Ictalurus punctatus (channel catfish): 108268932
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Entry
108268932 CDS
T04658
Symbol
ppargc1b
Name
(RefSeq) peroxisome proliferator-activated receptor gamma coactivator 1-beta isoform X1
KO
K17962
peroxisome proliferator-activated receptor gamma coactivator 1-beta
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
ipu03029
]
108268932 (ppargc1b)
Mitochondrial biogenesis [BR:
ipu03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Coactivators
108268932 (ppargc1b)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
Med25_SD1
Motif
Other DBs
NCBI-GeneID:
108268932
NCBI-ProteinID:
XP_017329789
Ensembl:
ENSIPUG00000001584
UniProt:
A0A2D0RGY5
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Position
8:complement(15096356..15140983)
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AA seq
872 aa
AA seq
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MHITLHLRNEKSPNVIHFAEKMSECSLDGCLKLADCLSASLLLPYRSSQTPQAGNVVAWD
WNLTLYGEEEVCSDRLDTDFPDFDLSQLDSDFDSVNCLSELNWCNDHSDSSPASIQYSAG
DTELFETEEENAALLAALTDSLDGIVEDGVGGLSVFPSLGEDPEEEEEDEEDELFLESEP
VQGSLSPETEDPSLLKKLLLSPPNVPVGLDSNRLSSALSKTQQLKSARPFLKRDRAYTVE
RKPRAFRPVGHLCTELQRHLTQEANTEDTHAADTEEEEEEEEDEDSDSEDEEGEDEGEEE
SSSSSEVESTMCAEPLEPQFPLEKERHSVVELIRYMHTYCVPSRKQASWDRKDRENVTRK
TKPENPAIPRNATSSCSKPATHPATLSNSSTSRGTKPKIPFVRRRETKAHSLLKELLEAV
ASFDVSKPYRLHSPPYSHSRTTAARPKAEHKDTSIIEGSQVAAKRSKWPEIDEGSFSVRR
SRRLASFPSRFAKRARSSGHSSEEESSVHHPAMDSPAEDSIEKADSQKSPETPNLCCNDE
KRACLCLPLTPKSTGDPSRPFEQNLCVELCGTAGLTPPTTPPHKPVEEELFKPEVKAELP
SKGMCPVRTHLRKLPEQTELYAQLRRMGPTGEIQSKGAYRDHDYCMLNLGESHKRIAAIL
PVPVCYTKVQEEEEDQMGEKNRQEETEAQQADLPPDFSPHQPAETGQPSPASSPTPEADA
ECPDSCRPPSPCHQINLSCESHCDKQSNITTHGQEEDGDKCQVLYIHNLPISVTQAVLRK
RFKAFGEPEDCRVLVKKEERCGVITFRQNQNEPSLKHRRHDSVGQYAGNGSRRFSRKRYI
DLDEAGPGPVKSKYDALDFDTLLKEAQRSLHR
NT seq
2619 nt
NT seq
+upstream
nt +downstream
nt
atgcacatcactctacatcttcgtaatgaaaagagcccaaatgtcatccactttgcagag
aaaatgagcgaatgcagccttgatggctgtctgaagctggcagattgtctctctgcttcc
ctgctcctcccttatcggtcatcccagacaccacaggcgggaaacgtcgtagcctgggat
tggaatctcacgctttatggggaggaggaggtgtgctcagaccgcctggacactgatttc
cccgacttcgacctctctcagctggacagcgactttgactccgtgaactgcctcagtgag
ctaaactggtgcaatgaccactcagacagctcccccgcctccatacagtacagcgcaggg
gacaccgagctcttcgagacggaagaggagaatgcggcgctgctcgccgctctcacagac
agcctggatggcattgtggaggacggggtgggggggctgtccgtgttcccctcgctgggt
gaagaccctgaggaggaggaggaggacgaggaagacgaactctttttggaaagtgagcct
gtccaaggctcgctgagcccagagacagaagacccgtctctactgaaaaagctcctgctg
tcccccccaaatgtgcctgtgggtctggactcaaacaggttgagcagcgcgctcagtaag
actcagcaactcaagtctgcccgtccttttctgaagagggacagagcatacacagtggag
aggaaaccgcgagcgttcaggcctgttggccatctctgcactgagctgcaacgccacctc
acccaggaggccaacaccgaggacacacatgcagctgataccgaggaggaggaggaagaa
gaggaagatgaggacagtgactcggaggatgaggagggggaggatgaaggagaagaggag
tcttcatccagcagcgaggtggagagtaccatgtgcgccgagccgctcgaacctcagttc
cccttggagaaggagcgtcactctgtggtggagctgatccgctacatgcacacgtactgt
gtaccatcacgcaagcaggccagctgggaccgcaaagatcgtgaaaacgtgacacgcaag
accaagcctgaaaaccctgcaattcctcgtaatgccacctctagctgttctaaacctgcc
actcaccccgcgaccctctccaacagcagcaccagtagaggaactaaacccaagattcct
tttgtacgccgtcgagaaactaaagcgcactctttgcttaaggagctgctggaggctgtc
gcttcctttgatgtgagcaagccttacagactgcacagccccccgtatagccacagcagg
accaccgcagcacggcccaaagctgagcacaaagacacgagcatcatcgaaggctctcag
gtggctgccaagcggtctaaatggcccgaaattgatgagggctcattttcggtgcgccgc
tcccgccgcttagcctccttcccaagccgatttgcaaaaagagcacgttcgagtggacac
tccagtgaggaggagagctcagtccaccaccctgccatggattcccctgctgaagacagc
attgagaaagcagactcccaaaagagccctgaaaccccaaacctctgctgtaatgacgag
aagcgtgcctgcctctgcctgccgctgactcctaaatccacaggagatccaagcaggccc
tttgagcagaatctctgcgtggaactgtgcggcactgcaggactcaccccacccacaaca
ccaccccataaacctgttgaagaggagctcttcaagcctgaggtcaaggccgaactcccc
agcaagggcatgtgtccagtgcggacacacctgcggaagcttccggaacagacggagctg
tatgcccagctgcggcgcatgggcccgacgggcgagatccagagcaagggcgcctacaga
gaccatgactactgcatgctaaacttaggggagagccacaaaaggattgctgccatcctc
ccagtacctgtctgctacaccaaggtccaggaggaagaggaggaccagatgggggagaaa
aacaggcaggaggagactgaggcccagcaggctgatttgcccccagacttctccccacac
caacctgcagagacaggacaaccctctcctgcctcctcacccactcccgaggctgatgct
gagtgcccagactcatgccggccaccttcaccctgccatcagatcaacctcagttgcgag
agccactgtgacaagcagagcaatatcactacacatggacaagaggaagatggggacaag
tgccaagtattgtacattcacaatctgccgatcagcgtcacacaggctgtcctgcgcaaa
cgcttcaaggcctttggcgaaccagaggactgccgggtgctcgtcaaaaaagaggagcgc
tgtggagtcatcacttttaggcagaatcagaatgagccgagtctgaagcacaggcgacat
gactctgtggggcagtatgctggaaatggcagtcggaggttcagcaggaagcggtacata
gatctggatgaggcaggaccaggcccagtgaagagcaagtatgacgctctggactttgac
actttgcttaaggaggcccagaggagtctacaccgctga
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