Ictalurus punctatus (channel catfish): 108268941
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Entry
108268941 CDS
T04658
Name
(RefSeq) rho guanine nucleotide exchange factor 6 isoform X1
KO
K05729
Rho guanine nucleotide exchange factor 6
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu04518
Integrin signaling
ipu04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04518 Integrin signaling
108268941
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
108268941
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ipu04131
]
108268941
Membrane trafficking [BR:
ipu04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
108268941
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RhoGEF67_u2
betaPIX_CC
RhoGEF
SH3_2
SH3_1
CH
SH3_9
RhoGEF67_u1
PH
SOS1_NGEF_PH
CENP-Q
DH_Alsin
Mis12
HAUS-augmin3
RHG20_PH
CAMSAP_CH
Motif
Other DBs
NCBI-GeneID:
108268941
NCBI-ProteinID:
XP_017329806
Ensembl:
ENSIPUG00000022134
UniProt:
A0A2D0RI37
LinkDB
All DBs
Position
8:complement(11789285..11828182)
Genome browser
AA seq
777 aa
AA seq
DB search
MNPEEQTVTWLISLGVLNSPKKNIADPEGFLKASLRDGVVLCKLMERLVPGSITKYCPDP
KCETDCIGNIREFLKGCVSLKVEGFEPESLYTGENFSKVLSTLSAVNIATQDRGTERPCP
QSSSSVPSLSISTSSISKSKSLRRQSKAVEMSENGAGSQLMVKARFNFKQNNEDELSFSK
GELIHVTRQEEGGWWEGMLNGKTGWFPSNYVREVKPCEKPISPKAVKGFDVPQLTKNYYS
VVVQDILEHEREFVKDLQTVLTCYLRPLQGSDKVSSAESSSLCGNLEEILTFQHGLCATL
EECSKMPEGQQRIGGCYMNMLCQIRMLYLSYCSSHPSAVAVLTDHSEELDKFMESQGASA
PGILTLTTSLSKPFMRLEKYPTLLQELERHVEEAHPDYSDIQKANIAFKNLVMQCQELRK
RKDLEVQILSEPVRGWEGDSMKSLGQVAYMSQVHVQSSSSEDKEERYFMLFPNVLIMLSA
SPRMSGFIYQGRLQLSGCTVTKHLDDAETSHYAFEIGGGMVERMTVFCNSSQELQEWLEH
LHAFTKGGSPVGTILKNVEGKPMSIVGTPSHLSHMQGFGTSTGTRCPLEPPKITKPWSLS
CLRPAPPLKPSAALGYKERMSYIMKDSSKSPKPIKKFLNKRKTERKASDDENLLRKSTVA
LEEDAQILKVIEAYCTGASLHQTTTAVRKDGVPPILLPEEEKIIVEEMKSNGQTITEEKS
LVDAVYALKDEVHELKKENRWMKQCLEEEQKSRKELERLVRKLAKQKNDYTWEDGGH
NT seq
2334 nt
NT seq
+upstream
nt +downstream
nt
atgaacccggaggagcagactgtaacctggctcatctcactcggagtgcttaattcccct
aaaaagaacatcgcggacccggagggatttctcaaagcatcacttcgagatggagtcgtc
ttgtgcaagcttatggagcgactggtaccgggatctattacaaagtactgtccagatcct
aaatgtgaaaccgactgcattggcaacattcgggagtttttgaaaggatgcgtctcttta
aaggttgagggttttgaaccagagagcttatacactggtgagaattttagcaaggttctg
tccacactgtcagcagtaaacatcgctactcaagatcgtggtactgagaggccatgtcca
cagtccagctcctctgttcctagtttgtcgatctcgacatcatccatctcaaagtccaaa
tccttgcgtagacaatcaaaagcagtggagatgtcagaaaatggagcaggtagccagctg
atggtgaaggcacgcttcaacttcaagcagaacaacgaggacgagctctcattcagcaag
ggcgagctgatccatgtcacccggcaggaggagggtggatggtgggaagggatgctcaat
ggcaagactggctggttccccagcaactatgtccgagaggtcaaaccatgtgagaaacca
atctcgcctaaagcggtgaaggggttcgatgttccacagctgaccaaaaactactacagt
gtggtggtacaagacatcctggagcacgagcgtgagtttgtgaaagacctccagacggtt
ctcacctgctatctgcgacctctacagggcagtgacaaggtttcaagtgcagagagcagc
agtttatgtgggaacttggaggaaatactcactttccaacatggactctgtgcgactttg
gaggaatgtagcaagatgcctgaaggccagcagcgcatcggtggctgttacatgaacatg
ttgtgccagatccgtatgctgtacctgtcctactgctccagccacccttctgcagtggct
gtactcactgaccacagtgaagagctggataagttcatggagagtcagggagccagtgct
ccaggcatcctgactctgaccaccagcttgagcaagcccttcatgaggctggaaaaatat
cccaccctactgcaggagctcgaaagacatgtagaggaagcccatccagattacagtgac
attcagaaagcaaatattgcttttaaaaatcttgtgatgcagtgccaggaactgcgaaag
cgaaaggacctggaggtgcagatactgtccgagccagtgcgtggctgggagggagacagc
atgaagtctctcggccaggtggcctacatgtcccaggtgcacgtgcagagcagctccagt
gaggacaaagaggagcgctacttcatgctgtttcctaatgtgctaattatgttgtctgcc
agcccacgaatgagtggctttatctatcagggacggctgcagctttcaggatgcacagtg
accaaacatttggatgatgcggagaccagtcattatgcgtttgagattggaggaggtatg
gtcgagcgcatgacagttttctgcaatagttcccaggagctgcaggaatggttagagcac
ctgcatgcttttaccaaaggtggaagtcctgttggaaccatcctgaagaatgtagaaggc
aagcccatgagtatcgtgggtacaccgtctcatctgagccacatgcagggctttggcaca
tccacgggcaccaggtgccctctggagccacctaaaattaccaagccgtggtctctgagc
tgcctgagacctgctcccccacttaaaccatctgccgccctgggctacaaagagaggatg
tcttatatcatgaaggattccagcaaaagccctaagcccatcaagaagttcctgaacaag
agaaagacagagagaaaagcctcagatgatgaaaatttgctcagaaaaagtaccgtagct
ttggaagaagatgcccaaattctgaaagtgattgaagcttattgcactggagccagccta
caccagaccacaacagctgtacgtaaggacggtgtccctccaattctgctaccagaggag
gagaagatcattgttgaagagatgaagagcaacggccaaacaatcactgaggagaaaagc
cttgttgatgctgtttacgcattaaaagacgaagtccatgagttgaagaaggagaacaga
tggatgaagcagtgtctggaagaggagcagaaatcccgcaaagagcttgagcgtttggtc
aggaagctggctaaacagaagaacgactatacgtgggaagacggaggccactaa
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