Ictalurus punctatus (channel catfish): 108268908
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Entry
108268908 CDS
T04658
Symbol
tgfb5
Name
(RefSeq) transforming growth factor beta-2 proprotein
KO
K13376
transforming growth factor beta-2
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu04010
MAPK signaling pathway
ipu04060
Cytokine-cytokine receptor interaction
ipu04068
FoxO signaling pathway
ipu04110
Cell cycle
ipu04218
Cellular senescence
ipu04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
108268908 (tgfb5)
04350 TGF-beta signaling pathway
108268908 (tgfb5)
04068 FoxO signaling pathway
108268908 (tgfb5)
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
108268908 (tgfb5)
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
108268908 (tgfb5)
04218 Cellular senescence
108268908 (tgfb5)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
ipu04052
]
108268908 (tgfb5)
00536 Glycosaminoglycan binding proteins [BR:
ipu00536
]
108268908 (tgfb5)
Cytokines and neuropeptides [BR:
ipu04052
]
Cytokines
Transforming growth factors (RSTK binding)
108268908 (tgfb5)
Glycosaminoglycan binding proteins [BR:
ipu00536
]
Heparan sulfate / Heparin
Growth factors/receptors
108268908 (tgfb5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TGFb_propeptide
TGF_beta
CBM96
Beta-prop_RIG_2nd
Motif
Other DBs
NCBI-GeneID:
108268908
NCBI-ProteinID:
XP_017329739
Ensembl:
ENSIPUG00000022525
UniProt:
A0A2D0RGT1
LinkDB
All DBs
Position
8:complement(12545462..12553411)
Genome browser
AA seq
415 aa
AA seq
DB search
MWFINIALLILKLSVSAEGFSTCQSYDLDDHKSKRIEAVRGQILSKLRIRSPPDPAAAPQ
PESVPFEVMLLYNSTKDLLKERARHAESACERESSEEDYYAKEVQRVDMLPQRADSNVIN
TVPQSPHFRVVKFDVTSVDRNSSTLVKAEFRIYRVQNTHAQATEQRVEIYQILKSDDVSG
SHHRYIDSRTVQPGAKAAWLSVDVTETVKEWMAYKEKNLGLMLSVHCPCCTFIPSTNNIV
PNKSEELEARFAGVDDDLIRPNRRPGLTKGQIEFSTKTPHLILTLRPTDRLENPNKKNRK
KRAAADATTCSRNADQGCCLRSLYIDFRRDLNWKWIHEPKGYKANFCAGNCPYLWSADNH
YNMILPLYNKMNPEASASPCCVPQDLEPLTIVYFLGRTPRVEQLSNMVVKSCKCR
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atgtggttcatcaatatcgcgctgcttatcctaaagttatcggtctcggctgagggcttt
tcgacgtgtcagtcttatgacttggacgatcataagtcgaaaaggatagaggcggtgcgc
gggcagatcctgagcaagctgcgcatccgatcaccacccgaccccgcagccgccccgcag
ccggaatccgtgcccttcgaggtcatgctgctctataacagcaccaaggacctgctgaag
gagcgcgcgcgccacgccgagtccgcctgcgagcgcgagagcagcgaggaagattactac
gctaaagaggtgcagagagtggacatgctgcctcagcgcgccgactccaacgtgataaac
acagtgcctcagagtccacacttcagagtggtgaagtttgatgtcaccagtgtagacagg
aattctagcacacttgtcaaggcagagtttcgcatatacagggtgcagaacacacatgca
caagccacggagcagcgagtggaaatataccagattctgaaatctgacgatgtttcaggt
tcccatcataggtacatagattccagaactgttcagccaggagccaaggcggcgtggttg
tctgttgacgtcacagagactgtgaaagagtggatggcttataaagagaagaacttgggc
ctgatgctcagtgttcattgtccatgctgcacttttattccatccacaaataatattgtg
cccaacaagagtgaggagttggaagctcgatttgcaggtgttgatgatgacctgattcgc
cctaacaggaggccaggtctgactaaaggccagatagagttcagtactaaaacaccacac
ctcatattgaccctgcggcccacagatcgtttggagaaccccaacaaaaagaaccgcaag
aagagggcagctgctgatgctacaacatgctccaggaatgcagatcaaggctgttgctta
aggtctctgtacatcgacttccgtcgggacctaaactggaaatggatccatgaaccgaaa
ggatacaaagcaaatttctgtgctggcaactgcccctacttgtggagtgcagacaatcac
tataatatgattttgccgctttataacaaaatgaatcctgaggcgtctgcgtctccctgc
tgtgtgcctcaggacctggagcctctcactattgtttacttcctcggtcgaactccacgg
gtggagcagctgtcaaacatggtggtcaaatcctgcaaatgccgctga
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