Ictalurus punctatus (channel catfish): 108269227
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Entry
108269227 CDS
T04658
Name
(RefSeq) receptor-type tyrosine-protein phosphatase beta isoform X1
KO
K05694
receptor-type tyrosine-protein phosphatase beta [EC:
3.1.3.48
]
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
108269227
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ipu01009
]
108269227
Enzymes [BR:
ipu01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.48 protein-tyrosine-phosphatase
108269227
Protein phosphatases and associated proteins [BR:
ipu01009
]
Protein tyrosine phosphatases (PTPs)
Class I PTPs (Classical)
Receptor PTPs
108269227
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
fn3
Y_phosphatase
Fn3_Dep-1_4th
Ig_ILCR1
PTP_tm
Pur_ac_phosph_N
CysR_MRC2_N
Tc-R-P
Ricin_B_lectin
DSPc
Y_phosphatase3
Motif
Other DBs
NCBI-GeneID:
108269227
NCBI-ProteinID:
XP_053538069
Ensembl:
ENSIPUG00000006787
UniProt:
A0A9F7TM82
LinkDB
All DBs
Position
8:complement(71155..124376)
Genome browser
AA seq
3211 aa
AA seq
DB search
MDTHLHTLFLLMLLNFSTYSGFLIRHTSKGVCVTVQGGVVVVLRICDVKNPSQDWTWTAD
RKLKHTHSAVCLWVNLSVGTPSHARLVKTHPCNSAPAWKCYDEFGTFGLEMLPLYLQKQG
ERVVVRSEPKHSNWTRYTEHKVELTHICSHTGPSTVAKTTGVITTVRIPVTSYNTARTRT
KRTRTTGTFNKDKLTHTVGPELLNLEKQEAISVTQFPSEKRNVISNVTAVSDFLQDMRQR
TDMSSEFIPTERRNMVTSLPANTRFRSPTAGNFSNSSNSSNSSSTASVFSTSITEAAETQ
TDIKSVKHMTTWSHVTGSRHSVISRAVLNKTQTSRMKTATTTTAAPRVTTMETTIGPTVT
ETLSENTSTAAFTSATTKPRTADTQTTMTAPVPQTTTRFTSAPETRAAPTTNGLVPKSIR
ATNSKSVTTLRTVTTAIGANATSFITTAAPTTTAPGTASTPNTATPVTVLASSTPAPITT
ASTATRPITKAPRSTTITPINKVRRVTISTHAISIALTTTLATIGSTNTANEATTASSIT
TTTEASTTTPITTTTEATTTVPIPTTTGATTIAQIIITTEETTTAPITTTTGATTSAPII
TTPGATTTAPITTTTEATTTAPIITTTEATTTAPITTTTEATTTAPITTTTRETKSRMAP
TEAITTAESLTTEPPTTTTPTTTVTSTTFTTSTMPQRETTEKQVRCVVNQTEAIINSNSS
VIEFGSAGHFCVFTLINRETGSQITNCSQIQTHSNRFTCEVSGLKPGTVYHFGIISQTDG
EHFNISLQTDPAQPSGLEITPDVSLSPGLWIKWLRSPGHVEWYELVLLDLRMDFLKKKKI
SGNAVTRSNFTNLIPGTRYTLRLVAKSGNKTSVAATGNAVIAPSAVSSLNVSAVSTSIRV
SWQPGPGHTEEFWVMLSHEDALIQNQTFKNTVTSCTLDGLSPGALYTVTVVTEAFRKQQN
ATKDIRTVPAPVTELKLENGGSEDSLNTSWTPAEGEVDEYLISLTSSSSSTEQEAVLSPN
TSHWRFRRLTPGRVYQVSVRTKSGELSTEAKATGRTVPAPVTELKLENGGSEDSLNTSWT
PAEGEVDEYLISLTSSSSSTEQEAVLSPNTSHWLFRRLTPGRVYQVSVRTKSGELSTEAK
ATGRTVPAPVTELKLENGGSEDSLNTSWTPAEGEVDEYLISLTSSSSSTEQEAVLSPNTS
HWLFRRLTPGRVYQVSVRTKSGELSTEAKATGRTVPAPVTELKLENGGSEDSLNTSWTPA
EGEVDEYLISLTSSSTEQEAVLSPNTSHWRFRRLTPGRVYQVSVRTKSGELSTEAKATGR
TVPAPVTELKLENGGSEDSLNTSWTPAEGEVDEYLISLTSSSSSTEQEAVLSPNTSHWLF
RRLTPGRVYQVSVRTKSGELSTEAKATGRTVPAPVTELKLENGGSEDSLNTSWTPAEGEV
DEYLISLTSSSTEQEAVLSPNTSHWRFRRLTPGRVYQVSVRTKSGELSTEAKATGRTVPA
PVTELKLENGGSEDSLNTSWTPAEGEVDEYLISLTSSSSSTEQEAVLSPNTSHWLFRRLT
PGRVYQVSVRTKSGELSTEAKSTGRTVPARPMWCKLMPLGDPVSLRLSWSPTLGQWEYYK
VQLLNDSFVIMNQMVDREAKDFLFTSRTFLPGRLYSAKITVFSGSLTNTQSCQARLAPGR
VQKLLVHHNDESSVYVQWHPPLGEWEEYSVYLTDVGGEVKKRRTLSREINECSFHDLTPG
KEYNITVVTHSGDLNSSTTINTHTIPASVTQLNVNNEGTTDSLRVSWTKAEGDVDLYRML
LIQNIIVIRNESVTSQQSSYSFHMLKSGTPYRVVVISMKNGVSSKQRVSEGCTVPAAVGG
VSVSNNGRTDFLSVWWRPAQGQVDKYTVTLSHHGNIIHTHTVLKSTSECVFNSLVSGRLY
NISVNTHSGVYTNRTVVQERTQPSPVLTPCVTHMARDDSLRVYWRHPAGDFDFYQIVVQH
NSVIQHNTTVTQSQDECVFTNLVPGRLYIVIISTWSGKYEATVSTHGRTLPAGVRNLTLL
SQGTQELGVAWASAVGDVDHYEVQIVFNDMKVFHPVTLSSSTTQHVLSLLTPGRLYKIIV
STFSGPNLSTRFIEGRTVPSKVKNIHVSNVEETSSLRVSWTPAQGDVDSYCVFLIGPGGV
IETRPTPKHVNEITFSSLQPGEKYSIRVQTISGNLHNNNTVTARTVPSPGTSVHVDSSVS
LSSVRVRWSVGKGVCDGFSVLLQDERGSVLRNVTLPPVSLQHEFTQLTPGRKYCILIHTL
SGGIQSRAAITHTRTLPAPVTDLSVLSRSSSSLSLGWSRPVGDFDSFVVYLYRGDSSLQE
QCSGGANMMSCSFSHLIPGTEYRATVLTKSAELSSKNYIHARTVPEAVSSVCVESRNRTD
MLYVSWKPAAGEVSGYTVTLYDSTQSQHAMQHLSSDITQLEFHGLVPGHLYYANITTHSA
NLSNIATSIARTAPKPPSLFSYGDVTNTSVEVKWAGPNGSDYDDFDLQWSPGDALSVINP
YQSTTLHRRLLRGLYPGRLYTLRLCTVSRTGGHATYSQHVFIHIRTKPQRISSLHCRPLN
SSEVLCSWSPPQADFDWYRVECFRQDSGVLVISNRMPRNSTLYHITNLEPYKSYNISITV
ISNNMASEAAEQNTSTMIDRPPLPPLSIRVGKSIVHITKSSIFFRFDCSWFSDANGAVQY
FSIIVTESGESEDVQPEQRHPLPSYRDYINNTSVKVYQSGYFPSNCDYGLGSTHTFNITL
GSGMDILGGKCEHTPTHTLSTDTERGVYCDGPLKPNTAYRVSVRAFTRLASSPLFRDTFL
SPPLVTDTEPLVGVIEGVSAGLFLILSMVGIIIILICRHKTHKVVQEPMVRINVRRDRTT
SISRIRGFRNRRISSPINILNFEVHLTKLQADSNYLLSQEYEDLKEVGRNQPLDTALLPE
NRGKNRYNNILPYDSTRVKLSCVDDDPSSDYINASYIPGNNFRREYIATQGPLPGTKDDF
WKMVWEQNVHNIVMVTQCVEKGRVKCDHYWPFDQDPLYYGDLIVRMQSESVLPEWTIREF
KICSEDQLNYCRTVRQFHYTVWPDHGVPESTQSLVQFVRTVRDYINRTPGSGPSIIHCSA
GVGRTGTFIVLDRVLQQLNTKDTVDIYGAVFDLRLHRSHMVQTESQYTYLHQCVRDVLRA
RKLRSEQENPLYPVYENVPPENHWDRVHMRR
NT seq
9636 nt
NT seq
+upstream
nt +downstream
nt
atggacacacacttacacacactcttcttactaatgctgctgaacttctccacatacagc
gggttcctaatcagacacacgagtaaaggtgtgtgtgtgacggttcagggcggagtggtt
gtagttctgcggatctgtgatgtgaagaacccatctcaggactggacgtggactgcggac
aggaagctgaaacacacccactcggccgtgtgtttatgggtgaacctgagtgtgggcacg
ccctctcacgcccgcctggtgaagacacacccttgtaactctgcacctgcgtggaaatgt
tatgatgagtttgggaccttcgggctggaaatgttgcctctgtacctgcagaaacagggc
gagcgggtcgtggtccggtcggaacccaaacactccaactggacccggtacacagagcac
aaagtggagctgacacacatttgctcccacacaggtccttcaacagttgctaaaaccaca
ggagtgataacaacagtgaggatccctgtaacatcctacaacacagctagaaccagaacc
aaaaggacccggaccactggtacctttaataaagacaaactgactcacacagttggacca
gaacttctcaacctggagaaacaggaagccatctctgtcacgcagttcccttctgaaaag
agaaatgtgataagtaatgtcacggcggtttcagatttcctccaggacatgcgccagaga
acagacatgagctcagagtttattcccactgaaaggcgcaatatggtgacatcacttcct
gcaaacacacgcttcagatctccaactgcagggaacttctccaactcctccaactcctct
aactcctcctccactgcttctgtcttctcaacatcaataactgaagcagctgaaactcag
actgacatcaaaagtgtaaaacacatgacaacatggtcacatgtcacaggaagccgacac
tctgtaatatctagagcagtgctaaacaaaactcagacatcacgcatgaagactgcaacc
acaaccacagctgcccccagagtgaccacgatggagactacaattggacctacagtgact
gaaacactgagtgaaaacacatctactgcagcttttacatcagctacaactaaacccaga
actgcagatactcaaacaaccatgactgcccctgtaccccaaactactactagatttaca
tctgctcctgagactagagcagctccaaccacaaatggacttgtacctaaatctattagg
gcaactaattctaaaagtgtaactacactcaggactgtaactacagcaattggagcaaat
gcaacatcctttattactactgcagctccaactacaactgcccccggaactgcttcaact
ccaaatacagctactcctgtaactgttttggcttcaagtacacctgcccctataactaca
gctagcacagcaactagacctataaccaaagctcccaggtccaccacaattacccctatt
aataaagtgagaagggtaactatatctacccatgcaatatctatagctctaactacaact
ctagctacaattggctcaacaaatacagctaatgaagcaacaacagcttcatcaataact
acaactactgaggcatctacaactaccccaataactacaactactgaagcaactacaact
gtcccaatacctacaactactggggcaactacaattgcccaaataattataactactgag
gaaactacaactgccccaataactacaactactggggcaactacatctgccccaataatt
acaactcctggggcaactacaactgccccaataactacaactactgaggcaactacaact
gccccaataattacaactactgaggcaactacaactgccccaataactacaactactgag
gcaactacaactgccccaataactacaactactagagaaacaaagtctagaatggcacct
acagaagcaattacgactgcagagagtctgactactgaacctccaacaacaaccactcca
actaccactgtgacctccaccacattcaccacctccaccatgcctcagcgtgaaaccaca
gagaaacaggtcaggtgtgtggtcaaccaaactgaagccatcattaactcaaactcgtct
gtgattgagttcggatcagcaggacacttctgtgttttcactctgatcaaccgtgaaact
ggatctcagataaccaactgttctcagatccaaacccacagcaacaggtttacctgtgag
gtatcaggtctgaaacctggcactgtttatcattttggaattatttcccaaactgatgga
gagcatttcaacatttcacttcagaccgatccagctcagccctcaggtcttgagattact
ccagatgtttccctcagtcctggattgtggataaagtggctccgatctccagggcatgtt
gagtggtatgagttggtacttttagacttgaggatggatttcttgaagaaaaagaagatt
tcaggcaatgctgtgacacgctccaacttcaccaacctcatcccgggaacacgctacaca
ctccgccttgtggccaagtctgggaacaagacatctgtagctgctacagggaatgcagtg
atagctccatcagcagtaagcagtctgaacgtctccgccgtctccaccagcatcagggtt
tcctggcagccagggcctggacacacagaggaattctgggtaatgctgagtcatgaagat
gcactgatccagaaccagacgtttaaaaacactgtaacgtcatgcactctggacggcctt
agtccaggagcgctgtatacggtcactgtggtcacggaagcattcaggaaacaacaaaat
gcaacaaaagacattcggacagttcctgctccagtaaccgagctaaaactggagaacggt
ggcagtgaggactcattaaacacctcctggactcctgcagaaggagaagtggatgaatac
ctgatctccttaacttcctcttcctcctccactgaacaggaagctgtgctctcccccaac
acatcccattggcgcttccgcagactgacacctggacgggtctatcaggtgtcggtgagg
actaagagtggcgaactcagcactgaggctaaagctacaggtagaacagttcctgctcca
gtaaccgagctaaaactggagaacggtggcagtgaggactcattaaacacctcctggact
cctgcagaaggagaagtggatgaatacctgatctccttaacttcctcttcctcctccact
gaacaggaagctgtgctctcccccaacacatcccattggctcttccgcagactgacacct
ggacgggtctatcaggtgtcggtgaggactaagagtggcgaactcagcactgaggctaaa
gctacaggtagaacagttcctgctccagtaaccgagctaaaactggagaacggtggcagt
gaggactcattaaacacctcctggactcctgcagaaggagaagtggatgaatacctgatc
tccttaacttcctcttcctcctccactgaacaggaagctgtgctctcccccaatacatcc
cattggctcttccgcagactgacacctggacgggtctatcaggtgtcggtgaggactaag
agtggcgaactcagcactgaggctaaagctacaggtagaacagttcctgctccagtaacc
gagctaaaactggagaacggtggcagtgaggactcattaaacacctcctggactcctgca
gaaggagaagtggatgaatacctgatctccttaacttcctcctccactgaacaggaagct
gtgctctcccccaacacatcccattggcgcttccgcagactgacacctggacgggtctat
caggtgtcggtgaggactaagagtggcgaactcagcactgaggctaaagctacaggtaga
acagttcctgctccagtaaccgagctaaaactggagaacggtggcagtgaggactcatta
aacacctcctggactcctgcagaaggagaagtggatgaatacctgatctccttaacttcc
tcttcctcctccactgaacaggaagctgtgctctcccccaatacatcccattggctcttc
cgcagactgacacctggacgggtctatcaggtgtcggtgaggactaagagtggcgaactc
agcactgaggctaaagctacaggtagaacagttcctgctccagtaaccgagctaaaactg
gagaacggtggcagtgaggactcattaaacacctcctggactcctgcagaaggagaagtg
gatgaatacctgatctccttaacttcctcctccactgaacaggaagctgtgctctccccc
aacacatcccattggcgcttccgcagactgacacctggacgggtctatcaggtgtcggtg
aggactaagagtggcgaactcagcactgaggctaaagctacaggtagaacagttcctgct
ccagtaaccgagctaaaactggagaacggtggcagtgaggactcattaaacacctcctgg
actcctgcagaaggagaagtggatgaatacctgatctccttaacttcctcttcctcctcc
actgaacaggaagctgtgctctcccccaatacatcccattggctcttccgcagactgaca
cctggacgggtctatcaggtgtcggtgaggactaagagtggcgaactcagcactgaggct
aaatctacaggtagaacagttcctgcgaggccaatgtggtgtaagctaatgcctctcggt
gaccctgtctctcttaggctgtcctggtcacccactctaggacagtgggaatattacaaa
gtgcagctgctcaatgattcatttgtgataatgaatcaaatggtagacagagaagcaaag
gactttttgttcaccagtagaacctttctccccgggagattgtacagtgccaagatcact
gtgtttagcggttctttaaccaacacacagtcctgccaagcaagactcgcccctgggcgt
gttcagaagcttcttgtccatcataatgatgagtcgtcagtgtatgttcagtggcaccct
cctctgggagagtgggaggaatattctgtctatctgacagatgtaggaggagaggtgaag
aaaagacggacactaagcagagagataaatgagtgcagctttcatgacctcacacctgga
aaagagtataatatcaccgtggtaacacacagtggagacctgaacagctctaccaccatc
aacacccacaccattccagccagtgtcacacagctgaatgtcaataatgagggtacgact
gattctctgcgtgtaagctggactaaagcggaaggagatgttgacctgtaccgcatgctg
cttattcagaacatcatcgtgatcagaaatgagagtgtgacatcacagcagtcatcatat
agcttccatatgctgaagagcggtaccccctacagggtggtggtgatcagcatgaagaac
ggtgtgtcctccaaacagagagtgtctgaggggtgcacagtgcctgcagcggtgggtgga
gtctcagtcagtaataacggtcggacagatttccttagcgtgtggtggagaccggcgcag
gggcaagtggacaagtacacggtcacactcagtcaccacggcaacatcatacacacacac
actgtgctgaagtccacctccgagtgtgtgttcaactcactggtgtccggtcgcctatac
aacatcagcgtcaacacacacagtggggtgtacaccaaccgcacagtggtgcaggagaga
acacagccatctcctgtgctgacgccgtgtgttacacacatggcacgtgatgactctttg
agggtgtactggcgacatcctgctggagatttcgacttttaccagatagttgttcaacac
aacagtgtgatccaacacaacaccacagtcacacagtcccaggatgagtgtgtgttcact
aacctcgtcccaggacgactgtacatagtcataatcagcacttggagtggcaagtacgag
gccactgtgtccacccacgggagaacactccccgctggtgtgcgtaacctgacgttgttg
tctcaggggacacaggagttgggcgtggcgtgggcgtcggctgtaggagatgtggatcat
tatgaggttcagattgtgtttaatgatatgaaggtgtttcacccggtcactctgagcagc
agtacgactcagcacgtcctctcactgctcacgcccggacggctctataagatcatcgtg
tccaccttcagtggccccaatctcagtacacgcttcattgaagggaggacagtaccgagt
aaagtgaagaacatccacgtcagtaatgtagaggagacatcaagtctgcgtgtgagctgg
actccggctcagggtgatgtggacagttactgtgtgtttctgattggtccaggcggagtc
atagagacacgccccacccccaaacatgttaatgagataactttcagctcattacagcct
ggagaaaaatacagcatccgagtgcagactatcagtgggaatttacataacaacaacact
gttacagcacgtacagtgccttccccggggacatcagtgcatgtggacagtagtgtgagt
ctgagcagtgtgcgtgtgaggtggtccgtggggaaaggtgtgtgtgatgggtttagtgtg
ttgctgcaggatgagagagggtcggtattgaggaatgtcacactgccacctgtctcactg
cagcacgagttcacacagctcactccaggcaggaagtactgcatcctcatacacaccctg
agcggcgggatacagagcagagcggccatcacacacacacgcacactcccggcaccagtc
accgatctgtccgtcctgagccgatcatcatcatccctgtctcttggttggtctcgtcct
gtgggggattttgacagctttgtggtttacttgtacagaggtgacagctctctgcaggag
cagtgcagtggaggagcgaacatgatgagctgctccttctctcacctgatacctggaact
gaatacagagccacagttctgacaaagagtgcagaactcagcagcaaaaactacatccat
gcccgcacagtgccggaagccgtgtcctcagtgtgtgtggagagcaggaacaggacagac
atgctgtatgtgagctggaaacccgctgcaggtgaagtgagcggatacacagtcaccctg
tatgattcgactcaatcccagcatgccatgcagcatctgagctctgacatcacacagctg
gagttccatggacttgtacctggacacctctactatgccaacatcaccacacacagcgct
aacctctccaacatagctacctccatcgccaggaccgctccaaagccaccatcattgttc
tcctatggagatgtgaccaacacgtcagtggaggtgaaatgggcagggccaaatggatca
gattatgatgactttgatctgcagtggtctccgggtgacgctctgtcggtgattaacccg
tatcagagcaccacgttacaccgccgcctgctgaggggcctgtacccgggacgactgtac
acactccgcctctgcaccgtcagccgcacaggaggacatgctacatacagtcaacatgtc
ttcatacacatccgcaccaagcctcagaggatctcaagtctgcactgccggccgctgaac
tcatctgaggtgttgtgttcgtggagccccccacaggctgattttgactggtacagggtg
gagtgtttccgtcaggactcgggtgtgttggtgatctccaaccgaatgccgcgcaactcc
acactgtaccacatcacaaacctggaaccttacaaaagctacaacatctccattacagtc
atctccaacaacatggccagtgaggcagccgagcagaacaccagcaccatgatcgaccgc
ccccccctgccccccctgtccattcgggtcggtaaaagcatcgtccacatcactaagtcc
tccatcttcttccgttttgactgcagctggttcagtgacgctaatggagctgtccagtat
ttcagcatcatcgtaacagagtctggtgagagtgaagacgttcagcctgaacagcgccac
ccgctgccgtcctacagggattacatcaataacacttcggtgaaggtgtatcagtcagga
tatttccccagcaattgtgactatggactcggctccacacatactttcaacatcacactg
ggctcaggcatggacattctcggggggaagtgtgaacacacgcccacacacacactgagc
acggacacagagcgcggtgtgtactgcgatggccctctgaaacccaacactgcctacaga
gtaagtgtgcgagcgttcacacggctagcttcatctcctctctttagagataccttcctc
tctccacctttagtcacagacacagagcctctagtgggtgtgattgagggagtaagtgct
ggactcttcctcatcctctcaatggtgggaatcatcatcatcctcatctgcagacacaaa
acacacaaagttgtacaggagccaatggtgcggataaatgtaagaagagacagaacgaca
tcaatctcgagaatcagaggtttcaggaatcgacgcatatcaagtccgattaacatctta
aacttcgaggttcatctgactaaactgcaagctgactccaactacctgctgtctcaggaa
tacgaggatctgaaggaagtgggtcggaaccagcctctggacacggcgttactgccggaa
aaccgaggaaaaaaccgctacaacaacatcctaccatatgattcgactcgagtgaaactg
tcgtgtgtggatgatgatccgagttcagactacataaacgccagctacattcctgggaat
aatttcaggcgtgagtacatcgccacacagggaccactgcccggcactaaagatgatttc
tggaaaatggtgtgggagcagaacgtccacaacattgtcatggtgacgcagtgtgtggag
aaaggacgggtgaaatgtgaccactactggccgtttgatcaggacccactgtattatgga
gatctgattgtgcggatgcagtccgagtcagttctaccagagtggaccatccgggagttt
aagatctgtagtgaggatcagttgaattactgtagaactgtgcgtcagttccactacacc
gtgtggcccgatcatggagttcctgaaagcactcagtctctggtgcagtttgttcgcact
gtgagagattacatcaacagaactccgggttccggaccttccatcatccactgcagtgct
ggagtgggccgtactggtacctttattgttctggaccgggttctgcagcagctaaacact
aaagacacagtggacatttatggtgctgtgtttgacctgagactgcatcgctcacacatg
gtgcagactgagagtcagtacacatacctgcaccagtgtgtgcgtgacgttcttcgtgca
agaaagttacggagtgagcaagagaacccactgtatcctgtctatgagaacgtgcctcca
gagaaccactgggacagagtacacatgcgccgttaa
DBGET
integrated database retrieval system
