Ictalurus punctatus (channel catfish): 108268938
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Entry
108268938 CDS
T04658
Name
(RefSeq) NTF2-related export protein 2 isoform X1
KO
K14285
NTF2-related export protein 1/2
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu03008
Ribosome biogenesis in eukaryotes
ipu03013
Nucleocytoplasmic transport
ipu03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
108268938
03015 mRNA surveillance pathway
108268938
03008 Ribosome biogenesis in eukaryotes
108268938
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ipu03019
]
108268938
03009 Ribosome biogenesis [BR:
ipu03009
]
108268938
Messenger RNA biogenesis [BR:
ipu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
108268938
Ribosome biogenesis [BR:
ipu03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
108268938
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NTF2
NXF_NTF2
Mtr2
SnoaL_2
Motif
Other DBs
NCBI-GeneID:
108268938
NCBI-ProteinID:
XP_017329800
Ensembl:
ENSIPUG00000000517
UniProt:
A0A2D0RIQ8
LinkDB
All DBs
Position
8:12825394..12828807
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AA seq
143 aa
AA seq
DB search
MASTIDFRTHVDQSCRYSEEFVNIYYDCMDKKRRNLTRLYLDKATLVWNGNNVSGQDALG
EFFESLPSSEFQVHTLDCQPVHEQATQGQTTLLVVTAGTVKFDGSKQRYFNQNFLLTAQA
SPNSDQPVWKIASDCFRFQDWAS
NT seq
432 nt
NT seq
+upstream
nt +downstream
nt
atggcttcaacaatcgacttcaggactcacgtggatcagtcgtgcagatactccgaggag
tttgtcaacatttactatgactgcatggacaaaaaaagaagaaacctgacaaggctttac
ctggataaagccacactggtgtggaacgggaataatgtttcgggacaggatgcgcttgga
gaattttttgagtctcttccctcaagtgaatttcaggtgcacacactcgactgccagcct
gtccatgaacaagcgactcaaggccagacaacgttgctggtggtcaccgcgggcacagtc
aagttcgacgggagcaaacagagatattttaaccagaatttcctattaacggctcaggcg
tccccgaacagcgaccagccagtgtggaaaatcgcaagtgactgttttcgcttccaagac
tgggcaagctga
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