Ictalurus punctatus (channel catfish): 108269184
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Entry
108269184 CDS
T04658
Symbol
prom1a
Name
(RefSeq) prominin-1-A isoform X6
KO
K06532
prominin 1
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ipu04147
]
108269184 (prom1a)
04090 CD molecules [BR:
ipu04090
]
108269184 (prom1a)
Exosome [BR:
ipu04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
108269184 (prom1a)
CD molecules [BR:
ipu04090
]
Proteins
108269184 (prom1a)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Prominin
Tweety
Motif
Other DBs
NCBI-GeneID:
108269184
NCBI-ProteinID:
XP_017330315
Ensembl:
ENSIPUG00000016757
UniProt:
A0A2D0RK56
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Position
8:complement(25457662..25525617)
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AA seq
871 aa
AA seq
DB search
MMRTPAMALLLLLGCSCSCSCSGSTLGASPSAAAPLDFGSVPGGVYETVAYYEPGPIGLL
FNMMRAFLHVVQPNPFPQDLVIQVAKDKFGAIKSEYQKPENIVLTLQVIYYELGFVVCAV
LGILFIVLVPLVGLLFCMCRCCDNCGGEMHQRQRKNADCQRGLLTTLLLTTTFIITAGVL
CAYAANQNLSSQLKTMRKLVNSNLRDLYTVANNTPAQIDHLISQYGTAKNQVLCDLDNVG
QLLGGKIHEELGKVVLPALDEAQNMAGVMQDTKEALENVTVTLRVLQEGTAQLQSNLSKV
RVDITNTLDNQVCTQSFSPICSNILSSLSQLEISANYSALPGVSEQLDKVNDVLKTDLSQ
IVHKGFLAFNDTPTMVTNQTRNVAEGVRGLLDGIGNNITRFSKLFPVQTTLNNVTIFISH
THSQIEDLYPEIDKMDFYRWIGCITLCCMVALILAFNFLGLLCGILGFDKHASPTTRGWV
SNTGGNLLMAGVGFSFMFSWVLMGVVTVTFVVGGNVEKLVCEPFHSRELFKVLDTPNMVN
PSWKHFIPGYLYNDPEMDLTVEDIYSKCKENRGIYSAFHLDKVLNISALLNISLYTKDVS
KKFDGLKVDLKTIVLLDAEGKENLISFTETSIKDIDFAAYIEELNKGVTRVDLLLFASEL
DADADQLPKGSVQNSIKGHANTLRQIYAKQVIPLQQSMKYVSARSTMNHSIRFLERTASD
LSNKIPEILRAVEAAQNLISHNASFAVNQESEKYKQTIIGYFKQYIDWIKTSLTMEVATC
KPVSNIVDTAEILVCGFFFDSMNTFWFGLGCSALFLLPSVILSVRLAKFYRRMDTEDVYD
DIDTIPMKTLPAYDTMTRFPRASAPPRHGDW
NT seq
2616 nt
NT seq
+upstream
nt +downstream
nt
atgatgcgcacaccggccatggcgctgctgctgctcctcggctgctcgtgctcatgctcg
tgcagcggctcgactctcggagcttctccatccgccgcggcaccgttagatttcggctcg
gtacctggaggagtttatgaaaccgtcgcgtattacgagcccggcccgatcggcctgctg
ttcaacatgatgcgcgccttcctgcacgtggtccagccgaacccgttccctcaagatctc
gtcatccaagtggcaaaggacaagttcggagccatcaagtctgagtaccagaagccagag
aacattgttctgacactgcaggtgatttactatgagctgggctttgtggtgtgtgcggtc
ctggggattctcttcattgtgcttgtaccgctggtcggattgctcttctgcatgtgccgc
tgctgcgataactgcggtggagagatgcaccagagacaaaggaaaaacgcagactgtcag
agaggactgcttaccacgctcctgctcaccaccaccttcatcatcactgctggggtcttg
tgtgcatatgcagccaatcagaacctgagttctcagttgaagaccatgaggaagctcgtc
aacagtaacctgcgagatctgtacaccgttgccaataacacaccagcgcaaatcgatcac
ctgatatctcagtacggaaccgccaagaaccaggtgctctgtgatctggacaatgtaggt
cagttattgggtggaaagatacatgaagagctcggaaaagtggtgcttcctgccctggac
gaggcacagaacatggctggagtgatgcaggacactaaggaggctctggagaacgtgacc
gtgacgttgcgggttctacaggagggcacggcgcagctgcagtctaacctgagcaaggtg
cgagtggacatcacgaataccctcgacaaccaggtgtgcactcaatcattttcacccatc
tgcagcaacatcctcagctcgctcagccaactggagatcagcgctaactactcagcgctg
cctggtgtgagtgagcagttggacaaagtgaatgacgttttgaagaccgacctcagccag
atagttcacaaggggtttttagccttcaatgacaccccaaccatggtaacaaaccagacc
agaaatgtagctgaaggagtccgaggtttgttggatggcatcggcaacaacatcaccaga
ttctccaagctgtttccggtgcagactactctgaacaacgtcaccattttcatcagtcac
acacactcacaaatcgaggatctttatccagagatcgacaaaatggacttctataggtgg
attgggtgcatcacactgtgctgcatggtggcgcttatcttagccttcaacttcctcggt
cttctgtgtggaatcctgggatttgacaaacacgcctctcctactacccgcggctgggtg
tctaacaccggaggaaacctgctgatggctggtgtgggcttcagcttcatgttctcctgg
gtgctcatgggagtggtgacggtgacgtttgtggttgggggcaatgtcgagaaactggtg
tgtgagcctttccactccagagagcttttcaaggtgttggacactccaaatatggtgaac
ccttcatggaagcacttcatccctggctacctgtataatgatccagaaatggatctcact
gtggaagacatttacagtaagtgtaaggagaaccgtgggatttattccgccttccatctg
gataaagttctcaacatctcagccttgctcaacatcagcttgtacactaaggacgtgtct
aagaagttcgacggcctgaaggtggatctgaagacgatcgtcctgctggatgcagagggc
aaagagaacctcatcagcttcaccgagactagcattaaagacatcgactttgcagcgtat
atagaggagctcaataaaggagtgacccgagtcgacttgctgttgttcgccagtgagctg
gatgctgacgctgaccaactgcctaagggatctgtacagaattcaatcaagggccacgct
aacacactgcgacagatctacgccaagcaggtcatccctcttcagcagtccatgaaatat
gttagcgcaaggagcactatgaaccacagcatcaggtttctggagaggaccgcctcagat
ctatcaaacaaaataccagaaatacttcgcgccgttgaggcggcgcagaatctcatctcg
cacaacgcaagttttgctgtcaatcaggaaagtgagaaatacaagcagaccatcattggc
tacttcaaacagtatatagattggatcaagacatcactgacgatggaagtggccacatgc
aaacctgttagcaacatcgtagacactgcagagattctggtctgtggcttcttcttcgat
tcgatgaacacgttctggttcggtttgggctgctctgcgctcttcctactgcccagcgtc
atcctgtccgtaaggctggccaagttctaccgcagaatggacaccgaagacgtctatgac
gacattgacacaattcccatgaaaaccctccctgcctatgacactatgactcgattccca
cgagcctcagcgccccctcgccatggcgactggtga
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