Ictalurus punctatus (channel catfish): 108268996
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Entry
108268996 CDS
T04658
Symbol
abcd3a
Name
(RefSeq) ATP-binding cassette sub-family D member 3a isoform X1
KO
K05677
ATP-binding cassette, subfamily D (ALD), member 3 [EC:
7.6.2.4
]
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu02010
ABC transporters
ipu04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
108268996 (abcd3a)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
108268996 (abcd3a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ipu02000
]
108268996 (abcd3a)
Enzymes [BR:
ipu01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.4 ABC-type fatty-acyl-CoA transporter
108268996 (abcd3a)
Transporters [BR:
ipu02000
]
ABC transporters, eukaryotic type
ABCD (ALD) subfamily
ABCD3 subgroup
108268996 (abcd3a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane_2
ABC_tran
SMC_N
AAA_23
AAA_21
BrxL_ATPase
AAA_29
AAA_27
Rad17
AAA_5
Motif
Other DBs
NCBI-GeneID:
108268996
NCBI-ProteinID:
XP_017329953
Ensembl:
ENSIPUG00000011349
UniProt:
W5U5M7
LinkDB
All DBs
Position
1:complement(18877103..18888627)
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AA seq
659 aa
AA seq
DB search
MAVISKYLTAKNSSIAGGVLLVLYLLRQRRRSSRLNSRKGSSELILNNEKDLKKDRAAVD
RVFFGRIMRILRIMVPRLFCKESWYLIMIAVMLVARTYCDVWMIQNGTMIESAIIGRSTK
DFKKYLFNFMRVMPLIALVNNFLKLGLNELKLCFRERLTKHLYDEYLKGYTYYKMGNLDN
RIANADQLLTQDVEKFCNSVVELYSNLSKPLLDIGLYIFKLTTAIGAQGPASMMAYLLIS
GLFLTRLRRPIGKMTVIEQKYEGEYRYVNSRLITNSEEIAFYNGNLREKQTIHSTFKKLV
DHLHNFIFFRFSMGMVDSIIAKYLATVVGYLVVSRPFLNMAHPRHLHSTHAELLEDYYQS
GRMLLRMSQALGRIVLAGREMTRLSGFTTRITELMKVLKELNTGKYERTMVSQSEKEADS
LEKLNLVPGSGRIIFMDNVIKFEHTPLATPNGDILIKDLSFEVKSGANVLVCGPNGCGKS
SLFRVLGELWPLFGGSLTKPERGKLFYVPQRPYMTLGTLRDQVIYPDTFEDQKKKGISDQ
VLKEYLDNVQLGHILDREGTWDTVQDWMDVLSGGEKQRMAMARLFYHKPQFAILDECTSA
VSVDVEDYIYSHCRKVGITLFTVSHRKSLWKHHEYYLHMDGRGNYEFKLITDETVEFGS
NT seq
1980 nt
NT seq
+upstream
nt +downstream
nt
atggcggttatcagcaaatacttgacagcaaagaattcttcgatagctggcggtgttctg
cttgttctgtatctacttaggcaaagacgaaggtcctccagactgaacagcaggaagggt
tcatcagaactgatcttgaacaatgaaaaagatcttaaaaaagatcgggcagctgtggac
agagtgttttttggccgaatcatgcgaatactcagaatcatggtaccgagactcttctgt
aaagagtcctggtacctgatcatgattgcagtgatgctggtggctcggacttactgtgat
gtttggatgattcagaatggcacaatgattgaaagtgcaattattggtcgctctacaaaa
gacttcaagaagtatttgttcaactttatgagagtcatgccccttatcgccctggtgaac
aactttctgaagttaggactgaatgaactgaagctctgtttccgtgaaagacttactaaa
catctatatgatgagtatctgaaaggatacacctactacaagatgggaaacctggataac
cgaattgccaatgctgatcagctgctgactcaggatgtggaaaagttctgcaacagtgtg
gtggagctatactccaatctcagcaaacctcttcttgacattggactctacatctttaag
ctgacaactgctattggggctcagggtcctgcttctatgatggcctacctgctgatctca
ggtctcttccttacgaggttgaggagacccatcggaaagatgacggtcattgagcagaaa
tacgagggcgagtaccgatacgtcaactcccggctcatcaccaacagtgaggagattgct
ttttacaatggaaatctcagagagaaacagaccattcacagtaccttcaagaagttggtt
gaccacttgcacaatttcatatttttccgcttctccatgggcatggtagacagcatcatt
gctaagtacttggccacggtagttggttatcttgttgtgagccgcccctttctaaacatg
gcacatccgaggcaccttcacagcacgcatgcggaactgctggaggattactatcagagt
ggccgcatgctactgcgcatgtcacaagctttgggcaggatcgtgcttgcaggtcgagaa
atgaccagactctcagggttcaccacccgtatcacagagctgatgaaggtcttgaaagag
ctgaacacagggaagtatgaacgcactatggtgtctcagtcagagaaagaagcagactcc
ttagaaaaacttaacctggtgcccggaagtggacgtatcatatttatggacaacgttatc
aagtttgaacatacacccttggcaacacccaatggagatattttgattaaggacctcagt
tttgaggtgaaatctggcgcgaacgttctggtgtgtgggcccaatggctgtggaaagagc
tcactctttagagtgctcggagaactgtggcctctgtttggtgggagcttgaccaaacct
gagagagggaagctcttctatgtccctcagaggccttacatgacacttggaacacttagg
gatcaggtgatctatcctgacacctttgaagaccagaagaagaaggggatttcagatcag
gtgctgaaagaatacctggacaatgtgcagctcgggcacattcttgaccgagagggcacc
tgggatactgttcaggactggatggatgttctcagtggtggagagaaacagagaatggca
atggctcggttgttctatcacaagcctcagtttgccattctagacgagtgcaccagtgct
gtaagtgtagatgtggaggactacatctacagccattgcaggaaggtgggcatcactctg
ttcacagtctctcatagaaagtctctctggaaacaccatgagtactacctccacatggat
ggaagagggaactatgagttcaaacttatcactgatgaaacggtcgagtttggctcttag
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