Ictalurus punctatus (channel catfish): 108269295
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Entry
108269295 CDS
T04658
Name
(RefSeq) activating signal cointegrator 1 complex subunit 3 isoform X1
KO
K18663
activating signal cointegrator complex subunit 3 [EC:
5.6.2.4
]
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ipu03400
]
108269295
Enzymes [BR:
ipu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
108269295
DNA repair and recombination proteins [BR:
ipu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
108269295
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec63
DEAD
SNRNP200_wHTH
ResIII
Helicase_C
AAA_22
Helicase_PWI
AAA_19
Motif
Other DBs
NCBI-GeneID:
108269295
NCBI-ProteinID:
XP_017330572
Ensembl:
ENSIPUG00000013863
UniProt:
W6A3I4
LinkDB
All DBs
Position
1:complement(19664621..19839548)
Genome browser
AA seq
2205 aa
AA seq
DB search
MAPPRLTGALRSFSTVSKQENFPSELYDLKAKRLKRQELFAREGLTWAKLVQFFTQRLEK
KEQQRESQELKNLLQAAKQIVSTDFGQDAIDSAAVFLFKTFQNKEQVSHEETRAIKQMFG
PFPASAADTACAAVSQLVAQLGESQVEAFIQTQTTNKPIDHGMSFGKNIAFSFDAYVLDS
IDSLPWEEENGEGLSLDFNSFLSNHAGGRSSGLESVGAPSVSQSSSADRSILRREVEKYL
CGGNMGSSSVEELCTSLFEMLASTKSDDELQNELFEFLGPEGFEMISTLLQKRSDIVDSL
LSAPPDSRVSFPPDGMLKNVESAKPTYGCQVTIQSEQERQMMKLYRREEKRERKKEKRGD
ESELSEAFFNFDPKELRLQREQALLTARRSPVLGHQREYERIHYPNVYDAYAEATKTSAF
IGGSKMLLPESIRRENNKMFEQVEIPPNEPMPIGFQEKPVYITELDEIGQLVFKGMKRLN
RIQSIVFETAYNTNENMLVCAPTGAGKTNIAMLTVLHEIRQHLQPGGVIRKDQFKIVYVA
PMKALAAEMTNYFSKRLEPLGIAVKELTGDMQLTKGEILRTQMLVTTPEKWDVVTRKSVG
DVALSQIVRLLILDEVHLLHEDRGPVLESLVARTLRQVESTQSMIRILGLSATLPNYLDV
ASFLHVNPYIGLFFFDSRFRPVPLGQTFVGIKTTNKIQQLHDMEEVCYDKVLEQIKAGYQ
VMVFVHARNSTVRTAMNLIEMAKNRGESSFFQAEQGPDYGHCEKQVQRSRNKQMREMFPD
GFGIHHAGMLRQDRTLMENMFSRGYLKVLVCTATLAWGVNLPAHAVIIKGTQIYDAKRGT
LVDLGILDVMQIFGRAGRPQFDKYGEGTIITSHDKLSHYLTLLTQQNPIESQFHASLADN
LNAEVALGTVTNIEEAVKWLSYTYLYVRMRANPLAYGINHKAYQMDPRLELYRKELVVEA
GRKLDKARMIRFDERTGYFASTDLGRTASHFYIKYNTIETFNDLFDAQKTEADILSIVSK
AEEFEQVKVRDEELEELEKLLSCFCELPAAGGVENGYGKINILLQTYIGRGEVDSFSLIS
DLSYVAQNAARIMRALFEIALRKRWPAMTYRLLNLCKVIDKRLWGWAHPLRQFAMLPPTV
LSRLEDKNLTVDKLKDMRKDEIGHMLHHVNIGLKVKQCVHQIPAILMEATIQPITRTVLR
VRLTITPDFRWNDQVHGSVGEPWWLWVEDPINDHIYHTEYFLLQKKQVVSEEPQQVVFTI
PIFEPMPSQYYIRAVSDRWLGSEAVCVINFQHLILPERHPPHTELLDLQPLPVTALGNRE
YESLYKFTHYNPIQTQIFHTLYHTDTNVLLGAPTGSGKTIAAEMAIFRVFNKYPTAKAVY
IAPLKALVRERIEDWKVRIEEKLGRKVVELTGDVTPDMRAIAQADLIVTTPEKWDGVSRS
WQNRSYVQKVAILIIDEIHLLGEDRGPVLEVIVSRTNFISSHTTKTVRVVGLSTALANAR
DLADWLGIGQVGLFNFRPSVRPVPLEVHIQGFPGQHYCPRMASMNKPTFQAIRSHSPAKP
VLIFVSSRRQTRLTALDLIAFLATEDDPKQWLHQDEREMTDIIATVRDSNLKLTLAFGIG
LHHAGLHERDRKTVEELFVNCKIQVLIATSTLAWGVNFPAHLVIVKGTEYFDGKTHRYVD
YPITDVLQMMGRAGRPQYDDQGKAVILVHDIKKDFYKKFLYEPFPVESSLLGVLADHLNA
EITAGTIASKQDAMDYITWTYFFRRLVMNPSYYNLDDITHKTINKYLSNLVERTLRDLEC
SYCMEIQEDERTIEPLTYGRIASYYYLKHQTVRMFKERLKPELPIQELLSILTDAEEYAE
LPVRHNEDQLNSELAQRLPLQVNPHSYDSAHTKANLLLQAHFSRAQLPCSDYGTDTKTVL
DNTIRICQAMLDVVANEGWLVSALGICNLVQMIVQARWLHDSSLLTLPHIDQQNLYLFRK
WSTKGGKGGTRSYRGPIEGLPELIAACDGREEIFTAMVKEEFEPQQITQMWAVLSHLPVL
EVSLSVKGWWEGCEEQTERALSSSVANIRDQSSWLPVHPDQEYVLQVSLQRLNAGRQRRK
QDSKAQAPRFPKSKDEGWFLVLGEVDKRELLAVKRVGYVRNRNVASVAFYTPEQTGKCIY
TLYLMSDSYLGLDQQYDIHLNVIPASIAAQVNAEVTDSMSDMNLK
NT seq
6618 nt
NT seq
+upstream
nt +downstream
nt
atggctcctcctcggcttaccggtgcattgcgctctttctccacggttagcaagcaggag
aacttcccatccgagctgtatgatttaaaggccaagcgtttgaagagacaggagctgttt
gctagagagggtctgacctgggcaaagcttgtgcagtttttcacacaacggctagagaag
aaggaacaacagagagagtctcaggagctgaaaaatcttcttcaagcagccaagcagata
gtgagtacagatttcggacaggatgccattgacagtgctgcagtcttcttgttcaagaca
ttccagaacaaagagcaggtcagccatgaagagacccgggccattaagcagatgttcgga
cctttcccggcctcagcagctgatactgcctgtgctgctgtcagccagctggtagctcag
cttggagagtcccaggtggaagctttcatccagacccagacaacaaacaagcctatagat
catggaatgtcttttggaaagaacattgccttctcttttgacgcttatgtcttagacagt
atagatagtcttccatgggaggaggaaaatggtgaggggctgagcctggacttcaacagc
ttcttgagcaaccatgctggcgggcgtagctctggtttagagagcgttggagcaccgtca
gtgagccagagcagcagtgctgaccgctcaatccttagaagagaggtggagaagtacctg
tgtggtggcaacatgggttcatccagtgtagaggagctctgtacctcactgtttgagatg
ctggcttctaccaagagtgatgatgaacttcagaatgagctctttgagttccttggccct
gagggatttgagatgatctcaacgcttctccagaaaaggtctgatattgtggactctctt
ctgtctgcgccaccagacagcagagtcagcttcccacctgatgggatgcttaaaaatgtg
gaatctgctaaacccacatatggctgtcaggttaccattcagtctgaacaggagagacag
atgatgaaactctaccgtcgggaggagaaaagggagaggaagaaagagaaacgaggagat
gagagcgaactgtcagaagcgttttttaattttgaccctaaggagctgagactgcagaga
gagcaggcgttgctgaccgcacggcgttccccagtgttaggacatcagagggaatatgag
cgcattcactaccctaatgtctacgacgcgtatgctgaggccaccaagacctctgccttc
atcggaggctccaagatgctgctgcctgagagcatccggagagagaataataagatgttt
gaacaggttgagattccacccaacgagcccatgcctatcggcttccaggagaagcctgtt
tacatcacagagcttgatgagattggacagctggtgtttaaaggtatgaagcggctaaac
aggatccaatccattgtttttgagacggcctacaacaccaatgagaacatgctggtatgt
gctcccaccggagcaggcaagaccaacatcgccatgctcacggttctgcatgagatccgc
cagcacctgcagccgggaggcgttatccgcaaagaccagtttaagatagtatatgtagct
ccaatgaaggctttagctgctgagatgactaattacttcagtaagcgcttggagccactg
ggcatcgctgtcaaagagctgacaggcgacatgcagctgaccaaaggggaaattctccgc
actcagatgttggtgacaactccggagaagtgggacgtggtgacgaggaaaagtgttgga
gacgtggctctgtcccagatcgtacgtttgcttatcttggatgaggtgcacctgctgcat
gaagacagaggacccgtcttggagagcctggtggccaggacgctgcggcaggtggagtca
actcagagcatgattcgcatcctgggcctgtctgccacgctgcctaattacttggacgta
gcatcattcctgcatgtgaacccatacatcggcctgttcttcttcgacagccgctttcgc
cctgttccccttggacaaacctttgtaggaattaagactacaaataagattcagcagctg
catgacatggaagaggtttgctacgacaaagtgctggagcagattaaagctggatatcag
gttatggtttttgtccatgcccgtaactccactgtgcgcactgccatgaatctgattgag
atggccaagaaccgaggagaatcatcgttcttccaggcagagcaggggccggattatggc
cattgtgagaagcaggtgcaacgctcacggaataagcagatgagggagatgtttccagat
ggatttgggatccaccatgctgggatgctgaggcaggaccgcacactcatggagaacatg
ttttccagaggctacctaaaggtcctggtgtgcacagccactctggcctggggtgtcaac
ctgcctgctcatgcagtcatcattaagggtactcaaatctatgatgcgaagaggggcaca
ttggtggatctgggcatcctggatgtgatgcagatttttggccgtgctggccgtcctcag
tttgataaatacggagagggcaccatcatcacgtcacatgacaagctgagccactacctc
accctgctcacgcaacagaaccccatagagagtcagttccatgccagcctggctgataac
ctcaatgctgaggtggctttaggaactgtgaccaacattgaagaagctgtcaagtggttg
agctacacctacctctatgtacgaatgagagccaatccacttgcttacggcatcaatcac
aaggcctaccagatggatcccaggctggagttgtacaggaaagagttagtagtggaagct
gggcggaagctggataaagctcggatgatccgttttgatgagaggactggttattttgct
tctactgaccttggcagaacagccagccacttctacataaagtataacacaattgagacg
ttcaacgacctgttcgatgctcagaaaaccgaagccgacatcctgagtattgtctctaaa
gcagaggaatttgagcaggttaaggtccgagacgaggaactggaggaactggagaagttg
ttgagttgcttttgtgaactgccagcagctggtggagtagagaatggctacggcaagatc
aacatactgctgcagacctacatcggccgcggcgaggtggacagcttctccctcatctct
gacctgtcttatgtggcccagaatgctgcacgtatcatgagggctctgtttgagatcgct
ctgaggaagcgctggccagccatgacgtacaggctgctcaatctctgtaaggtaattgat
aagcgcctgtggggatgggcacaccccctgcgtcagttcgccatgctgcctcccactgtg
ctgtccaggctggaggacaagaatctcactgtggacaagcttaaagatatgcgcaaagac
gagataggtcacatgttacaccacgtgaatataggcttgaaggtgaagcagtgtgtccac
cagattcctgcaatactgatggaagctaccattcagccaatcacacgaaccgtcctgcgc
gtgcgtctcaccatcacccccgacttcaggtggaatgaccaggtgcacggctctgttgga
gaaccgtggtggctgtgggtggaggaccctatcaacgatcacatttatcacacagagtat
ttccttcttcagaagaaacaggtggtgagtgaggagcctcagcaggtggtgttcaccatc
ccgatctttgagcccatgccatcacagtactacatccgtgctgtttcggaccgctggctg
ggctctgaggccgtatgtgtcatcaatttccagcacctcattctacctgaaagacacccc
ccacacacagagctcctggacctacagccactgcccgtgacagcgttgggcaacagggag
tatgagagtctgtataagttcacccattacaatcccattcagacgcaaatcttccacacg
ctctaccatactgacaccaacgtgctgctcggagcaccaaccggctcgggaaaaaccatc
gcagcagaaatggctatcttcagagttttcaacaagtaccctacggctaaggcggtctac
attgctccactgaaagcactggtcagggagaggattgaagactggaaagtcaggatcgag
gagaagcttgggcggaaggtggtagagctgacaggcgatgtgactccggacatgcgggcc
atagctcaggctgatttgattgtcaccactccagagaagtgggatggagttagccgcagc
tggcagaatcgcagctatgtacagaaagtggccatccttattattgatgaaatccacctg
cttggggaggacagagggcctgttctggaggtcattgtatctaggacaaatttcatctcg
tcccacaccactaagactgtgcgagtggttgggctctccacagcactcgccaacgcgcga
gacctcgcagactggctgggcatcggacaggtgggattgtttaatttccggccttcagtt
cgtccggtcccattggaggtgcacatacaaggcttccctgggcaacactactgtcctcgc
atggccagcatgaataaacccaccttccaagccatccgcagccattcccctgccaagcct
gtcctgatatttgtgtcctctcgacggcagacgcgtctcactgcgcttgacctgatcgcc
tttttggctacagaggatgacccgaaacagtggttacaccaagatgagagagagatgaca
gatataattgccacagtgagggattcgaacctcaagttgactcttgcctttggcattggt
ttgcatcacgctggtctacacgagagagacaggaagactgtggaagagctgtttgtcaat
tgcaagattcaggtcttaatcgccactagtactctggcctggggtgtgaattttccagcc
catttagtgattgtgaaaggcacagaatactttgacggaaaaacacaccgttacgtggat
tacccaattacagatgttctacagatgatggggagggcaggtagacctcaatacgatgac
caaggcaaagcggtcatccttgtgcatgacatcaagaaagatttctacaaaaagttcctc
tatgaacccttccctgtcgagtcgagcttgcttggcgttttggctgatcacttgaatgcg
gagataactgcaggaactattgcttccaagcaggatgcaatggattacattacctggaca
tacttcttccgccgactcgtcatgaatcccagctactacaatttagatgacatcacccac
aagactataaacaagtacctgtccaatctggtggaaagaaccctcagagatctggaatgt
tcttactgtatggaaatacaagaggatgagcgcaccatagaacctcttacgtatggccgc
atcgcctcatattattacctgaaacaccagactgttcgcatgtttaaggagcgactgaag
ccagagcttcctatccaggagctgctgtccatcctcacggatgcagaggaatatgctgaa
ctgccagtgcgccataacgaagatcagctgaacagcgagctagcccagcggcttcctctg
caggtcaatccgcactcgtacgacagcgcccacaccaaggccaacctgctattgcaggcc
cacttcagccgagcccagctgccctgcagtgattatggcacagacacaaagaccgtcctg
gacaacaccatccgcatctgtcaggccatgttggacgtggtggcaaatgagggctggctg
gtgtctgctctgggcatctgtaatctggtccagatgatcgttcaggctaggtggcttcac
gactcctctctgctcaccctgcctcatatagaccagcagaacctgtacctcttcaggaaa
tggagcaccaaaggtgggaagggtggaacccgaagttatcgaggcccaatcgaagggctt
cctgagctcatagctgcctgtgatggaagagaggagatctttacagccatggtgaaggag
gagtttgagccccaacagatcactcagatgtgggctgttctaagccacttgcctgtgctg
gaggtcagtttgagtgtgaagggctggtgggaaggatgtgaggaacagactgagcgtgct
ctgtccagcagtgtagccaacatcagggaccagagcagctggctgcccgtgcaccctgac
caggaatatgtcctccaagtgtccctgcagcgtctcaatgcaggccggcaaagaaggaag
caggacagcaaggcacaggccccgcgtttccccaagtccaaagacgagggttggttcctg
gtgctgggcgaggtagacaagagggaacttctggccgtcaaacgagtgggatatgtccgc
aaccggaacgtggcctcagtggccttttacacacctgaacagactgggaagtgtatctac
acactctatctcatgagtgacagttacctgggcttggatcagcagtacgacatccacctg
aatgtgattcctgccagcatcgctgcccaggtcaacgccgaggtcactgatagcatgagc
gacatgaacttgaagtga
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integrated database retrieval system
