Ictalurus punctatus (channel catfish): 108268895
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Entry
108268895 CDS
T04658
Symbol
ehd1a
Name
(RefSeq) EH domain-containing protein 1a
KO
K12483
EH domain-containing protein 1
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
108268895 (ehd1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ipu04131
]
108268895 (ehd1a)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ipu04147
]
108268895 (ehd1a)
Membrane trafficking [BR:
ipu04131
]
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
108268895 (ehd1a)
Exosome [BR:
ipu04147
]
Exosomal proteins
Proteins found in most exosomes
108268895 (ehd1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF5600
Dynamin_N
EH
EHD_N
MMR_HSR1
GTP_EFTU
EF-hand_1
EF-hand_7
Roc
AAA_16
EF-hand_5
AAA_22
Gtr1_RagA
AAA_28
TsaE
AIG1
EF-hand_6
PIN_5
Motif
Other DBs
NCBI-GeneID:
108268895
NCBI-ProteinID:
XP_017329712
Ensembl:
ENSIPUG00000002819
UniProt:
A0A2D0RGP4
LinkDB
All DBs
Position
8:16011349..16024298
Genome browser
AA seq
534 aa
AA seq
DB search
MFSWSSRNGKKEPELFQNVSEGLKRLYRHKLFPLEDTYRFHDFHSPALEDADFDNKPMVL
LVGQYSTGKTTFIRHLMEQDFPGMRIGPEPTTDSFIAVMYGEQEGVIPGNALVVDPKKPF
RKLNAFGNAFLNRFMCAQMKNPVLESISIIDTPGILSGEKQRISRGYDFAAVLEWFAERV
DRIILLFDAHKLDISDEFSEVIKALKNHEDKMRVVLNKADQISTQQLMRVYGALMWSLGK
IINTPEVVRVYIGSFWAQPLHVPDNRKLFEAEEQDLFRDIQSLPRNAALRKLNDLIKRAR
LAKVHAYIITSLKKEMPSVFGKDNKKKELIANLGAIYEKIEREHNISPGDFPNLKKMQEL
LGGQDFAKFPALKPKLLEAVEDMLANDIAKLMALVRQEEAAMPSQVVKGGAFDGTMNGPF
GHGYGEGAGEGIDELEWVVARDKPSYDEIFYTLSPINGKVSGAAAKKEMLKSKLPNTVLG
KIWSLADVDKDGFLDDEEFALANHLIKVKLEGYELPAKLPTHLVPPSKRGQEQQ
NT seq
1605 nt
NT seq
+upstream
nt +downstream
nt
atgtttagctggtccagtaggaacgggaagaaggagccagagctttttcaaaatgtctcc
gaggggctgaagcgcctgtaccgccataagctcttccctctggaggacacctaccgcttc
cacgacttccactccccggcgctggaggatgccgacttcgataataagcccatggtgctt
ctggtcggtcagtattccaccgggaaaacgaccttcatccggcacctgatggagcaggat
ttccccgggatgcggatcggaccagagcccaccacggactcattcatagcggtgatgtac
ggcgagcaggagggagtcataccgggcaacgcgctggtggtggacccgaaaaaacccttc
cgaaaactcaacgccttcggaaacgctttcctcaacaggtttatgtgtgctcagatgaag
aaccctgttctagagagtatcagtatcatcgataccccaggcatcctgtcaggggagaaa
cagaggataagccgaggctatgactttgcggcggtactcgagtggtttgccgagcgagtg
gaccgcatcatcctgctgttcgatgcgcacaagctggacatctcggacgagttctctgag
gtgataaaagccttaaagaaccatgaagacaagatgcgtgtggtgttgaacaaagcagac
cagatcagcacacagcagctgatgagggtgtacggtgcccttatgtggtcactcgggaag
atcattaacacgccagaggtggtgcgggtctacattggctcgttctgggcacagccactc
catgtgccagataacaggaagctgtttgaggctgaggaacaggaccttttccgagacatc
cagagtcttccacgaaatgctgccttgagaaagctgaatgatctgattaagagggcacgt
cttgccaaggttcatgcttatatcatcacctctctaaagaaggaaatgcccagcgtgttt
ggcaaagacaacaagaagaaagaactgattgccaacctcggtgccatttatgagaagata
gagagagaacacaacatttctccaggggactttccaaacctcaagaagatgcaggaactc
ttgggtggccaagactttgccaagttccctgccttgaagcccaagctgctggaggctgtg
gaggacatgctggccaatgacatagccaagctcatggcacttgtgcgccaggaggaggca
gccatgccttctcaggtagtgaagggaggagcctttgatggcaccatgaatgggcctttt
ggccacggttacggagagggtgccggcgagggcatcgacgagctagagtgggtggtagct
cgtgacaagccatcctatgatgaaatcttctacactctctcacccattaacggtaaggtg
tcgggcgctgccgccaaaaaggagatgctgaaatcaaagttaccaaatacagtgcttggc
aagatctggagcctggctgatgtagataaagatggcttcctggatgatgaggagtttgcg
ctggccaaccatctgatcaaggtgaagctagaaggctacgagctgcccgccaagctgccc
actcacctggtgcccccatccaaacgtgggcaagagcagcagtga
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