Ictalurus punctatus (channel catfish): 108269122
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Entry
108269122 CDS
T04658
Name
(RefSeq) F-box only protein 38
KO
K10313
F-box protein 38
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ipu04121
]
108269122
Ubiquitin system [BR:
ipu04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
108269122
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Gene cluster
GFIT
Motif
Pfam:
F-box
F-box-like
Motif
Other DBs
NCBI-GeneID:
108269122
NCBI-ProteinID:
XP_017330192
Ensembl:
ENSIPUG00000017238
UniProt:
A0A2D0RI34
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Position
8:complement(4837112..4912388)
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AA seq
1095 aa
AA seq
DB search
MMGPRRKSTKTSVVGGTNCTSLQKVESKDYINELSHEVLCHIFRYLPMPDIMCMECLSRK
LQEAVSLYLRVVKMVDLCASRWWEYMPSGFTDTNFLTLLKKMPDLEQLYGLHPRYLERRR
VRGYEAFSIPGVLEALQACPSLLGVETSHLELVEAIWNYMPQVHILGKFRNRNGAFPIPP
ENKLTIPAAAKIQTLHLVGVNVPEIPCVSMLRHLYLKWVRLTKPQPFKDFLCVNLRTFVM
RNCAGPTNSLKYVPLVTGLASARNLEQLELVRVPFLGGLIQHVVEDSWRSGGFRNLHTIV
FGACKNALEVDLGYLIITAAHGLHEVRIQPSLTKDGVFSALKMAELEFPQFETLHLGYVD
EFLLQCKLSHTELVKYGLADVIENPGIITDVGMKAVNEVFPSIKYLVIYNCPHLHNPHSW
ITDHSRWSRLLDLTLVRCHAIKLESFSQCIEMLPNLEFISLDQMFREPPKGCARVGLSAG
TGIGVSSALVSNQNPNQNNNNNHQNNNNANIQPHNRDNAVDMAPHRVEEIHDVEGLMVEN
IEVEPQVTDASPEKESKGSCQAPDQDEEQAGPSGVQPASKKIPVVVSDSDSDDDEASDKS
QGAFCSSQHYPKADMQEKRDDAKELATRDKGKTPLRRWGAQYTSYEKGCQVTSEQIKADI
KAANETAVDGSQDRNNGACVCSVDWSVESDNLRRPRDAGGRDDDSRLRAHCNCSRTHLGS
ERSSHATFNQPGGEESRSSHHVPKQRAKAEPSTIGHQGGVVSHTTSRGMFSSRPMTRACS
RLCSVPLAPDSGLSKAMPRIAVQRKHTADKSTSTSDPVTEDDHVQVLTLKSRNLVGITLS
NCGITDLVVKDCPKMMFVHATRCRVLKYLKVQNTPIVNRFDYAQCKKLDIEQILDQVLRI
PAERNRIVYLRPMKKIDSLALERKLFSGPYPYHIAIIHEFSNPPNVRNKVRVRSWMDTVS
NISQELIKNEFFPEAKRTEADIKKYPNYPWGRDIYTLDGVVDGAPYSMISDFPWLRSLRV
AVPNGYARCDFDDDESTTIYAPRRKGQLSADICMETIGEEISERRQMQLGVFQRVVVIFI
HYCDMHGEPVDDDYI
NT seq
3288 nt
NT seq
+upstream
nt +downstream
nt
atgatgggccctaggcgaaaatccactaagacaagtgtggttggaggaacaaattgtact
tctttgcaaaaagtggaatcaaaagattacataaatgagctttcacatgaggtgctctgc
catatattccgctatctgcctatgccagacattatgtgcatggaatgtctatcacgaaag
ctacaagaggcagtaagtctgtatttgcgggtggtgaaaatggtggacctgtgtgccagc
cggtggtgggagtacatgccttcaggatttacagacacaaatttcctcacactgctgaag
aagatgcctgatttggagcagttgtatggtttgcacccacgttatttagagcgtaggagg
gtcaggggatatgaagctttcagtattcctggtgttttggaggctctccaggcatgtccc
agtcttttgggcgtggagacatctcatttggagctggtggaagcaatatggaactacatg
cctcaggttcacatccttggaaagttcaggaaccgcaatggagcatttcctattccccca
gaaaacaaacttacaattccagctgcagctaaaattcagacccttcatcttgttggtgtc
aatgtcccagaaattccttgtgtgtccatgctcagacacttgtatctgaagtgggttcgt
cttacaaaacctcagccattcaaggattttttgtgtgtgaatctgcgtacatttgtcatg
aggaactgtgctggtcccaccaactccttgaagtatgtcccactggtgacagggttggcc
tctgcacgcaacttggagcagctagaacttgtaagggttcctttcttaggaggactaata
caacatgtggtggaggacagctggaggtcaggaggatttcgcaatttgcacactattgtc
tttggagcctgtaagaatgctcttgaagtggatttaggctacctcatcattactgctgca
catggattgcacgaagttcgaatccagccttccttaaccaaagatggggtcttctcagcg
ctaaaaatggcagaacttgagtttccacaatttgaaactttgcatcttggatatgttgat
gagttcctattacagtgtaaattgagtcatactgagttggtcaaatatggccttgctgat
gtaatagaaaacccaggaatcatcactgatgttggaatgaaggctgttaatgaagtgttt
ccctccatcaagtatcttgtcatttacaactgcccacatcttcataacccacacagctgg
atcacagatcattctcgctggagcagattgctggatcttacactagtgcgctgtcatgcc
attaagcttgagtcctttagccagtgtattgaaatgctgcccaatctggagttcatctcc
ttagaccagatgttccgtgagcccccaaagggttgtgcccgggttggtctgagtgcaggc
acaggtattggtgtatcctctgctctggtcagtaaccagaatcctaaccagaacaacaat
aacaatcaccagaacaataataatgccaatattcaaccacataatcgggacaatgctgtt
gacatggcaccacacagagttgaggagatccatgatgttgagggcttaatggtggagaat
attgaggttgagccacaggtaacagatgccagtccagagaaggagtctaaagggtcatgt
caggcaccagatcaagatgaagaacaagcagggcccagtggcgtgcaacctgccagtaag
aaaattccagtagttgtctctgactctgacagtgatgatgatgaagcttcagacaagtcc
caaggtgccttttgctcctctcaacattaccctaaggcagacatgcaggagaagagggat
gatgcaaaagagctagccacaagagacaaagggaaaactccattgcgccgatggggagcg
cagtataccagctatgagaaaggctgccaggtgaccagtgagcagatcaaagcagacata
aaagcagccaatgaaacagcagtggatggtagccaagacagaaataatggggcatgtgtc
tgctccgttgactggagtgtggaatcggataatctcagaaggccaagagatgcaggagga
agggatgatgacagtagactgagggcacattgcaattgtagcaggactcacttaggctca
gagagaagttctcatgccaccttcaatcagccaggaggagaggagagccgatcatctcac
catgttcccaagcagagagctaaagcagaacccagcacaatagggcaccaaggtggagtg
gtgtctcatacaacttccagaggcatgttttccagtcgaccaatgacccgtgcttgcagt
agactctgttctgtccccctagcgcctgactcggggctttccaaagctatgccacggatt
gcagtgcaaagaaaacacactgcagacaagtcaaccagcaccagtgacccagtcactgag
gatgaccatgtacaggtgctcacattgaaatccagaaatctagtgggaatcacactctca
aactgtggcatcacagacctggttgtgaaggactgcccgaaaatgatgtttgtccatgcc
actcgctgtagggtgctgaagtacctaaaggtgcagaatactcccatagtgaaccgcttt
gattatgcccagtgcaagaagctggatatagaacagatcttggatcaggtgttacgcata
cctgccgaaagaaatcgtatcgtctacttgcgtcctatgaaaaagattgactcattggcc
ctggaaagaaagttgttcagtggtccctacccataccacatcgcaattatccatgagttc
agtaacccccccaatgtaaggaacaaagtgagagttcggagctggatggacactgtctct
aacatcagtcaggaactaatcaagaatgaattcttcccagaggcaaaaagaacagaagca
gacataaaaaaatatcctaactacccgtggggccgagacatctataccttagatggtgta
gtagatggagcaccctactcaatgatctctgatttcccatggcttcgttctctgcgtgta
gcagtacccaacggttatgctcgttgtgactttgatgatgatgaaagcactactatctat
gctccacggcgcaaaggacagctttcagccgatatctgcatggagaccattggtgaggag
atctcagagcgtcgtcagatgcagctaggtgtattccagcgggtggttgttattttcatc
cattactgtgacatgcatggagaacctgtggatgatgactatatttaa
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