Ictalurus punctatus (channel catfish): 108269276
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Entry
108269276 CDS
T04658
Name
(RefSeq) E3 ubiquitin-protein ligase RLIM
KO
K16271
E3 ubiquitin-protein ligase RLIM [EC:
2.3.2.27
]
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ipu04121
]
108269276
Enzymes [BR:
ipu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
108269276
Ubiquitin system [BR:
ipu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
108269276
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-rbx1
zf-RING_11
zf-C3HC4_2
zf-C3HC4
zf-ANAPC11
zf-RING_5
zf-C3HC4_3
SPT6_acidic
zf-RING_UBOX
Prok-RING_4
zf-RING_16
zf-RING_4
zf-RING-like
Motif
Other DBs
NCBI-GeneID:
108269276
NCBI-ProteinID:
XP_017330524
Ensembl:
ENSIPUG00000015282
UniProt:
A0A2D0RKR2
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Position
8:complement(3316561..3324236)
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AA seq
643 aa
AA seq
DB search
MEGSDNADQGSSEQTDSQRRQQQDRLRREEAFYQFVNNLSEEDYRLMRDNNLLGTPGEIT
EEDLLNRLHQIRDGPEQPHSSSSSSSSSSSSNIPEVSRGEPRVSEAEGTEEASNGDTLLD
WLNTVRQTGNTTRSGHRGNQSWRAVSRTNPSSGDFRFSLEININRSIAEQQTQTEAERLD
ADQSRADGSVSEPETPMEAAEVVEEPVVEEMAVIVEPELPAPNSPAVTRPTSPQNPLPTS
PSLPQVERPSRGQIRARSPSPEQRRTRARTARSHLALSLDQLDGLPQARHGLPSRSPSEP
VPDVQVDGSSRTRLHVLSRQNIQLESEETIAATEPQPAPQPHQETETPSGEGGASARRPP
TIMLDLQVRRVRPGEYRERDSIANRTRSRSQTSNNTFLYETERGGFRRTFSRSERAGVRT
YVSTIRIPIRRISDAGLGEATSMALQSMIRQIMTGFGELSYFMDSDSDSTDSSRGSNPAA
DLADALGNPDAGSPSTVTEPSPGAGGSNQSGSEAQTEEREDSGAALRESRARQRAPISLE
ESGSLPFLRLAHFFLLNDDDDDQPRGLTKEQIDNLSMRNFGESDALKTCSVCITEYAEGN
KLRKLPCSHEYHVHCIDRWLSENSTCPICRRAVLVSANRESVV
NT seq
1932 nt
NT seq
+upstream
nt +downstream
nt
atggagggctcggataatgcagatcaaggcagtagcgaacagaccgattcgcaacgcagg
cagcagcaggaccgccttcgcagagaggaggccttctaccagtttgttaacaatctgagc
gaggaggactacaggctgatgagagacaacaatcttctcggcacaccaggtgaaattact
gaggaagacttgttgaatcgccttcatcagattagggacggccctgagcagccacacagt
agtagtagtagtagcagcagcagcagcagcagcaacattcctgaagtcagtaggggggaa
cccagagtttcagaggcagagggtacagaagaagcatccaatggcgacacccttcttgac
tggctcaacacggtgcgtcaaaccggcaacacaacaaggagcgggcaccggggcaaccag
tcatggcgtgcagtgagccgaaccaatccaagtagtggagacttccgcttcagcttggag
atcaatatcaatcgcagcatcgctgagcagcaaacacagactgaggcagagcgactagac
gcagaccaaagccgtgctgatggctctgtatcggaacccgagacacccatggaggcggca
gaggtggttgaagagccagtggtggaagagatggctgttatagtcgaaccagagcttcct
gcacctaatagcccagctgtaaccaggccgacaagcccacaaaatccgctcccaacttct
ccaagtctgcctcaagtagagcggccaagtcgaggccagattagagctcgtagccccagc
ccggaacagcgcagaaccagggcgcgaacagctaggagtcatttagccctcagcctggac
cagttagacgggcttccgcaggctcgccatggactaccttctcgaagtccttctgaacct
gtcccagacgttcaggtggacggcagctccaggacacgactacacgttctttctcggcag
aatatacagttagaaagcgaggaaactatagcagccacagagccccaaccagcacctcag
ccccaccaggaaaccgaaacaccttcaggggaaggaggcgcttcagcccgacgtcctcca
acaataatgctggacttgcaggttcgtagggtgcgaccgggcgagtaccgcgagagagac
agcatcgccaaccgtacccgctctcgatcacagacctccaacaacactttcttgtatgaa
acggagcgtggaggctttcgcaggaccttttcacgttctgagcgggccggtgtgaggacg
tacgtcagtactatccgtattcccatcaggaggatctccgatgctgggcttggcgaggcc
acttccatggctctgcagtccatgatccggcagatcatgactggctttggcgaactcagc
tacttcatggactctgactcggactccacggactcgagccgtggctccaaccccgcggcg
gatctagccgatgctctgggaaatccagatgctggaagtccctctactgtgactgagcca
tcacctggggcaggaggctcaaatcagagtggctcagaagcacagactgaagagcgggaa
gatagtggtgcagctctaagagagagcagagcaaggcaacgagctcctatcagtctagag
gagtccggctctttgccctttctgcgacttgcacatttcttcttgctcaacgacgacgat
gatgatcagcccaggggcctcaccaaagagcaaatcgataacctctccatgcgcaatttc
ggtgagagtgatgcactcaagacctgtagcgtctgcattacagagtatgctgaaggcaac
aagcttcgtaaacttccctgctcgcacgagtaccacgtgcattgtattgaccgttggctt
tcagagaattcaacttgccccatctgtcgcagggcagtcctcgtttctgccaacagagag
agtgttgtctag
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integrated database retrieval system