Ictalurus punctatus (channel catfish): 108268914
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Entry
108268914 CDS
T04658
Name
(RefSeq) transcription factor E2F4
KO
K04682
transcription factor E2F4/5
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu04110
Cell cycle
ipu04218
Cellular senescence
ipu04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
108268914
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
108268914
04218 Cellular senescence
108268914
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ipu03000
]
108268914
Transcription factors [BR:
ipu03000
]
Eukaryotic type
Helix-turn-helix
Fork head/winged helix cell cycle-controlling factors, E2F
108268914
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Paralog
Gene cluster
GFIT
Motif
Pfam:
E2F_CC-MB
E2F_TDP
HTH_Cmi2_C
Motif
Other DBs
NCBI-GeneID:
108268914
NCBI-ProteinID:
XP_017329746
Ensembl:
ENSIPUG00000012416
UniProt:
A0A2D0RHX8
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Position
8:21435112..21449660
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AA seq
390 aa
AA seq
DB search
MDLDSGRNESGAMGESIQPATPSRHEKSLGLLTTKFVTLLQEAKDGVLDLKAAADTLAVR
QKRRIYDITNVLEGIGLIEKKSKNSIQWKGVGPGCNTREIADKLIDLKLELEDLDRREHE
LDQQRIWVQQSIKNVTDDSQNSPLAYVTHQDLCNCFKGDTLLAIRAPSGTQLEVPIPESV
VNGQKKYQIHLKSSSGPIDVLLVNKDPASASPVVLPVPPPEDMLQSLPASSVSAPSAPVA
APTAKPAGNSTTSTAVNNQRPANTTAAPATEAPSTAPSNTPANQNPLEESQQLQSSASLD
SSSSLPESSAVFEPIKADPSELLDLPKELSEMFDPTKEIMSADLLEELMSSEVFSPLLRL
SPPPGDHDYIYNLDETEGLCDLFDVPIANL
NT seq
1173 nt
NT seq
+upstream
nt +downstream
nt
atggatttggattctggacgaaacgaatcaggggcgatgggagaatcgatacagccggcc
acaccgagtcgccacgagaaaagccttggattattaaccaccaagtttgtcaccctgctg
caagaagccaaggatggagtgctggaccttaaagctgctgctgatacgctggccgtacgg
cagaaacggcggatatacgacatcaccaatgttctcgagggcatcgggctgattgagaag
aaatcaaagaacagcatacagtggaaaggtgtaggtcctggctgcaacacacgagagatt
gctgataagctgatagatctgaagctggagctggaagatctggacagaagagaacatgag
ctggaccagcagaggatctgggtgcagcagagcataaaaaatgtgactgacgactcacag
aacagccctctggcctacgtgacgcatcaagatctctgcaactgctttaagggtgacact
ctgctagcgatccgagcgccttcaggcacacagctggaggtgccgataccagagtctgtt
gtaaacggacaaaagaagtaccagatccacttaaaaagttcctcgggccctatcgatgtt
cttctggtgaataaggacccggccagcgcctctccggtcgtgttacctgttccccctccg
gaagacatgctccagagtctcccagcctcctcggtttctgctccatctgctcctgtcgct
gcccctaccgccaaacctgcaggcaacagtacaacaagtacagctgttaataaccagagg
cctgcaaacacgactgctgcacccgctacagaagcccccagcactgccccctcaaacaca
ccggccaatcagaatccactagaggagagccagcaacttcaatcctcagcctcgttggat
agcagctcgtcgcttcctgagtcctcggccgtctttgaaccaatcaaagcggacccttca
gagttgctggatctccctaaagaactttcagaaatgtttgatcctactaaagaaatcatg
agtgcagatctactggaagagctcatgtcatcagaagttttctctccactcctccgcctc
tcaccacctcccggcgaccacgactacatctataatctggacgagacagagggcctgtgt
gacctttttgacgtccctattgccaacctttga
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