Ictalurus punctatus (channel catfish): 108269254
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Entry
108269254 CDS
T04658
Name
(RefSeq) platelet-derived growth factor C isoform X1
KO
K05450
platelet derived growth factor C/D
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu04010
MAPK signaling pathway
ipu04020
Calcium signaling pathway
ipu04510
Focal adhesion
ipu04518
Integrin signaling
ipu04540
Gap junction
ipu04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
108269254
04020 Calcium signaling pathway
108269254
09133 Signaling molecules and interaction
04518 Integrin signaling
108269254
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
108269254
04540 Gap junction
108269254
09142 Cell motility
04810 Regulation of actin cytoskeleton
108269254
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
ipu04052
]
108269254
Cytokines and neuropeptides [BR:
ipu04052
]
Cytokines
Growth factors (RTK binding)
108269254
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CUB
Motif
Other DBs
NCBI-GeneID:
108269254
NCBI-ProteinID:
XP_017330503
Ensembl:
ENSIPUG00000003348
UniProt:
A0A2D0RJ07
LinkDB
All DBs
Position
8:complement(29676983..29743048)
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AA seq
385 aa
AA seq
DB search
MLNGTPACIQCVKLSQMIPLLLFSLLVSLLHGLDVESTLLTKLHHSNGKEHNGVQESQHE
KVVMVSGDGVVHSPGFPHTYPRSTVIVWRLVAANENARIQLTFDPRFGLEDPEDDVCKYD
YVEVEEPDGGMVLGRWCGSQSAPGPQTSKGNQIRIRFVSDEYFPSEPGFSVHYSVLQQKP
AVPAVMPVAVHSVEALSDAMSEFGTVEEVLKYLEPDRWQLDLEELYKPTWHVLGKSFFHQ
KKTRGPDAEIPSRSRLAEVADGRGAGASRGVQLRVQERLNEELDGGNIYWMDFVFTTVFK
LIKREMNMVYGDLAPVLVISQNVRWSGPVEILDGMMDHLTLKQNGQKKKKRFVFFFFKTI
SASDYAPEKDVSIFHAVFFFFFFFF
NT seq
1158 nt
NT seq
+upstream
nt +downstream
nt
atgctgaacgggactccagcgtgtatccagtgtgtaaagctgagccaaatgattcctctt
cttctcttctctcttctggtgtctcttcttcatgggttggacgtggaatccacgctcctc
actaagcttcaccactccaatggaaaagagcacaatggagttcaggagtctcagcacgaa
aaggtagtgatggtcagcggggacggagtcgtccacagtcccgggtttccacacacttac
ccacgcagcactgtgatcgtgtggaggctcgtggcagccaatgagaacgccaggatccag
ctgacctttgacccccgatttggcctggaggatcctgaggacgacgtgtgcaagtatgac
tatgtggaagtggaggaacctgatggaggtatggtgctaggtcgttggtgtggctctcag
tctgctcctggcccgcagacatccaaagggaaccagattcgcattcgcttcgtttcagac
gagtactttccctctgagccgggtttcagcgtccactactctgtcctgcagcagaagccg
gccgtgcccgccgtcatgcccgtggctgtgcacagcgtggaggctctgagcgacgccatg
tctgaattcggcacggtggaggaggtcctgaaatacctggagcctgatcgctggcagctc
gacctggaggagctttacaagcccacatggcacgtcctgggcaagtccttcttccaccag
aaaaaaaccagaggtcctgatgctgaaattccgtccaggtcgaggctcgcagaagtcgct
gacggacgtggcgctggagcatcacgaggagtgcaactgcgagtgcaagaacgactgaac
gaggagcttgacggaggaaatatttattggatggactttgttttcactacggtgttcaag
ctaataaaacgagagatgaacatggtttatggggacttggctccggtactggtcatctca
cagaatgttcggtggagcggtccagttgaaatattggacgggatgatggatcatttaacg
ttgaaacaaaacgggcaaaaaaaaaaaaaaagatttgttttttttttttttaaaacgatc
tctgcttctgattacgccccagaaaaggacgtgagcattttccacgctgttttttttttt
ttttttttttttttttaa
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