Ictalurus punctatus (channel catfish): 108269496
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Entry
108269496 CDS
T04658
Symbol
gabrr2a
Name
(RefSeq) gamma-aminobutyric acid receptor subunit rho-2a
KO
K05190
gamma-aminobutyric acid receptor subunit rho
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu04080
Neuroactive ligand-receptor interaction
ipu04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
108269496 (gabrr2a)
04082 Neuroactive ligand signaling
108269496 (gabrr2a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ipu04040
]
108269496 (gabrr2a)
Ion channels [BR:
ipu04040
]
Ligand-gated channels
GABA-A
108269496 (gabrr2a)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
Motif
Other DBs
NCBI-GeneID:
108269496
NCBI-ProteinID:
XP_017330916
Ensembl:
ENSIPUG00000005251
UniProt:
A0A2D0RL90
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Position
9:complement(1280646..1296616)
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AA seq
481 aa
AA seq
DB search
MCRVERRVQRRMPGLEILLIVAVCLVSVEECRSYSPAREKRWTGAETEKRGVPLAKKPPD
VTKSRKVKTEQLLRVDDHDFTMRPAFGGPAVPVGVDVQVESLDSISEVDMDFTMTLYLRH
YWKDERLSFASTTNKSMTFDGRLVKKIWVPDVFFVHSKRSFIHDTTTENIMLRVFPDGHV
LYSLRVTVTAACNMDFSRFPLDSQTCSLELESYAYTDEDLMLYWKSGDESLSTDDRISLS
QFLIQKFHTTSRLAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWID
RRAVPARVSLGITTVLTMSTIITGVNASMPRVSYIKAVDIYLWVSFVFVFLSVLEYAAVN
YLSTVQDRRERKLRERLRAQSLSCTCGLPHTRTMMLDGTCSEADTNSLAGYTDAPMMPQE
VDKREHMVVHLSVSNASTATKKKGLRNFSIIQNTHVIDKYSRMIFPGSYIFFNLIYWSVY
C
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atgtgcagggtggagcgcagggtgcagcgcaggatgcctggtctggagatcttgctgatt
gtagccgtgtgtctggtttctgtggaggagtgcaggagttacagcccagcgcgtgagaaa
cgctggaccggagctgagaccgagaaacggggagtacctctggcgaagaagcctccagat
gtgaccaaatccaggaaggtgaaaaccgagcagctgctcagggtcgacgatcacgacttc
accatgaggccggcttttggaggtcccgctgttcctgtgggcgtcgacgtccaggtcgaa
agcttggacagcatttcagaagtagacatggacttcaccatgaccttatacctcagacac
tactggaaggacgagcgtctgtcctttgccagcaccacgaacaaaagcatgactttcgac
ggacgcttggtgaaaaagatctgggtgcccgatgtgttttttgtgcactcgaagagatcc
ttcatccatgacaccaccaccgagaacatcatgctgagagttttcccagacggccatgtt
ctctacagtctgagagtgacggttacggccgcctgtaacatggacttcagccgctttcct
ctggactcgcagacctgttctctagagctcgagagttatgcttacacagatgaagatctg
atgctgtactggaagagcggggacgagtctctgagcacagatgacaggatctccctctct
cagttcctcatccagaagtttcacactacctctcgtctggctttctacagcagcacaggc
tggtacaaccggctgtacatcaacttcacgctgcggcgtcacatcttcttcttcctgctg
cagacgtattttccagccacgctcatggtcatgctgtcctgggtttccttttggatcgac
cgcagagccgtgccagcccgagtttccctgggtatcaccacggtgctcactatgtccact
atcattaccggcgtgaacgcctccatgccccgagtgtcctacatcaaagctgtggacatt
tatctgtgggtcagctttgtgtttgtttttctctccgtccttgagtacgccgcagtcaac
tatctttccaccgtacaggacaggagagagcgcaaactccgagagcgactccgagcacag
tcgttgtcctgcacatgtggcttgccccacaccaggaccatgatgctggacgggacgtgc
agcgaggcggacaccaacagcctggcaggctacaccgatgctcccatgatgcctcaggag
gtggacaaacgtgagcacatggtggtgcacctgtcggtcagcaacgcctccacggctacc
aagaagaaaggcctgcgcaacttcagcataatccagaacacacacgtcatcgacaagtac
tcacgcatgatctttccaggatcctacatctttttcaacctcatatactggtctgtttat
tgctga
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