Ictalurus punctatus (channel catfish): 108269521
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Entry
108269521 CDS
T04658
Name
(RefSeq) mutS protein homolog 4 isoform X1
KO
K08740
DNA mismatch repair protein MSH4
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ipu03036
]
108269521
Chromosome and associated proteins [BR:
ipu03036
]
Eukaryotic type
Meiosis-specific proteins
Others
108269521
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_IV
MutS_II
AAA_14
AAA_22
ATPase_2
nSTAND3
AAA_29
AAA_23
Motif
Other DBs
NCBI-GeneID:
108269521
NCBI-ProteinID:
XP_017330953
Ensembl:
ENSIPUG00000023969
UniProt:
A0A2D0RKB4
LinkDB
All DBs
Position
9:15352848..15369724
Genome browser
AA seq
933 aa
AA seq
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MLRSSTEEVTAGYSSDTGTSSVSSSERSSSAAPSRWQEGTGAPPPSPQCSSHTPGSASSC
SGPGSTSDTLPGVQTTALSKTPVTTGSYRLNRVNSSSSSWTGGGVYSSLCRTSSTPRLRR
TPGSATCTLLGPTPQRELNMTSSSSASVCHAASVIVAVVEGRGLARGEIGMASINTRSPE
LVLSQFADTGTYAKVITKLHILLPFEILMPDTASEKGQGTKLYNLITENFPSVAFSAIQR
KYFNERKGLEYIQQLCAPEFNTVLMDVQTKYYCLAAAAALLKYFEFIQNSVYAPRSLKVS
FTGSEQTAMIDAVSAKNLELVMNNRGNRSEHTLLEVLNYTKTPGGERRLRSNILEPLLDV
DTINTRLDTVQELLHGEELFFGLKSAITQFLDIDQLLSALVQLPKQETVEVAEAKIMHVI
QLKHTLELIEPLKMVLKDAKTALLKAYYTSLEDSRFDSILDEIKTVINSDTSYLKGCLNM
RTQKCYAVRPNVNELLDIARRAYTEVVDDIAGLVDQLGEKYGLPLRTSFNSARGFFIQMR
LEGFGLPDGQLPGEFIKVTRQKNNYSFTTLDLMKMNDRCDEALKEIFHMSYIVVRRLLNE
VYKQIHCLYKLSDAVSMLDMLLSLANVCTISDYVRPEFTDTLAIRQGRHPILERVAGQQP
IPNNSHISEGSNFIIITGPNMSGKSTYLRQVALCQIMAQIGSFVPATFASFRVADQIFTR
IGVDDDFETNSSTFMVEMKEVSYITHNASNRSLIIIDELGRGTSAEEGIGICHSVCEFLI
SLKAFTLFATHFLELCQLETLYPNVENQHMQVQHMRGTENSTESVVYTYLLTQGFSEESN
YGIRAAENTSFPLSIIQEAKSISAKVSQKLWAKHHSDPTTLRQGAVFRLATRLLQTARNS
RLDPDSLRLYLKGLKRSYEAELKDSLESMDTEE
NT seq
2802 nt
NT seq
+upstream
nt +downstream
nt
atgctccgcagcagcactgaggaggtaacggccggttacagctcagacaccggcacaagc
agtgtgtccagctctgagcgcagctccagtgcagctccgtccaggtggcaggagggtact
ggcgcaccgcccccgtctcctcagtgcagctcacacacaccaggcagcgctagctcctgc
tccggtcctggatcaacctccgacactttgcctggtgttcagacgacagccctgagtaaa
actccggtcacgacaggcagctaccgtttgaacagagtgaactcgtccagctcttcatgg
actggtggtggggtctacagctcgctgtgcagaacctcgagcactcctcgcctcaggaga
acgccaggctcagctacgtgcaccctgctgggaccaactccacagcgagagctcaacatg
acgtcttcctcgtctgcatctgtgtgtcacgctgcatctgtaatcgtggctgtggtggag
ggccggggtttggccaggggagagatcggcatggccagcatcaacacaaggtcccctgag
ttggtactttcacagtttgcagatactgggacttatgccaaggtaattaccaaactgcat
atcttactgccttttgagattctgatgccagacactgctagtgagaaagggcaaggaacc
aagctctacaacctcatcacggagaactttccgtctgtagctttcagtgccattcagagg
aagtactttaacgagaggaaaggtctggagtacatccagcagctctgtgcgcccgagttc
aacactgttcttatggatgtacaaaccaagtactattgtctggcagctgcagcagctctc
cttaagtactttgagttcattcagaactctgtctatgctcccagatctctgaaagtgagc
ttcaccggaagtgagcagactgcaatgattgatgcagtctcagccaagaacttggagcta
gtaatgaacaacaggggcaacaggagtgaacacactctacttgaggtcttaaactacacc
aaaacacctgggggtgaaaggcggcttcgctctaacattctggagcctctgttagatgtt
gacaccattaacacacgcctggacaccgtgcaggaactgctgcacggtgaggaactcttc
tttggtctcaagagtgcaattacacaattcttggatatagatcagctgctttctgctctt
gtacagctccccaagcaagagacggttgaagtggctgaagcaaagataatgcatgtcatt
cagttgaaacacacgctagaactgattgaaccactcaagatggtgttgaaggacgctaag
acagccttactgaaagcttattacacttcactagaagatagcaggtttgacagcattttg
gatgaaatcaaaacagtgatcaacagtgacaccagctatttgaagggctgtctgaatatg
cgaacacaaaagtgctatgctgtacgccctaatgtcaatgaattgctagacattgcacgt
cgagcctacactgaggtagtggatgatatagcaggattagtagatcagctaggagagaag
tatggccttccactgcggactagttttaacagcgctcgaggtttcttcatccagatgagg
ctggagggttttggcctgcctgatggacagctcccaggagagttcatcaaagtaactaga
caaaaaaacaactacagcttcacgacgttagacctgatgaagatgaacgatcgttgtgat
gaagccttgaaggagatatttcacatgtcttatatcgtggtacgcaggttacttaatgag
gtgtataaacaaattcactgcttgtataagctgtctgatgctgtgtccatgctggatatg
ctgctctccctcgccaatgtttgcactatttcagactatgtgcgccctgaattcaccgat
acactggcaataagacaaggccgtcatccaatcctggaacgcgttgctggccagcagccc
atccccaataacagccatatctctgaaggaagcaactttattataatcacaggcccgaac
atgagtggcaagtccacttatctcagacaggtggccctctgccaaatcatggctcagata
ggatcatttgtgcctgctacatttgcctcgttccgtgttgctgatcagatattcactcgg
ataggagtagacgacgattttgagaccaactcgtcaacatttatggttgagatgaaggag
gtgtcctacataacacacaatgcaagtaacaggtcactcattattattgatgagctggga
cgtggcactagtgctgaggagggcatcggaatttgtcactcggtttgcgagttcctcatc
agtctgaaggcattcactctgtttgccacccacttcctggaactgtgtcagttggagact
ctttaccccaatgtagagaatcagcacatgcaggtccagcacatgcgtgggactgaaaac
agcacagagagtgtggtctacacctaccttctgactcaaggcttctctgaggaaagcaac
tacggtataagagcagcagagaacacatcgtttccactgtccatcatccaggaggccaag
tctatatcagccaaagttagccaaaagttatgggctaagcatcatagtgacccaaccacc
ctgcggcaaggggcagtgtttcgactcgccaccagattgttacagactgcccgaaactcc
aggttggatccagacagcctccgtctttacctaaagggtctaaaaagaagttatgaagct
gagttaaaggacagcttagagtccatggacacagaggagtga
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