Ictalurus punctatus (channel catfish): 108269234
Help
Entry
108269234 CDS
T04658
Symbol
npas4a
Name
(RefSeq) neuronal PAS domain-containing protein 4A
KO
K26457
neuronal PAS domain-containing protein 4
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ipu03000
]
108269234 (npas4a)
Transcription factors [BR:
ipu03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
108269234 (npas4a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
bHLH_NPAS4
PAS_3
PAS_11
HLH
PAS
Motif
Other DBs
NCBI-GeneID:
108269234
NCBI-ProteinID:
XP_017330463
Ensembl:
ENSIPUG00000021543
UniProt:
A0A2D0RIW7
LinkDB
All DBs
Position
8:complement(11009156..11015373)
Genome browser
AA seq
926 aa
AA seq
DB search
MYRSTKGASKARRDQINTEIRNLRDLLPISDADKARLSYLHIMSLACIYTRKSVFFCQEA
AAAGSAEESAGFLSFHELSELVQSMPGFLLLLTAEGKLLYLTDSVSEHLGHSMVDLVAQG
DSVYDIIDPTDHAIMRSNLVPPTSPDTDRLFRCRFNTSKSVRRQSAGNKLVLIRARCLPP
VPVPSPQGSYWTSNPVWVCCCAPLEPHPPRPSTSTEQPLTPSLDSSFLLVCFRSQHSRDM
RLQDAQNSVSVYLGMDVETLRSHSWYSLLHPQDLSHASAQHRSLLREGGEGRAEMVVRVE
AGDHSWVWLYMVLQLETGENPISSNNYVISESEAWAVRQQLSSEETQLSVVLSSSTSQQD
TLSLQSPDTLSSPDQVFTPGSSGLSGQSFDFSMAVCSTGSTEEQGTSSSIEAMPLESGPR
SSLSSLEEETLFQQQPSESMDRPSAASSPDTVATVSDLDFLTQNILLPPAFQVDPPLPAL
PLPLPPVPTSQAQQTKEFVCTPPYTPQLGSSSFPFGEPLFSFDPTGATTPPPLPPTATVT
TTVAPTLSPSAPSNPQGSPAPPTTTLSTLVPLTLPGLSTEILFPSDPCSGSLYEKLPPTP
DSPGDGDCTVMSLPEVRGPLYVDVPYGPLPYPPEGLLTPETSPGKQPSLSFFSLEQEREK
ERTEISLLAHHISTLAEGFYLDPLLSKLLPSPISPQLSSPSPDLEGPETISLQGEFYPVK
SWRGLDLPIFPDDDSLFEESVLETIFQDLSSPSLSSTPSSPSSPPSSPPTPECWHPPLYF
DRVSTMSAGHFCSVQSAHSNHAAGCGATLSPVNKGDIVDGKAAGEVAMETGVVSSPLSTS
IPASPPLQLTASPVTPVPVDSPVSPASPGLPCAQSLLEELAALEPMFGAGASIAPGLGQQ
PELYQLQSHLPQQCFHKDGSGSDPPF
NT seq
2781 nt
NT seq
+upstream
nt +downstream
nt
atgtaccgttccactaaaggagcctcgaaagctcggagagaccagataaacacagagata
aggaacctgagggacttgttgcccatctccgatgcggacaaggcacgcctctcctatcta
cacatcatgtcccttgcgtgcatatacacgagaaaatctgtcttcttctgccaagaggca
gctgcagctggcagtgctgaggaaagtgcaggattcctctcatttcacgagctttctgag
ctggtgcaatcaatgccaggttttcttctgttactgactgcagaaggaaagctactttac
ctgacggacagtgtctctgagcaccttggacactcaatggtagatttggttgcccaaggg
gacagtgtgtatgacataatagaccctacagaccatgctattatgaggagtaacctggta
ccgccgacttcccctgatactgatcgattgttccgctgtcgtttcaacacctccaagtca
gtgcgaagacagagtgctggcaacaagcttgttttgattcgagctcgctgcttgccacca
gtacctgtcccttccccccaaggatcctactggacatccaatccagtgtgggtgtgctgt
tgtgcacctctggaaccccacccaccccgacccagcacctccactgaacaacctttgacc
ccatcattggacagcagtttcctcctagtgtgttttcgctcacaacacagtcgtgacatg
agactgcaggatgctcagaatagtgtcagtgtttatctgggtatggatgtggagactctt
cgctctcattcctggtacagcctactgcatccacaggacctttcacatgcttcagctcag
catcgcagccttttgagagaaggaggagaaggcagagctgaaatggtagttcgtgtggag
gctggggatcattcatgggtctggctttacatggtcctgcagctagagactggagagaac
cctatcagcagcaacaattatgtcataagtgagtcagaggcctgggcagtgaggcaacaa
ctgagctctgaagaaacccagctctctgtggtgttgagcagtagcacctcccaacaagac
accctcagcttgcagagtcctgatacactctccagtcctgaccaagtgttcacacctggg
agcagtggtctctcgggtcagtcgtttgacttcagcatggcagtgtgtagcacaggctct
acagaggaacaaggtacaagctcttctattgaagcaatgccactggaaagtggtccacgc
tctagtctttcctctctggaggaagagaccttgttccagcagcaacccagtgaatcaatg
gacaggccttcagctgcttcatcccctgacacagtcgccactgtgtcagatttggacttc
ctcactcagaacattctcctgcctcctgcttttcaggtagatcctccactacctgcactg
ccccttcctttaccccctgtgcctacctcccaggcccagcagactaaggagtttgtgtgt
acccctccatatacacctcagctagggagcagcagctttccctttggggaacccctcttc
agttttgaccccactggtgccaccacacctccacctcttccaccaactgcaacagtcaca
actacagtagcgcccactctttctccatctgctccctcaaaccctcagggcagccctgct
cctccaaccaccacactttccaccttggtgccactcaccctgccaggtttgtctacagaa
attctcttcccttcagatccttgcagtggctcactctatgagaagcttcctccaacccca
gacagtccaggtgatggggactgcactgttatgagcctgcctgaggttcgcggtccactg
tatgttgatgtaccatatgggccactcccctacccacctgaaggcctgctcacacctgaa
acctcacctggaaaacaaccaagcctgtctttcttctcgcttgagcaggagagagaaaaa
gaaagaactgaaatctcccttttagcccatcacataagcacactagctgagggcttctac
ctggaccctctcctctccaagttgttaccctctcctatctctcctcaactttcatctcct
tcgcctgacttagaaggaccagaaaccatctcacttcagggtgaattctatcctgtcaaa
tcctggagaggtctggacctgcccatcttcccagacgatgactctctgtttgaagagagt
gtcttagagaccatcttccaagatctctcctcaccatcactctcttccaccccttcctct
ccctccagtcctccttcttccccaccaactcctgagtgctggcatccacccctgtacttt
gacagggtctctactatgagtgccggccacttctgtagcgtccaatcggcgcactctaac
cacgcggccgggtgcggggccacactgtcgccagtcaacaaaggtgacatagtggatggg
aaggcggcaggcgaagttgccatggagacaggggttgtgtcatcaccactgtcgaccagt
atcccggcatctccaccgctgcagctgacagcctcgcctgtcactccggtgcctgtcgac
tcacccgtcagccccgcatcgcctggtctgccctgcgcccagtccctcctcgaggagctg
gccgccttggaacccatgtttggggcaggtgcctcgatcgcccctggcctggggcaacaa
cctgagttgtatcaactccaaagtcacctgccacaacagtgcttccacaaagatgggagt
ggaagtgatcctccgttctaa
DBGET
integrated database retrieval system
