KEGG   Ictalurus punctatus (channel catfish): 108269022
Entry
108269022         CDS       T04658                                 
Name
(RefSeq) integrator complex subunit 6
  KO
K13143  integrator complex subunit 6
Organism
ipu  Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:ipu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:ipu03041]
    108269022
Spliceosome [BR:ipu03041]
 Other splicing related proteins
  Proteins involved in snRNP biogenesis
   Integrator complex
    108269022
SSDB
Motif
Pfam: INT_SG_DDX_CT_C VWA_2 VWA_4 VWA
Other DBs
NCBI-GeneID: 108269022
NCBI-ProteinID: XP_017329986
Ensembl: ENSIPUG00000021945
UniProt: A0A2D0RIK9
LinkDB
Position
8:11628601..11657588
AA seq 899 aa
MPILLFLIDTSASMNQRTYLGTTYLDIAKGAVEIFMKLRARDPASRGDRYMLVTFDDPPY
GVKAGWKENHATFMSELKNLQACGLTTLGNALRTAFDLLNLNRLVSGIDNYGQGRNPFFL
EPSVIITITDGNKLTHSSGVPDELHLPLNSPLPGSELTKEPFRWDQRLFALVLRMPGAAV
PDTEQLGSVPSDESAITQMCEVTGGRSYCVRTQRMLNQCLESLVQKVLSGVVINFEKTGP
DPPPVGEDGLVDPVRPLSSFSSQPWHSCHKLIYVRPNPKTGVPVGHWPIPESFWPDQNSP
TLPPRSSHPVVRFSCVDCEPMVIDKLPFDKYELEPSPLTQYILERKSPHMCWQVFVSCSG
KHSDVVQPFGYLKASTTLTCVNLFVMPYNYPVLLPLLDDLFKVHKLKPNLKWRQAFEVYL
KSMPPYFLLPLKKALRMMGAPNLISDNMDCGLSYSVISYLKKLSQQAKMESDRMIVSVGK
KPPQETGIKVKNHSSTLSLAHRRDFKQLLQGITGEVPLRLNDINLKEFAGFQIAHLNKEV
KPQAYRNAYDIPRRNLLDQVTRMRSNLLRTTQKLIRSQDEDYLHSIPVGQMGNYQEYLKM
MPSPLREIDPDQPKRLHTFGNPFKQDKKGMMIDEADEFVTGTQNKKRGNSTEPNSGAAPK
RRRSMSPLLRRSQTPPIISNHVLGKGTTVAPGQPGLIKPIPLHKGVEGNSTVGAESNGER
VMSGESGDSWSGGVEGVGGETVVLSLEEKGGMKVTDGGEEEALLENRLGEECLEERLSER
PQNCENPSPPDQDRDMEGTGGDTSSRPTIVMVPLEGSNAELRTRVIKEVRKPGRNYEAIF
RLLEEVKGPVSVQRYFIHHAIKEAARFKKRVLIQQLESALEEIEERQMLTAQVNNVHGR
NT seq 2700 nt   +upstreamnt  +downstreamnt
atgcctattttacttttcctgatagacacgtccgcttctatgaatcagcgcacatatttg
ggtacgacgtatctggacattgctaaaggcgcggttgagatctttatgaagctgcgtgcc
cgagacccggctagtagaggcgacaggtacatgctagttacatttgacgatccgccatac
ggagtaaaggcaggctggaaagagaaccacgccacctttatgagtgaactaaagaatctg
caggcatgtggactgaccactcttggtaatgctctccgaactgccttcgacctgctcaat
ctcaacagactggtgtctggcatcgacaactatggccagggccggaatccctttttcctg
gagccgtcagtcatcattaccataacggacgggaacaagctaacacacagctctggagtg
ccagatgagcttcacctgcctctgaactccccgctacctgggagtgagctaaccaaggag
ccgttccgctgggaccagcgtctctttgccctggtgctgcgcatgcctggtgcagccgtc
cccgacaccgagcagcttggcagtgtgcccagtgatgaatcagccatcacccagatgtgc
gaggttaccggaggtcggtcatattgtgttaggacacagaggatgttgaaccagtgcctg
gagtctctggtgcagaaggttctgagtggagttgttattaattttgagaagacgggccca
gatccacctcctgtaggtgaagatggcctggtggatccagtacgacctctgtcatccttc
agttctcaaccttggcacagctgccacaagctcatatacgttcggccgaaccccaaaacc
ggtgtcccagtgggacactggccgattccagagtccttctggcctgatcagaactctccg
actctgcctcctcgatcttcccatccagttgtgcgtttctcttgcgttgactgtgagcct
atggtgattgacaagctgccctttgataagtacgagctggagccttcacctctcacccag
tacattttggagaggaagtcccctcacatgtgctggcaggtgtttgtgagctgcagtggt
aagcacagtgacgtagtgcagcccttcggctacctgaaagccagcaccactctcacctgc
gtgaatcttttcgtcatgccttacaactaccccgtactgttgcctctcctcgatgacttg
tttaaagtgcacaaactcaagccaaacctcaagtggagacaggcctttgaggtgtacttg
aaatctatgcctccttactttcttctgcccttaaagaaggcacttaggatgatgggagcg
ccaaatctcatctctgacaacatggactgtggcctcagctacagcgtcatttcctaccta
aaaaaactcagccagcaggcaaagatggagtcggaccggatgattgtgtcggtgggtaaa
aagccccctcaagagactggcatcaaggtgaagaatcactcgagtacactgtcccttgct
caccggcgtgacttcaaacagctactgcagggcatcacgggcgaggtgcccctccgcctt
aacgacatcaacctcaaagaattcgctggatttcaaattgctcacctcaacaaggaggta
aagccccaggcctatcgtaatgcctatgatattccacggcggaaccttctggatcaggtc
acacgaatgcgctccaaccttttaaggactactcagaagctaatcaggagccaagatgaa
gactatttgcatagtattcctgtgggtcagatgggaaactatcaggaatacctgaagatg
atgccatccccccttcgggagatcgaccctgatcagcccaaacgcctgcacacattcggc
aacccgtttaaacaagataagaagggaatgatgatagacgaagcagatgagtttgtcaca
ggcacccagaacaagaaaaggggaaactcaacagagcctaactcgggtgcagctccaaag
aggcggcgaagcatgtcccctctactacgccgatcccaaaccccacccatcatcagcaac
catgtgttgggaaaagggaccacggtggccccaggccaacctggtctcattaaacccatc
ccactgcacaaaggagtggaggggaacagcacggtgggtgcagagagcaatggtgagaga
gtgatgagtggagagtctggagacagctggtctggaggagtggaaggggtcgggggagaa
actgtagttctctctctggaggagaaaggaggaatgaaggtcactgatggaggagaagaa
gaggcactgctggagaacaggttaggagaagagtgtttggaggaaagactgtctgaaagg
ccacagaactgtgagaatccaagtcctccagaccaggacagagacatggagggcactgga
ggagacacttcttcacggcccaccattgttatggttcctctggagggaagcaacgccgaa
ttacgcactcgagtcattaaagaggtccgaaaacctggccgcaattatgaggcaatattc
aggctgctagaggaggttaaaggaccagtgtcagtgcagaggtactttatccatcacgcc
atcaaagaagcagccagatttaagaagcgtgtactgatccagcagctggaatctgctctc
gaggaaattgaagagaggcaaatgctgaccgcacaagttaacaacgtccacggcagatag

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