Ictalurus punctatus (channel catfish): 108268955
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Entry
108268955 CDS
T04658
Name
(RefSeq) ras-related protein Rab-13
KO
K06109
Ras-related protein Rab-13
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
108268955
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ipu04131
]
108268955
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ipu04147
]
108268955
04031 GTP-binding proteins [BR:
ipu04031
]
108268955
Membrane trafficking [BR:
ipu04131
]
Protein recycling
Rab GTPases and associated proteins
Rab GTPases
108268955
Exosome [BR:
ipu04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
108268955
Exosomal proteins of colorectal cancer cells
108268955
GTP-binding proteins [BR:
ipu04031
]
Small (monomeric) G-proteins
Rab Family
Rab8/10/13 [OT]
108268955
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ras
Roc
Arf
GTP_EFTU
Gtr1_RagA
SRPRB
MMR_HSR1
PduV-EutP
RsgA_GTPase
Septin
AAA
AAA_7
AAA_22
AAA_16
FeoB_N
TniB
Motif
Other DBs
NCBI-GeneID:
108268955
NCBI-ProteinID:
XP_017329836
Ensembl:
ENSIPUG00000003199
UniProt:
W5UKR5
LinkDB
All DBs
Position
1:complement(8257021..8268809)
Genome browser
AA seq
201 aa
AA seq
DB search
MAKKYDFLFKLLLIGDSGVGKTCLIIRFAEDNFNSTYISTIGIDFKVKTIEVEGKKVKLQ
VWDTAGQERFKTITTAYYRGAMGIILVYDITDDKSFENIQNWMKSIKENASAGVSRMLLG
NKCDIEAKRKVSKEIGEKLAKDHGIRFFETSAKSSINVEESFIALARDILVKSNTKPGSA
GREVRLTSTAPEKKASKCLML
NT seq
606 nt
NT seq
+upstream
nt +downstream
nt
atggcaaagaaatacgacttcctctttaaattgctgcttattggtgatagcggggtggga
aaaacatgtctgatcatccgttttgcagaggataattttaattctacatacatatcaact
atcggtattgactttaaagtgaagaccattgaggttgaagggaagaaagtcaagttacaa
gtctgggacacagcagggcaggagaggtttaagaccatcactacagcttattacagagga
gctatgggtatcatccttgtgtatgacattactgacgacaaatcctttgagaacattcaa
aactggatgaagagtatcaaagagaatgcatcagcaggagtgagtcgaatgctgctgggc
aacaagtgtgacatcgaagccaagagaaaggtgtctaaggagataggcgagaagctcgca
aaggaccatgggattcggttctttgagacaagtgcaaagtcaagcatcaatgttgaggag
tccttcattgctctggctcgagatatcttggtgaaatctaacacaaagccgggctcagct
ggccgtgaagtcagactcacaagcaccgccccagagaaaaaggcatccaagtgtcttatg
ttgtaa
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integrated database retrieval system