Ictalurus punctatus (channel catfish): 108269079
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Entry
108269079 CDS
T04658
Name
(RefSeq) ras GTPase-activating protein-binding protein 1 isoform X1
KO
K17265
Ras GTPase-activating protein-binding protein 1 [EC:
5.6.2.5
5.6.2.3
]
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu04623
Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09150 Organismal Systems
09151 Immune system
04623 Cytosolic DNA-sensing pathway
108269079
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ipu03019
]
108269079
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ipu04147
]
108269079
Enzymes [BR:
ipu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
108269079
5.6.2.5 RNA 5'-3' helicase
108269079
Messenger RNA biogenesis [BR:
ipu03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
108269079
Exosome [BR:
ipu04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
108269079
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NTF2
RRM_1
RRM_7
NXF_NTF2
Motif
Other DBs
NCBI-GeneID:
108269079
NCBI-ProteinID:
XP_017330118
Ensembl:
ENSIPUG00000001190
UniProt:
A0A2D0RHW7
LinkDB
All DBs
Position
8:14543289..14551142
Genome browser
AA seq
476 aa
AA seq
DB search
MVMEKPSAQLVGREFVRQYYTLLNQAPDYLHRFYGKNSSYVHGGLDNGKPAEAVYGQSEI
HKKVMALCFRDCHTKIRHVDAHATLNEGVVVQVMGELSNNMQPMRKFMQTFVLAPEGTVA
NKFYVHNDIFRYQDEVFGDSDSEPPEESEEEVEELEERVNSPEVQQEEAAAFYEQSPCVE
PEVPQEELSVTPEPQPEPEPEMEPEAAAVELKEDSPSQVEPLSVEKSLRAPPSPTPAESA
ATIPDENRPFSWALVTSKNLPQGGVVPASGIPPHVVKAPANQQPRVEVKPEPQTTVQRPQ
RDQRPREQRPGPLPAQRAPRPGVREGESGEPEVRRVVRYPDSQQLFVGNVPHDVDRAELK
EFFEQYGTVLELRINSGGKLPNFGFVVFDDSEPVQKILSNRPIKLRGDVRLNVEEKKTRS
AREGERHIRPRGPGGPRDRIGGPRGPPPRGGMAQKPSFGAGRGAGTSEGRYSGPRQ
NT seq
1431 nt
NT seq
+upstream
nt +downstream
nt
atggtgatggagaagccaagtgcccagcttgtcgggcgagagtttgtccgacagtattac
acccttctgaaccaggctcctgactacctgcacaggttttatggcaagaattcttcctat
gtgcatggtggtttggacaacggcaaacctgcagaggcagtctatggccagtcggaaatt
cataaaaaggtgatggctctgtgcttccgtgactgccacactaaaatcaggcatgtggat
gctcatgccactctgaatgagggggttgtggtgcaggtgatgggagagctgtccaacaac
atgcagcccatgaggaagttcatgcagacctttgtgttggcgccagagggcactgttgca
aacaagttctacgtacacaatgacatcttccgctatcaggatgaggtctttggggactca
gactctgaacctcctgaggagtccgaggaggaagttgaggagctggaggagagggtgaac
tcgcctgaggtgcagcaggaagaggcggctgcattctatgaacagagtccttgtgtggag
ccagaggttcctcaggaggagctgtctgtaacccctgagccccagcctgaacccgagcca
gagatggaacctgaggcagctgctgtggagctgaaagaggattcaccaagccaggttgag
ccccttagtgtggagaaaagcctaagagctcctccttcacctactcctgctgagtctgca
gccaccataccagatgaaaaccggcctttttcatgggctttagtcaccagtaagaatctc
ccccagggaggagtggtgccagcttcaggaatcccccctcacgtagtcaaagctccagca
aatcagcagcccagagttgaagttaaaccggaaccccagaccacagtacagagacctcag
agagaccagagaccacgtgaacaaagaccagggccccttccagcacagagagctccgaga
ccaggagtacgggaaggagagagtggagagcctgaggtaaggcgggtcgttcggtatcct
gacagccagcagctcttcgtaggaaacgtgccacatgatgttgacagggctgagctgaaa
gaattctttgaacagtatggaacagtactggagttgaggatcaacagtggtggtaagctg
cccaactttggatttgtggtttttgatgattctgagcccgtacagaagatcctgagcaac
cggcccattaagctgcggggagatgttcgtctgaatgtggaggaaaagaaaactcgttca
gcgcgtgaaggagaaaggcacatccgtcccaggggccctggaggaccacgggacaggata
ggagggccgaggggcccacctccccgagggggcatggctcagaagccaagttttggtgcc
gggcgtggtgcaggcaccagtgaggggcgttattccggaccacgccagtga
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