Ictalurus punctatus (channel catfish): 108269161
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Entry
108269161 CDS
T04658
Symbol
erc1a
Name
(RefSeq) ELKS/Rab6-interacting/CAST family member 1a isoform X3
KO
K16072
ELKS/RAB6-interacting/CAST family member 1
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
108269161 (erc1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ipu04131
]
108269161 (erc1a)
Membrane trafficking [BR:
ipu04131
]
Exocytosis
Others
Others
108269161 (erc1a)
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
108269161 (erc1a)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cast
CCDC39
Rod_CreS
CCDC18_1st
CEP135_N
CCDC192
HisZ_C
Motif
Other DBs
NCBI-GeneID:
108269161
NCBI-ProteinID:
XP_017330266
Ensembl:
ENSIPUG00000004073
UniProt:
A0A2D0RJE6
LinkDB
All DBs
Position
8:complement(16797129..16827304)
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AA seq
967 aa
AA seq
DB search
MYGSSRSVSKMDGNHSGSRNSQGNSGRSPRLPRSPRMGHRRTNSMGGSGGGPGGPGGKTL
SMENIQSLNAAYATSGPMYMSDNEVALVTSSDIPKSGMATGRFGGSIPYGVRGTVTGSTP
DMAMVPTVSTDSMSFGGELHTASTVPHSLRQARDNTIIELQAQLKEVLRENELLRKEVEV
KESKLSSSMSSIKTFWSPELKKERALRKDEASKIAVWKEQYRAIQDETQHLQTTVQALQA
ELRIQRDLNQLLQPPGEPLALEPGEEQERQARELVLLRRTIQEMELRLETQRQTLVARDD
SVKKLLEMLHNKGPSSKSSEEDHELTCRLADAEMHAHHLENLLEQRDKEMVAMREELHRR
LEGTPESTKTKALQTVIEMKDSQISSLERGLRELEDQVMMLRSSNMLTCEERQEEVKQME
VYRNHTKFMKNKMDQVKQDLSRKDTQLLGLQTKLETLTNQFSDSKQHIEVLKESLTAKEQ
RAAILQTEVDALRLRLEEKETLLNKKSKQIQDMSEEKSTLNGEIHDLKDMLEVKERKINV
LQKKIEILQEQLRDKEKQMSSLRERVKSLQTDTSNTDTVLSTLEDSLAEKERIIERLKEQ
RDREEREKAEELDSSKRELKELKEKVSLLQGDLSDRENSLLDLKEHASSLASSGLKKDSK
LKTLEIALEQRREECSKLENQLKRAQNAAVEAQANSELSKRIASLETDVARHREESGKAQ
AEVDRLLEILRQMENEKNDKDRKINELERQMKEQGKKPPGKHREPSGKGRSANDNPQQES
LRQKAERIEELEEALRESVQMTAEREMVLAQEEAARTHQEKQMEELLGAMEKVKQELESM
KAKMSSTQQSLAEKEAHLTTLRAERRRHLEEVLEMKQEALLAAISEKDANIALLELSSSK
KKKTHEEVAQLRREKDRLVQQLKQQTQNRMKLMADNYDDGHLKTPPDQTNHKTPKSPDQD
DEEGIWA
NT seq
2904 nt
NT seq
+upstream
nt +downstream
nt
atgtacggcagctctcgctctgtgagtaaaatggatggcaatcacagtgggagccggaac
agccagggcaactcaggccgatctccccggctgccacgctcaccccgaatgggacaccgc
cgcaccaacagcatggggggcagtggcggtgggcctggtggccctgggggcaaaactctt
tccatggagaacatccagtccctcaacgctgcgtatgccacgtctggtcccatgtacatg
agcgacaacgaggtcgcgcttgtcacctcctccgacatcccgaaaagtggtatggcaacc
ggacgctttggtggcagcatcccatatggcgtgcgtggaacagtcaccgggagcacgcct
gacatggccatggtgcctactgtgtccacagactccatgagctttggaggagagctccat
acagcatccacagtgccacattcattgcgccaggccagagacaacaccatcatagagctg
caggcgcagctaaaagaggtgctgagggagaatgagctcctgaggaaggaggtggaggtg
aaagagagcaaactcagctcatctatgagctccatcaagacattctggagccctgagctg
aagaaggagagggcgctgcgcaaggatgaggcttccaagatagcagtgtggaaggaacaa
tatcgtgccattcaggatgagactcagcacctgcagaccacagtgcaggcgctgcaggct
gagttgcgcatccagcgtgacctgaaccagctgctccagccaccaggggagccgctcgca
ctcgagccgggtgaagagcaagaaaggcaggctcgcgagcttgtcctgctccgccgcacc
attcaagagatggagctgcggctggagacgcagaggcagacgctggtcgcacgtgacgac
tctgtcaagaagctgctggagatgctgcacaacaaagggccatcaagcaagtccagcgag
gaggaccacgagcttacgtgccgtctggccgatgcagagatgcatgcacatcacctggag
aacctgctggagcagcgtgataaagagatggtggctatgcgggaagagctgcatcggcgc
cttgaagggacgccggagtctacaaaaaccaaagctctgcaaaccgtcattgagatgaag
gactcacagatcagctcgctggagcgagggctgagggagctggaggaccaggtcatgatg
ctgcgctccagtaacatgcttacttgcgaggagcgacaagaggaagtcaagcaaatggag
gtctaccgcaaccataccaagttcatgaagaacaagatggaccaggtgaagcaggacctc
tctaggaaggacacccagctccttggcctgcagaccaaacttgagacccttaccaatcag
ttctctgatagcaaacagcacattgaggtgctcaaagagtccctgactgccaaggagcag
cgagctgccatcttacaaacagaggtggatgcactgaggttgcgtcttgaagaaaaggaa
actctgctgaacaaaaagagcaagcagatccaagacatgtccgaggagaagagtacactc
aatggcgagatccatgaccttaaagacatgttagaagtcaaagagcgaaaaatcaatgtg
ctacagaaaaagattgagatcttgcaggagcagctgagggataaagagaagcagatgagc
agcttgagagaaagagtgaagtctctgcagactgatacatccaacacagatacagttctc
agcaccctggaggactcactggctgagaaggaaagaatcatcgagcggctaaaggagcag
cgtgaccgggaggagagggagaaggccgaggagctggacagcagtaagagagagctgaaa
gagcttaaggagaaagtgagcttgctgcagggggacctttctgacagagagaattctttg
ctggaccttaaagagcatgcatcatccttagcctcatctgggctaaaaaaagactccaaa
ctgaaaactctggagattgcccttgagcaaaggagggaagagtgctctaaactggagaac
cagctaaagagggcccagaacgcagctgttgaggcacaggccaactcagagctctccaag
agaattgcctcacttgaaactgatgtggccaggcacagagaggagtctgggaaggcccag
gctgaagttgaccgactgctggagatcctacgccagatggagaacgagaagaacgacaaa
gacaggaaaatcaatgagcttgagaggcagatgaaggaacagggcaaaaagccacctggg
aaacacagggagccgtctggcaaagggcgcagcgccaatgacaacccacagcaggaatct
ttgcggcagaaggcagagcgcattgaggagctggaggaggcactgagggagagcgtacag
atgactgcggagagagagatggtgttggcacaggaggaggcggcacgtactcaccaggag
aaacagatggaggagctgctcggggcaatggagaaggtgaaacaggagcttgagtccatg
aaagccaagatgtcatccacccagcagtctctggctgagaaggaggcccatctgaccaca
ctgagagctgagaggaggagacatctggaggaagttctggagatgaaacaggaggctttg
ttggctgctattagtgagaaggacgctaacattgccctgttggagctgtcctcgtccaaa
aagaaaaagacgcatgaggaagtggcgcagctacggagggagaaggaccgtctggtgcag
cagctcaaacagcagacacagaataggatgaagcttatggcggataactatgacgatggc
catctgaaaacgccccctgaccagactaaccacaaaactccgaaatcccctgatcaggat
gatgaggagggcatttgggcgtag
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