Ictalurus punctatus (channel catfish): 108269022
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Entry
108269022 CDS
T04658
Name
(RefSeq) integrator complex subunit 6
KO
K13143
integrator complex subunit 6
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ipu03041
]
108269022
Spliceosome [BR:
ipu03041
]
Other splicing related proteins
Proteins involved in snRNP biogenesis
Integrator complex
108269022
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Gene cluster
GFIT
Motif
Pfam:
INT_SG_DDX_CT_C
VWA_2
VWA_4
VWA
Motif
Other DBs
NCBI-GeneID:
108269022
NCBI-ProteinID:
XP_017329986
Ensembl:
ENSIPUG00000021945
UniProt:
A0A2D0RIK9
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Position
8:11628601..11657588
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AA seq
899 aa
AA seq
DB search
MPILLFLIDTSASMNQRTYLGTTYLDIAKGAVEIFMKLRARDPASRGDRYMLVTFDDPPY
GVKAGWKENHATFMSELKNLQACGLTTLGNALRTAFDLLNLNRLVSGIDNYGQGRNPFFL
EPSVIITITDGNKLTHSSGVPDELHLPLNSPLPGSELTKEPFRWDQRLFALVLRMPGAAV
PDTEQLGSVPSDESAITQMCEVTGGRSYCVRTQRMLNQCLESLVQKVLSGVVINFEKTGP
DPPPVGEDGLVDPVRPLSSFSSQPWHSCHKLIYVRPNPKTGVPVGHWPIPESFWPDQNSP
TLPPRSSHPVVRFSCVDCEPMVIDKLPFDKYELEPSPLTQYILERKSPHMCWQVFVSCSG
KHSDVVQPFGYLKASTTLTCVNLFVMPYNYPVLLPLLDDLFKVHKLKPNLKWRQAFEVYL
KSMPPYFLLPLKKALRMMGAPNLISDNMDCGLSYSVISYLKKLSQQAKMESDRMIVSVGK
KPPQETGIKVKNHSSTLSLAHRRDFKQLLQGITGEVPLRLNDINLKEFAGFQIAHLNKEV
KPQAYRNAYDIPRRNLLDQVTRMRSNLLRTTQKLIRSQDEDYLHSIPVGQMGNYQEYLKM
MPSPLREIDPDQPKRLHTFGNPFKQDKKGMMIDEADEFVTGTQNKKRGNSTEPNSGAAPK
RRRSMSPLLRRSQTPPIISNHVLGKGTTVAPGQPGLIKPIPLHKGVEGNSTVGAESNGER
VMSGESGDSWSGGVEGVGGETVVLSLEEKGGMKVTDGGEEEALLENRLGEECLEERLSER
PQNCENPSPPDQDRDMEGTGGDTSSRPTIVMVPLEGSNAELRTRVIKEVRKPGRNYEAIF
RLLEEVKGPVSVQRYFIHHAIKEAARFKKRVLIQQLESALEEIEERQMLTAQVNNVHGR
NT seq
2700 nt
NT seq
+upstream
nt +downstream
nt
atgcctattttacttttcctgatagacacgtccgcttctatgaatcagcgcacatatttg
ggtacgacgtatctggacattgctaaaggcgcggttgagatctttatgaagctgcgtgcc
cgagacccggctagtagaggcgacaggtacatgctagttacatttgacgatccgccatac
ggagtaaaggcaggctggaaagagaaccacgccacctttatgagtgaactaaagaatctg
caggcatgtggactgaccactcttggtaatgctctccgaactgccttcgacctgctcaat
ctcaacagactggtgtctggcatcgacaactatggccagggccggaatccctttttcctg
gagccgtcagtcatcattaccataacggacgggaacaagctaacacacagctctggagtg
ccagatgagcttcacctgcctctgaactccccgctacctgggagtgagctaaccaaggag
ccgttccgctgggaccagcgtctctttgccctggtgctgcgcatgcctggtgcagccgtc
cccgacaccgagcagcttggcagtgtgcccagtgatgaatcagccatcacccagatgtgc
gaggttaccggaggtcggtcatattgtgttaggacacagaggatgttgaaccagtgcctg
gagtctctggtgcagaaggttctgagtggagttgttattaattttgagaagacgggccca
gatccacctcctgtaggtgaagatggcctggtggatccagtacgacctctgtcatccttc
agttctcaaccttggcacagctgccacaagctcatatacgttcggccgaaccccaaaacc
ggtgtcccagtgggacactggccgattccagagtccttctggcctgatcagaactctccg
actctgcctcctcgatcttcccatccagttgtgcgtttctcttgcgttgactgtgagcct
atggtgattgacaagctgccctttgataagtacgagctggagccttcacctctcacccag
tacattttggagaggaagtcccctcacatgtgctggcaggtgtttgtgagctgcagtggt
aagcacagtgacgtagtgcagcccttcggctacctgaaagccagcaccactctcacctgc
gtgaatcttttcgtcatgccttacaactaccccgtactgttgcctctcctcgatgacttg
tttaaagtgcacaaactcaagccaaacctcaagtggagacaggcctttgaggtgtacttg
aaatctatgcctccttactttcttctgcccttaaagaaggcacttaggatgatgggagcg
ccaaatctcatctctgacaacatggactgtggcctcagctacagcgtcatttcctaccta
aaaaaactcagccagcaggcaaagatggagtcggaccggatgattgtgtcggtgggtaaa
aagccccctcaagagactggcatcaaggtgaagaatcactcgagtacactgtcccttgct
caccggcgtgacttcaaacagctactgcagggcatcacgggcgaggtgcccctccgcctt
aacgacatcaacctcaaagaattcgctggatttcaaattgctcacctcaacaaggaggta
aagccccaggcctatcgtaatgcctatgatattccacggcggaaccttctggatcaggtc
acacgaatgcgctccaaccttttaaggactactcagaagctaatcaggagccaagatgaa
gactatttgcatagtattcctgtgggtcagatgggaaactatcaggaatacctgaagatg
atgccatccccccttcgggagatcgaccctgatcagcccaaacgcctgcacacattcggc
aacccgtttaaacaagataagaagggaatgatgatagacgaagcagatgagtttgtcaca
ggcacccagaacaagaaaaggggaaactcaacagagcctaactcgggtgcagctccaaag
aggcggcgaagcatgtcccctctactacgccgatcccaaaccccacccatcatcagcaac
catgtgttgggaaaagggaccacggtggccccaggccaacctggtctcattaaacccatc
ccactgcacaaaggagtggaggggaacagcacggtgggtgcagagagcaatggtgagaga
gtgatgagtggagagtctggagacagctggtctggaggagtggaaggggtcgggggagaa
actgtagttctctctctggaggagaaaggaggaatgaaggtcactgatggaggagaagaa
gaggcactgctggagaacaggttaggagaagagtgtttggaggaaagactgtctgaaagg
ccacagaactgtgagaatccaagtcctccagaccaggacagagacatggagggcactgga
ggagacacttcttcacggcccaccattgttatggttcctctggagggaagcaacgccgaa
ttacgcactcgagtcattaaagaggtccgaaaacctggccgcaattatgaggcaatattc
aggctgctagaggaggttaaaggaccagtgtcagtgcagaggtactttatccatcacgcc
atcaaagaagcagccagatttaagaagcgtgtactgatccagcagctggaatctgctctc
gaggaaattgaagagaggcaaatgctgaccgcacaagttaacaacgtccacggcagatag
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