KEGG   Ictalurus punctatus (channel catfish): 108269276
Entry
108269276         CDS       T04658                                 
Name
(RefSeq) E3 ubiquitin-protein ligase RLIM
  KO
K16271  E3 ubiquitin-protein ligase RLIM [EC:2.3.2.27]
Organism
ipu  Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:ipu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:ipu04121]
    108269276
Enzymes [BR:ipu01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     108269276
Ubiquitin system [BR:ipu04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    108269276
SSDB
Motif
Pfam: zf-RING_2 zf-rbx1 zf-RING_11 zf-C3HC4_2 zf-C3HC4 zf-ANAPC11 zf-RING_5 zf-C3HC4_3 SPT6_acidic zf-RING_UBOX Prok-RING_4 zf-RING_16 zf-RING_4 zf-RING-like
Other DBs
NCBI-GeneID: 108269276
NCBI-ProteinID: XP_017330524
Ensembl: ENSIPUG00000015282
UniProt: A0A2D0RKR2
LinkDB
Position
8:complement(3316561..3324236)
AA seq 643 aa
MEGSDNADQGSSEQTDSQRRQQQDRLRREEAFYQFVNNLSEEDYRLMRDNNLLGTPGEIT
EEDLLNRLHQIRDGPEQPHSSSSSSSSSSSSNIPEVSRGEPRVSEAEGTEEASNGDTLLD
WLNTVRQTGNTTRSGHRGNQSWRAVSRTNPSSGDFRFSLEININRSIAEQQTQTEAERLD
ADQSRADGSVSEPETPMEAAEVVEEPVVEEMAVIVEPELPAPNSPAVTRPTSPQNPLPTS
PSLPQVERPSRGQIRARSPSPEQRRTRARTARSHLALSLDQLDGLPQARHGLPSRSPSEP
VPDVQVDGSSRTRLHVLSRQNIQLESEETIAATEPQPAPQPHQETETPSGEGGASARRPP
TIMLDLQVRRVRPGEYRERDSIANRTRSRSQTSNNTFLYETERGGFRRTFSRSERAGVRT
YVSTIRIPIRRISDAGLGEATSMALQSMIRQIMTGFGELSYFMDSDSDSTDSSRGSNPAA
DLADALGNPDAGSPSTVTEPSPGAGGSNQSGSEAQTEEREDSGAALRESRARQRAPISLE
ESGSLPFLRLAHFFLLNDDDDDQPRGLTKEQIDNLSMRNFGESDALKTCSVCITEYAEGN
KLRKLPCSHEYHVHCIDRWLSENSTCPICRRAVLVSANRESVV
NT seq 1932 nt   +upstreamnt  +downstreamnt
atggagggctcggataatgcagatcaaggcagtagcgaacagaccgattcgcaacgcagg
cagcagcaggaccgccttcgcagagaggaggccttctaccagtttgttaacaatctgagc
gaggaggactacaggctgatgagagacaacaatcttctcggcacaccaggtgaaattact
gaggaagacttgttgaatcgccttcatcagattagggacggccctgagcagccacacagt
agtagtagtagtagcagcagcagcagcagcagcaacattcctgaagtcagtaggggggaa
cccagagtttcagaggcagagggtacagaagaagcatccaatggcgacacccttcttgac
tggctcaacacggtgcgtcaaaccggcaacacaacaaggagcgggcaccggggcaaccag
tcatggcgtgcagtgagccgaaccaatccaagtagtggagacttccgcttcagcttggag
atcaatatcaatcgcagcatcgctgagcagcaaacacagactgaggcagagcgactagac
gcagaccaaagccgtgctgatggctctgtatcggaacccgagacacccatggaggcggca
gaggtggttgaagagccagtggtggaagagatggctgttatagtcgaaccagagcttcct
gcacctaatagcccagctgtaaccaggccgacaagcccacaaaatccgctcccaacttct
ccaagtctgcctcaagtagagcggccaagtcgaggccagattagagctcgtagccccagc
ccggaacagcgcagaaccagggcgcgaacagctaggagtcatttagccctcagcctggac
cagttagacgggcttccgcaggctcgccatggactaccttctcgaagtccttctgaacct
gtcccagacgttcaggtggacggcagctccaggacacgactacacgttctttctcggcag
aatatacagttagaaagcgaggaaactatagcagccacagagccccaaccagcacctcag
ccccaccaggaaaccgaaacaccttcaggggaaggaggcgcttcagcccgacgtcctcca
acaataatgctggacttgcaggttcgtagggtgcgaccgggcgagtaccgcgagagagac
agcatcgccaaccgtacccgctctcgatcacagacctccaacaacactttcttgtatgaa
acggagcgtggaggctttcgcaggaccttttcacgttctgagcgggccggtgtgaggacg
tacgtcagtactatccgtattcccatcaggaggatctccgatgctgggcttggcgaggcc
acttccatggctctgcagtccatgatccggcagatcatgactggctttggcgaactcagc
tacttcatggactctgactcggactccacggactcgagccgtggctccaaccccgcggcg
gatctagccgatgctctgggaaatccagatgctggaagtccctctactgtgactgagcca
tcacctggggcaggaggctcaaatcagagtggctcagaagcacagactgaagagcgggaa
gatagtggtgcagctctaagagagagcagagcaaggcaacgagctcctatcagtctagag
gagtccggctctttgccctttctgcgacttgcacatttcttcttgctcaacgacgacgat
gatgatcagcccaggggcctcaccaaagagcaaatcgataacctctccatgcgcaatttc
ggtgagagtgatgcactcaagacctgtagcgtctgcattacagagtatgctgaaggcaac
aagcttcgtaaacttccctgctcgcacgagtaccacgtgcattgtattgaccgttggctt
tcagagaattcaacttgccccatctgtcgcagggcagtcctcgtttctgccaacagagag
agtgttgtctag

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