Ictalurus punctatus (channel catfish): 108269480
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Entry
108269480 CDS
T04658
Name
(RefSeq) neuronal PAS domain-containing protein 3 isoform X1
KO
K09098
neuronal PAS domain-containing protein 1/3
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ipu03000
]
108269480
Transcription factors [BR:
ipu03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
108269480
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAS_3
bHLH_HIF1A
PAS
PAS_11
PAS_9
PAS_4
HLH
Motif
Other DBs
NCBI-GeneID:
108269480
NCBI-ProteinID:
XP_017330882
Ensembl:
ENSIPUG00000001060
UniProt:
A0A2D0RK32
LinkDB
All DBs
Position
9:17665083..17918684
Genome browser
AA seq
973 aa
AA seq
DB search
MIRIFPDFSVQVTAAAGAGAAGMPAARVPGATNGNPQNVQGLTTYQQSDPYWERPANASS
CSAARPKTLHLGGQQHTSSPWLQALRKEKSRDAARSRRGKENFEFYELAKMLPLPGAITS
QLDKASIIRLTISYLKMRDFANQGDPPWNLRIEGPPPNTSVKAIGSQRRRSPSAVASEIF
EPHLGSHILQSLDGFVFALNKEGRFLYISETVSIYLGLSQVELTGSSVFDYVHPGDQVEM
AEQLGMKLPPGRSLLSQGAGAEDGASSASSSSHSETPEPVESSSPSHLSPDNTLERSFFI
RMKSTLTKRGVHIKSSGYKVIHITGRLRIRMALTHNRTVPNQIMGMVVVAHALPPPTINE
VRIDCQMFVTRVNMDLNIVYCENRISDYMDLTPVDIIGKRCYQFIHAEDVEGIRHSHLDL
MNKGQCVTKYYRWIQKNGGYIWIQSSATIAINAKNANEKNIIWVNYVLSNPEYKDTPIDI
TQLPNLPEKASESSETSDSESDSKDNSEDNENSKSDGKGNKSSENSEEPESDSKKPTRHS
EQEMRHQEEDSSSNAESQESEDSLEPSDCEAEHKESRLAHLSGLPIKVEHYGDGEGAELH
NSLSSSSEEEDEDEEEEEEDNDEIMKDYNSEGELSGPLTSKRQKRKKRRKKQKWEGSRQR
LRLSPPEAVTASPGSLEPALGEQPPLLPPPSPATASVLKIKTEMAEPINFDNDSSIWNFP
PNREISRNESPFSMTKPPSAHEAFPAAIPDSVLTPPGTEGGAGIRKPNFTNSSSSSSSNS
APNSTGLGPPLSNSSTSDPLSPPLSASPRDKQQGTPTSQNSLLYSGDLEALQRLQTGNVV
LPLVQRVAGTLAATSTAAAPRVYTAGTIRYAPADVTLAVQSNLLPSGHAAVNFVDVNGPG
FGIDAKTPMEMLYHHVHRLNMSGPFGGAGTGASLAQMPTANVFTTAEGLFSTLPFPVYSN
GIHTTQTLERKED
NT seq
2922 nt
NT seq
+upstream
nt +downstream
nt
atgatcaggatcttcccggacttcagcgtgcaggtgacggcggcggctggcgcaggagcc
gcagggatgccggcagcacgggtcccgggcgccaccaacggcaacccgcaaaacgtccag
ggcttgaccacttaccaacaaagcgacccttactgggagaggccagctaatgccagctcg
tgttcagccgctaggcccaagacacttcacctcggagggcaacaacatacctcatcacca
tggttgcaggctctgaggaaggagaagtcgcgtgatgcagcacgctcacgcagagggaag
gagaactttgagttctatgagttggccaagatgctgccactgccaggtgccatcaccagc
cagctggacaaagcctccatcatccgcctcaccatcagctacctaaagatgagggatttc
gccaaccagggcgacccgccatggaacctgcgcatcgaaggaccaccacccaacacctca
gtcaaagctattggctctcagcgaaggaggagccccagtgcagtcgcctcagagatcttt
gagcctcacctgggcagccacatcctacagtccctggatggattcgtatttgcactaaac
aaggaggggaggtttttgtacatctcagagaccgtgtccatatacctcggcctttcacag
gtggagttgacgggcagcagtgtgtttgactacgtgcacccgggtgatcaggtggagatg
gccgagcagttggggatgaagcttcctccaggccggagtctgctgtctcagggagccggg
gctgaggacggagcaagctcagcctcctcatcctcacactctgagacgcctgaacctgtg
gagtccagcagtccgagtcacctctctccagataacacgttggagcgttccttcttcata
cgaatgaagtccacgttgactaagagaggcgtccacatcaagtcctccggctacaaggtg
atccacatcacgggcagactgaggataagaatggcactaacgcacaatcgcacagtgccc
aatcagattatgggcatggtggtggtggctcatgccctccctccccccaccattaacgaa
gttcgcattgactgccagatgttcgtcacgcgggtcaacatggacctcaacattgtctac
tgtgaaaatagaattagcgactacatggacctgacacctgtggacatcataggaaaaaga
tgttatcagtttattcatgccgaggacgtggagggcattcggcacagccatttagactta
atgaataaaggccagtgtgtgacaaaatactatcgctggatccagaagaatggaggctat
atctggatccagtccagtgccactattgctatcaacgccaagaatgccaatgagaagaac
atcatctgggtcaactatgtgcttagtaatccggaatacaaagacacacccattgatatc
acacagcttccgaatctgccagagaaagcctcagagtcatcggaaacgtcagactcagag
tctgactctaaggacaactctgaagacaacgagaactccaagtcagatgggaaaggaaat
aagtcttctgagaacagtgaagagccagagtcagacagtaagaagcccaccagacactct
gagcaggagatgaggcatcaagaggaggacagctccagtaatgcagagagccaggagagt
gaggacagtttggaaccctctgattgtgaggctgagcacaaggagagccgcttggctcat
ctcagtgggctgcccattaaagtggagcactatggtgatggagagggggcagagcttcac
aattctctctcatcatcctctgaggaagaggacgaagatgaggaggaagaagaggaagac
aatgatgagattatgaaggactacaacagtgaaggggaactgagcggtccactgacaagt
aaacgccagaagagaaagaaaaggaggaaaaagcagaaatgggagggcagtcgtcagcgt
ctgcgactttcacctccagaagctgtcacagcaagtccaggaagtctggagccagcactg
ggagagcagcctccattactgccacctccatcacccgccactgcctcagtgcttaagatc
aaaacagagatggccgagcctatcaactttgacaacgatagcagtatctggaacttcccg
cctaaccgagagatctcacgcaatgagtcacctttcagcatgaccaagcctcctagtgct
catgaagccttccccgctgccatccccgactcagtcctcactccaccaggcaccgaagga
ggagcaggcatcaggaagcccaacttcactaacagcagtagcagtagtagcagtaacagt
gctcccaactcaactggcctgggacccccactgtctaactcctcaacctctgacccccta
tcacctccactttcagcctcaccacgtgataagcagcagggcacacccacctcccagaat
tcccttctgtacagtggtgacttggaggccctgcagcggctacagacaggcaacgtggtg
cttcccctggtgcagcgtgttgcaggcacactggctgccaccagcacagcagcggcacca
cgcgtctacacggcaggcaccattcgctacgcacccgctgacgtcacactggctgtgcag
agcaacctgctacccagcggccatgccgcagtcaactttgtggacgtgaacgggcctggc
tttggtattgatgccaagacacccatggaaatgctctaccaccacgtgcaccggctcaac
atgtcgggtccatttggtggcgcaggcaccggtgccagtctcgcacagatgcccactgcc
aacgtcttcaccacggcggagggactcttctctacgcttcccttccccgtctacagcaat
ggcatccacacaacacagactctcgagcgcaaagaggattga
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