Ictalurus punctatus (channel catfish): 108269016
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Entry
108269016 CDS
T04658
Symbol
ppp2r2cb
Name
(RefSeq) serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B beta isoform
KO
K04354
serine/threonine-protein phosphatase 2A regulatory subunit B
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu03015
mRNA surveillance pathway
ipu04261
Adrenergic signaling in cardiomyocytes
ipu04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
108269016 (ppp2r2cb)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
108269016 (ppp2r2cb)
09150 Organismal Systems
09153 Circulatory system
04261 Adrenergic signaling in cardiomyocytes
108269016 (ppp2r2cb)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ipu01009
]
108269016 (ppp2r2cb)
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ipu03019
]
108269016 (ppp2r2cb)
03036 Chromosome and associated proteins [BR:
ipu03036
]
108269016 (ppp2r2cb)
Protein phosphatases and associated proteins [BR:
ipu01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
108269016 (ppp2r2cb)
Messenger RNA biogenesis [BR:
ipu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
108269016 (ppp2r2cb)
Chromosome and associated proteins [BR:
ipu03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
108269016 (ppp2r2cb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_RIG_2nd
Beta-prop_IFT140_1st
Beta-prop_EML_2
Beta-prop_EML
WD40_MABP1-WDR62_2nd
Beta-prop_CAF1B_HIR1
Motif
Other DBs
NCBI-GeneID:
108269016
NCBI-ProteinID:
XP_017329978
Ensembl:
ENSIPUG00000015109
UniProt:
A0A2D0RHH1
LinkDB
All DBs
Position
8:complement(24725470..24739017)
Genome browser
AA seq
454 aa
AA seq
DB search
MLSPVLRSELSALEPEYTDADVISTVEFSQSGEFLATGDKGGRVVIFQREPQGEYNVYST
FQSHEPEFDCLKSLEIEEKINKIRWLPQINSTHFLLTTNDKTIKLWKVSERDKRPEGYNL
KDEEGRMKDISRITSLQVPVLRPMDLLVEASPRRVFSNAHAYHINSISINSDCETYLSAD
DLRINLWNLNITDRSFNIVDLKPENMEDLSEVITVAEFHPHHCHLLAFSSSAGATRLCDM
RSRALCDRPAKLFEESVDPAHRSFFSEITSSVSDVKFSHSGRYLLTRDYLTAKVWDINME
NKPVEIYQVQDYLRSKLCALYESDCIFDKFECAWNGTDSVIMTGAYNNFFRMFDRASRRD
VTLEASREVCKRRAVLRPRRVCVGKKRRENDISVDSLDFRKKILHTAWHPTDNIIAIAAS
NNLYIFQDRHGPGHHGGHQLEQDKPLQLQDTTRQ
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
atgctgagccccgttctccgatctgagctctcggccttggagccggagtacacagatgct
gatgtcatctctacggtggagttcagccaatcaggagagttcctggccacaggggacaag
ggtgggagagtggtcatctttcaaagagaacctcagggggaatataatgtgtacagcaca
tttcagagccacgagccggagttcgactgcctgaagagcttagagatagaggagaaaatc
aataagatccgctggttacctcagatcaattccacccacttcctcctgaccaccaacgat
aagaccattaagctgtggaaggtaagcgagagagacaagaggcctgaaggttacaacctg
aaagacgaggagggccggatgaaggacatttccagaatcacatctcttcaggtccctgtg
ttgcggccgatggatttgctggtggaagcgtctccgcggcgtgtgttttctaatgctcat
gcctatcacatcaactctatcagcattaacagtgactgtgagacttacctgtcagctgat
gacctgaggatcaacctgtggaatctcaatatcacagatcgcagcttcaatattgttgac
ctgaagccagaaaacatggaggacctgagtgaggtgatcacagtggctgagtttcaccct
catcactgccacttactggccttcagtagcagtgcaggtgctacacgcctttgtgatatg
agatctcgcgcattgtgtgaccgacccgctaaactatttgaggagtcagtggacccagcc
catcgatccttcttctctgagatcacttcctctgtgtcggatgtaaagttcagtcacagc
ggacgctacctgctcacccgagactacctcactgctaaagtctgggacatcaacatggag
aacaaaccagtggagatatatcaggtccaggattatttgcgctcgaagctatgcgcgctt
tacgagagcgactgcatctttgataagtttgaatgtgcctggaacggaactgacagtgtc
atcatgacgggggcgtacaataatttctttcggatgtttgaccgtgcgagtcggcgtgat
gtgactttggaggcgagccgggaggtgtgtaagcggcgcgctgtgctccggcctcgccgc
gtgtgtgtggggaagaagaggagggagaatgatatcagtgtggacagcctggacttcagg
aagaagatcctgcacacggcgtggcatcccacggacaacatcatcgccatcgctgccagc
aacaacctgtacatctttcaggatagacacggccccggacatcacgggggccatcaatta
gaacaagacaaacctctgcagttacaggatacaactcgtcagtga
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