Ictalurus punctatus (channel catfish): 108268998
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Entry
108268998 CDS
T04658
Symbol
shank2b
Name
(RefSeq) SH3 and multiple ankyrin repeat domains protein 2b isoform X2
KO
K15009
SH3 and multiple ankyrin repeat domains protein
Organism
ipu
Ictalurus punctatus (channel catfish)
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Ank_2
Ank
Ank_4
SAM_1
SAM_2
Ank_5
Ank_3
SH3_2
SH3_9
PDZ_6
PDZ
SH3_1
FERM_f0
Motif
Other DBs
NCBI-GeneID:
108268998
NCBI-ProteinID:
XP_047013216
Ensembl:
ENSIPUG00000009192
UniProt:
A0A979EZ91
LinkDB
All DBs
Position
8:18850953..18988949
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AA seq
1805 aa
AA seq
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MPRSLMSSEEEMAQSFSDSSSSESDSLRDERPCVERPSSSRSDSFLICVVIPDLQQSRSM
RLKADCTVWAAKQQILCTLTQSLRDVLNYGLFQPAVDGRESAFLEEEKLLRDHLFPTSKD
VPTLEFRYKSRVYQHANVNEKQIEKLHTQANLKKFLEYIQHHQVDKVTNLLERGLDPNYH
DSDTGETPLTLAAHLDNMVEMITVLNSGGAHLDFRSRDGMTALHKAVRAKNQITLKAMLE
LGASPDYKDGQGLTPLYHTVTVGGDPSCCEMLLRAQATLTCHDENGWHEIHQACRYGHVQ
HLEHLLFYGADMRVQNASGNTALHICALYKQENCARVLLLRGASKEVKNYRGQTPFQVAI
IAGNFELAEYIKNHKDDSIVPFREAPAAVVSSGRSRPQQGQTGRSTLAAPRVLLRSNSDN
NLNVNKLSAPHTPSRSPSPSRSPSPSPLRSLSPRRPQQMQNSSNGTVKSMGRGARHPPRS
RSPSLGRLGDGDARRHPPQRHSSPRPGRDGFSGAETPGSKRRMYSAVPGRHYVVVKSYQP
QAEGEITLFKNDRVKVLSVGEGGFWEGSARGNVGWFPSECVEEIPNKPNEDRPYARADRS
ERRKLFRHYTVGSYDSFDASSDCVIDEKTVVLQKKDNEGFGFVLRGAKADTPIEEFTPTP
AFPALQYLESVDEGGVAWQAGLRTGDFLIEVNKDNVVKVGHKQVVNMIRHGGNHLIIKVV
TVSRNLDPDDTARKKAPAPPRRAPSTALSTRSKSMTSELEDLDKVEEVVPPQKPVWDNAN
VDVRVAAVKPRPTSRCFAVAPEMNSLCNSQDISVDSPPVTVTPKGPYLGVPKGTIRRQTS
IGVTEEEKQFLTPPMLKFTRSLSMPDTSEDIPPPPAISPPSPPHNNAPTSAGHGYGTIRP
GFTSQNPTVNSAPSDRGDSSLGSGWREQGMHYRENSEQYNVEAYSNSPTAQQSLHKRRAQ
IPENPYSDVGKMANAALFVPNKPARRKGMLVKQSNVEDSPEKTCSIPIPTIIIKEPSTSS
SGKSSQGSSMEIETTTPDHPGQLRPEDGLDTGSPFATAMAPSTAREKRLAVHRNSPSFRS
TDAGDEDVAPTPTPRLRHSKSIDEGMFSSDERLRRLMAPPSSLLSIPRGGGNVTDFNSPE
PTMVRELLNTRTGHSPISLPAHKTYSSGSGNYVHPVTGKPLDPNSPLALALAARDRAMRE
QSQPLPLKSDPSKLDLNKPLFIDTKLRSNVEVSFSSTATMGRPRGGLRRQMTESKYETES
KFQLDLGKAEKRAEEKKNMLIDIVDTSQQKSAGLLMVHTTDGAKTEENSLSEGERDEDVC
PDSTPGELRDPNQPAPAKPATPKPLSLPPKTMISVSSVDEPVKLPFGIPPPPLASVDIDE
EFVFAEPLPPPLEFANSFDIPEDQSGALSELLKQKSNGMSGPTLSPYYSHLTTSNSRDQE
IKRPTVLTNCTPPSFPTGPLEPYEPIIDSGIEVDSRSSGDPQLETTSTVSTVSSISTLSS
EGGETLDTCMVYADGQAFLVDRAQVLPKPKAKYAVNKSNALYKDALNEETISSFRVPSSI
PPPPLGTAPPEPLKTPTQRTSKLWGEPLDLKNPHGPETKPQGLTEINSVLQHVSKDKPPK
PGEALDSPPGCRTHFGLRNQDGVSLISGTQPNPSMSFTNQPGPNVPAPSPCRQAESLHHH
RHPSSPGITSPPPILSCSSSSSSLPAVSTTSSVQGRSRSPSPLSFLQAASGKPFASKAVL
SWTKQDVADWLESLNLAEHRDAFLENDIEGTHLPSLQKQDLIDLGVTRVGHRMNIERALK
LLLDR
NT seq
5418 nt
NT seq
+upstream
nt +downstream
nt
atgccgcgaagtctcatgtccagcgaggaggagatggctcagagtttctctgactcaagc
agctcggagtcggacagtttgagagatgagcggccgtgtgtggaacgaccgagtagcagt
cgcagtgactcctttctcatctgcgtcgttattcctgatctgcagcagtctagatccatg
aggttaaaggctgactgtacagtctgggcagccaaacagcagatcctctgcacactaacg
cagagcctgagagacgtgttaaactatggcctctttcagccggctgtggatgggagagag
agtgccttcctcgaggaggagaaactactgcgagatcacttattccccaccagcaaggac
gtccccaccctcgagtttcgctacaagagccgagtgtaccagcatgccaacgtgaatgaa
aagcagattgaaaagcttcatacgcaggccaacctgaagaagtttctagaatacattcag
catcaccaggtggataaagtgacaaatctgcttgaacgaggtctcgaccccaactaccat
gactcagacaccggagagactcctttgacactggctgcccatctggacaacatggtggag
atgataacagtgctgaacagcggaggagctcatttagatttccgctctcgggacggcatg
actgcgctccataaagctgtccgagccaagaaccagatcactcttaaggccatgttggaa
ttgggagcgtctccggattataaggatggtcagggtctgactccgctctaccacaccgtg
actgtagggggcgacccaagctgctgtgagatgttactacgcgctcaagccactttgacc
tgccacgatgagaacggctggcatgaaatccaccaggcttgtcgatacggtcatgtccag
cacttggagcatctcctattttacggagctgacatgcgtgtccagaatgcctctgggaac
accgcactccatatctgtgccctctacaaacaggagaattgtgccagagttttgttgctt
cgcggagccagcaaggaggtgaagaactaccgtgggcaaactcctttccaggtggccatc
attgcagggaactttgagctggcagagtacataaagaaccacaaagacgatagcattgtg
cctttccgagaggctccggcagcggtcgtgagttcaggcaggagcaggcctcagcagggt
cagactggccggagcactctggccgcacctcgcgtgctcctgcgttccaacagtgacaac
aacctgaacgttaacaagctctcggcgccgcacacgccctcgcgctcgccctcgccctca
cgctcaccgtcgccttcgcccctgcgcagcctgtcaccccgcaggccccagcagatgcag
aacagctccaatggcacggtaaagagcatgggccggggggccaggcaccccccgcgcagc
cgctcgccctcgctgggccgcctgggggacggcgacgcccgcagacacccgccccagcgc
cacagcagtcctcgtcccggtcgtgatggtttctctggggcagagactccagggtccaag
cgccggatgtacagcgctgtgcctgggagacattacgtggtggtaaagtcttatcaaccc
caggctgagggagaaatcaccctgttcaagaacgacagagtcaaagttcttagtgttggt
gaagggggattctgggagggcagcgcacgaggtaatgtcggatggtttccctctgaatgt
gtggaggaaatccccaacaagcctaacgaggaccgaccctatgcccgagcagaccgatct
gagaggcggaagctctttcgacactacacagtgggatcatatgacagctttgatgcatca
agtgactgcgtcatcgacgagaagactgtggtcctgcagaagaaggataacgagggcttc
ggcttcgtgctgagaggggcaaaagctgacaccccaatcgaggagttcaccccgacccca
gccttccccgccctgcagtacctggagtctgtggatgagggcggggtagcatggcaggcc
ggattgcgcaccggagacttccttatcgaggttaacaaggacaatgtggtgaaggtgggc
cacaaacaggtggttaatatgatccgtcacgggggaaatcatctcatcatcaaagtcgtg
actgtcagcagaaatctcgaccctgatgatacggctcgaaaaaaagccccagcccctcca
aggagagctccatccactgcgctttccacacgctccaaatccatgacctcagaactggag
gatttggataaagtggaggaggttgtccctccccagaaacccgtgtgggacaacgcgaat
gtggacgtgagggtggcagctgtaaaaccgcgccccacaagcaggtgcttcgctgtggcc
ccggaaatgaattcactgtgcaacagccaggacatatcagtggattccccaccggtaaca
gtaactccgaaaggcccatacttgggtgtgccaaaaggaaccatccgccgacagacatcg
ataggggtaactgaagaagaaaagcagttcctcactcctcccatgttaaaatttacaaga
agcctgtcaatgcctgacacatcggaggacattcccccaccaccggctatttcccctcca
tctcctccccacaacaatgctcccacatctgctggacatggttatggcacaatccgacca
ggcttcacctctcaaaatcctactgtgaacagcgctccttcagacagaggagactcaagc
cttggttcaggttggagagagcaaggcatgcattatagagaaaactctgaacagtacaat
gtagaggcctacagcaacagtccaactgctcagcagagccttcataagcgccgagcccag
attccagagaacccatactcggatgttggcaaaatggctaatgctgcactgtttgtccca
aacaagcctgcacgtagaaagggcatgcttgtgaaacagtccaatgtagaggacagccca
gagaaaacctgctccatccccatacccacgatcatcatcaaagagccctccaccagcagc
agtggaaagagcagccagggcagcagtatggagattgagacgactacgcctgaccaccca
ggccaactccggccagaggatggcctcgatacaggaagcccttttgcaactgccatggct
cccagcacagccagggaaaaacggttggcagttcacagaaattccccgtctttcagatcc
acagatgctggtgatgaggatgtggctcccactcctacccctcgtctgcgacactcaaag
tccattgatgagggcatgtttagcagtgatgagcgtctgcgccggctcatggctccccct
tcatccctgctcagcatccctcgaggagggggcaatgtgacagacttcaacagcccagaa
cccaccatggtgcgggagttactcaacactagaacaggtcacagtcctatcagcctgcca
gctcacaagacctacagctcagggagcgggaattatgttcaccctgtcaccggaaaacca
ctagaccccaattctccattagccttagcattagctgccagagaccgggccatgagggag
cagtctcagcctttgccacttaagagtgacccatccaaactggacctcaacaagccactt
ttcatcgacacaaaacttcggtccaatgttgaagtgagtttctccagcactgccaccatg
ggcaggccacggggaggcctgcggagacagatgacggagtcaaagtatgagacagagtcc
aagttccaactggacctgggcaaggctgagaagagggcagaggagaagaagaacatgctg
attgacattgtagacacatcccaacagaaatcagcagggctactaatggttcacaccaca
gatggggccaaaactgaggagaacagcctgtcggaaggcgagagagatgaggatgtttgt
cctgacagcacacctggggagcttcgtgatcccaaccagccagctcctgcaaagcctgca
acaccaaagcctctctctttgccaccaaaaaccatgatctctgtcagctctgtagatgag
cctgtcaaactcccctttggtatccctccaccgcctctggcctctgttgacattgatgag
gagtttgtgtttgccgaacccctgcctccaccattagagtttgccaatagttttgacatc
ccggaagaccaatcaggggcactcagtgaactactgaaacagaaatccaatggaatgagt
ggaccaacactttctccctattactcccatttaaccacaagcaactcaagagatcaagaa
atcaagagaccaacagttcttactaactgcacacctcccagctttcctacaggacctctg
gaaccctatgagcccattattgactcaggcattgaagtggacagccggagcagtggagac
ccccaactggaaaccacgagtacggtctccactgtatccagcatctccactttatcctca
gaaggaggagagaccctggacacttgcatggtctatgcagacggtcaggcctttctggtg
gacagggcgcaggtcctgcccaagcccaaagccaagtacgccgtcaacaagagcaacgca
ctttacaaggacgccttaaatgaggagaccataagctctttcagggtgccctcctcgatc
cccccaccacccctgggaactgccccaccagagcctctaaaaaccccaacacaaagaacc
tcaaagctttggggggaacctctggatctgaaaaacccccatggaccagagacaaaaccc
caaggcttgactgaaataaactctgttctgcaacatgtcagcaaagacaaaccaccaaag
ccaggggaagcactagactctcccccaggatgtagaactcactttggattgagaaatcag
gacggtgtgtccctcatctcaggaacccagccgaaccccagcatgtccttcaccaatcag
cccggcccgaacgtgcctgcgccgtcgccatgccgacaggctgagagcttgcatcaccat
cgtcatccctcgagcccaggcatcacatctcctcctccaattctgagctgctcctcatca
tcctcctctctacccgcggtgagcaccacgtcctctgtacagggccgaagtcgctcacct
tcaccactctcgttcctccaggccgcctctggcaaaccattcgcctccaaggcggttctt
tcgtggaccaaacaggacgtggctgactggctggaaagcctcaacctggcagagcacaga
gacgccttcctggagaacgacatagagggcacacacctgcccagcctgcagaaacaggac
ctaattgacctgggagtgacgcgcgtcggtcatcgcatgaacatcgagcgtgccctcaag
ctgctgcttgacagatga
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integrated database retrieval system
