Ictalurus punctatus (channel catfish): 108269080
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Entry
108269080 CDS
T04658
Name
(RefSeq) glycine receptor subunit alphaZ1 isoform X1
KO
K05193
glycine receptor alpha-1
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu04080
Neuroactive ligand-receptor interaction
ipu04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
108269080
04082 Neuroactive ligand signaling
108269080
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ipu04131
]
108269080
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ipu04040
]
108269080
Membrane trafficking [BR:
ipu04131
]
Exocytosis
Calcium ion-dependent exocytosis
Acrosomal exocytosis proteins
108269080
Ion channels [BR:
ipu04040
]
Ligand-gated channels
Glycine
108269080
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
Motif
Other DBs
NCBI-GeneID:
108269080
NCBI-ProteinID:
XP_017330123
Ensembl:
ENSIPUG00000001240
UniProt:
A0A2D0RHW6
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Position
8:complement(14558982..14616871)
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AA seq
459 aa
AA seq
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MCRLSALGIYLWETVVFFSLAASQQAAARKAASPMPPSEFLDKLVGKVSGYDARIRPNFK
DPHGPKSDGTHKKGPPVNVTCNIFINSFGSIAETTMDYRVNIFLRQQWNDPRLAYSEYPD
DSLDLDPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRISKNGNVLYSIRITLILACPM
DLKNFPMDVQTCIMQLESFGYTMNDLIFEWDEKGAVQVADGLTLPQFILKEEKDLRYCTK
HYNTGKFTCIEARFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVGLGITTV
LTMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALLEYAAVNFIARQHKELLRFHRR
RRHLKEEDAGEGRFSFAAYGMGPACLQAKDGMAIKGNNNAPASSMPPEKSVEEMRKLFIS
RAKRIDTVSRVAFPLVFLIFNIFYWIIYKIIRSEDIHKQ
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atgtgtagattaagcgcactcggaatttatttgtgggaaaccgtagtgtttttcagcttg
gcagcatcccagcaagctgcagcacggaaagctgcctcccctatgcccccttcagaattc
ttggacaaacttgtggggaaagtatctgggtacgacgcaagaatcagacctaattttaaa
gacccacatggccccaaatcggatggtactcacaagaaaggtccacctgtgaatgtaaca
tgcaacatttttattaacagttttggatccattgctgaaacaacaatggattacagggtg
aatattttcctgagacagcagtggaatgacccccgactggcttacagtgaataccctgat
gactccctcgacctcgacccctccatgttagactcaatttggaagccagatttgttcttt
gccaatgaaaagggtgccaatttccacgaggttaccactgacaacaagctgctgaggatc
tctaaaaatgggaacgtgttgtatagcataaggataacactaattctggcctgtcccatg
gacctgaagaatttcccgatggacgtgcagacttgtataatgcagttggagagctttggc
tacactatgaatgatctgatatttgagtgggacgaaaaaggtgctgtgcaagtggctgat
ggactgacgttaccccagtttatcctgaaggaggagaaagatttacgctactgcaccaaa
cactacaacacagggaagttcacatgcatcgaggcccgcttccatctggagaggcagatg
ggttactacctgattcagatgtacatccccagtctgctaatcgtcatcctgtcctgggtg
tccttctggatcaacatggatgctgctcctgctcgtgtgggcctgggcattaccactgtg
ctcaccatgacaacacagagctcgggctccagagcctctctgccaaaggtctcctatgtg
aaggccattgacatctggatggctgtgtgcctgctgtttgtcttctcagctctgctggag
tatgctgctgtcaacttcatcgctcgccagcacaaagagctgctgcgcttccacaggagg
agacgacacctaaaggaggaggatgcaggtgaagggcgcttcagctttgccgcctatggc
atgggccctgcgtgtctgcaggccaaagacggcatggccatcaagggcaacaacaatgcg
cctgcctccagcatgccacctgagaagagtgtagaggagatgcgcaagctcttcatcagc
cgcgccaagcgcattgacacggtgtcacgggtcgccttcccactcgtcttcctcattttt
aacattttctactggatcatttacaagatcatccgcagcgaggatattcacaagcagtaa
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