaggtccgagtgatggaccagtta gaccgtgaatacagagaacgctatgagtttcaggttgaagcatctgataagggggttccc agcatgaggggaactgcaacagttgtggttaatgtactcgaccgcaatgacaacgatccc aagttcatgctaggtggctacagtttctctgtcctggaaaacttgcctgcactcagtcca gtgggaatggtgacggtcatggatgttgacaaaggtgaaaatgctcaggttcacttatcg gtagaaccagacaatggcaagtttgtgattcagaatggcacatggactattctctcgaga atttcctttgatcgggaaaaggaaagcacctacaccttccgtctaaaagctgttgatgga ggtgatcctcctcgttcctcttatgtgggaattacaataaatgtcctagatgaaaatgat aatgcgccttacatcaccaaaccttccaactcctcatacaagttccttcccccactgaca agcccagatacacgtgtggagaaagtggaagcagaggacattgacacgggattgaacgct gagttagagtacaccatcatgggtggaaaccctcatggactcttccgcatttctccaacc gatggtgagattacgcttgtcaaagaattcactcggaagcataacggcctccaccgcctg gtggtaacggtcagtgacaaggggaaacctgccaagcacacgacggcgctggtccacatc tttgtaaacgagacaatcggaaacatcacactgttggaatcgctagtcggccacagcctc tacactcctctggatagggacattgctggagacccagaatactccgtccagcagagcaac atcatgtacggaagccttgcagggattgccggggtcatcctggtcattgtggtggtggtt gttatccggcaccgtctgcagaaggaagccaaaagtggataccaagcaggaaagaaagag tccaaagatctttacacacccaagcaaggaaccaaaagcagcaagagcaaaaagagcaag aagggcaaggctccaaaaccagcaaagtccttggaggaggacggggaggcaagtcttcag aaaggcttgaaattcaacctgatgagtgacaatgatagtcccaggattcatctgcccctc aattaccctcccggaagccccgatttggggagacactaccggtcaaactcccctttgccc tccattcagctgcagccgcaatccccttcagcttccaaaaagcaccaggctgttcaggat ctcccggctgcaaacaccttcgtagggaccggagacagcaattccaccggttctgatcag tattcggattacagctacaagaccaaccctcagaaatacagcaccaaacagctgccgcac cgccgtgtgaccttctcgacagctaatcaggcgcaggatctgcaggactcctcccagcac agttactacgacagtggactggacgaatcagaaacaccgagcagtaaaagttcttcagga ccgaggattggaccactggcgctgcccgaggatcactacgagaggacgactccagacggc agcatcggagagatcgaacaccctgagaacgatctgaggtcgcttcccgacgtggcgatg acggggaactgtactcgtgagtgcagtgagttcggacactcagattcctgctggatgccg tcaccaaaccgcaacaacaaaatctccaagagcgcatcgaaactctccaccttcgtgcct taccaggagcgggagcctcaggagccgctgatggccaacggaagccccaagcccatgggg gaggaactcgggggcggggccaccaacaaaatgcccaacatccgcttcatggccccttac actagtgcctactccgcaggtggcgagggtgcgaaggagtgcaccatggaggaaatcccg ttgagtcaaacggcagcaaccacgccctccagccagggctccaagcgagagatctacctg tga

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