Ictalurus punctatus (channel catfish): 108269525
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Entry
108269525 CDS
T04658
Symbol
otx1
Name
(RefSeq) homeobox protein OTX1 B
KO
K09326
homeobox protein OTX1
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ipu03000
]
108269525 (otx1)
Transcription factors [BR:
ipu03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain Paired-related
108269525 (otx1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TF_Otx
Homeodomain
Homeobox_KN
SatD
DUF5427
Motif
Other DBs
NCBI-GeneID:
108269525
NCBI-ProteinID:
XP_017330958
Ensembl:
ENSIPUG00000013113
UniProt:
A0A2D0RKB8
LinkDB
All DBs
Position
9:26855563..26861259
Genome browser
AA seq
329 aa
AA seq
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MMSYLKQPPYAMNGLGLSGAAMDLLHPSVGYPATPRKQRRERTTFTRSQLDVLEALFAKT
RYPDIFMREEVALKINLPESRVQVWFKNRRAKCRQQQQSGSSSTKARPVKKKSSPTREST
GSESSGQFTPPAVSSAGSASSSTSSSSSTNNSMSTSIGTVSSIWSPAMSPGSAPPSSSLS
EPVPPSSASCMQRSISGSASSSSSSSYPMSYNQTPAYGQSYPTPSGSYFSGVDCSSYLTP
MHSHHHPHQLSPMTPSSMPTHPHHHISQSSGHHHHHHHHHQAYSGAGLTFNSSDCLDYKE
QAASSWKLNFNTADCLDYKDQASWRFQVL
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atgatgtcatacctcaaacagcccccttacgccatgaacggcctggggctgagcggagcc
gccatggacctgctgcatccctccgtcggctatccagcaacgccacggaagcagcggaga
gagagaaccacattcacgcgctcacaactcgacgttcttgaagctcttttcgccaaaacg
cgttacccggatatattcatgcgcgaggaagtggccctaaaaatcaatctacccgaatcc
agagtgcaggtgtggtttaagaaccgtcgggcaaagtgtcgtcagcagcagcagagtggc
agcagcagcacaaaagctcggccagtcaagaaaaaatcttctcccactagagaaagcaca
ggctccgagagcagcgggcagttcacgccgccggccgtctccagcgccggctctgcttcc
tcgtccacctcttcctcatcctccaccaacaacagcatgtctacctcgatcggcacggtc
tcgtccatctggagcccagccatgtctccgggttcagcgcctccctcctcgtctctctcg
gagcccgttccgccctccagcgcctcctgcatgcagcgctccatctccggttcagcttct
tcctcctcctcttcctcttaccccatgtcctacaaccaaacgccggcgtacggccaaagc
taccccacaccatccggatcctactttagtggcgtggactgcagctcctacctgacgccc
atgcactcgcaccaccacccgcaccagctgagccccatgacgccgtcttccatgcccaca
cacccccaccaccacatcagccaatcttcaggacaccaccatcaccaccaccaccatcac
caggcgtacagcggcgccggcctgaccttcaactcctccgactgcctggattacaaggag
caagcggcatcctcctggaagctcaacttcaacactgcggactgtttggactacaaagac
caggcgtcctggaggttccaagtcttgtga
DBGET
integrated database retrieval system
