Ictalurus punctatus (channel catfish): 108269557
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Entry
108269557 CDS
T04658
Symbol
nkx2.1
Name
(RefSeq) homeobox protein Nkx-2.1
KO
K09342
homeobox protein Nkx-2.1
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ipu03000
]
108269557 (nkx2.1)
Transcription factors [BR:
ipu03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ANTP: NKL
108269557 (nkx2.1)
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Gene cluster
GFIT
Motif
Pfam:
Homeodomain
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
108269557
NCBI-ProteinID:
XP_017330995
Ensembl:
ENSIPUG00000023704
UniProt:
A0A2D0RM21
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Position
9:14346576..14349153
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AA seq
344 aa
AA seq
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MSMSPKHTTPFSVSDILSPLEESYKKVSMEGNSLGAPLASYRQPQVTQAAMQQHHMGHNG
AAVPAAYHMTATGVPQLSHTAMGGYCNGNLGNMSDLPAYQDGMRGSTTATSWYGANPDPR
FSTISRFMGSSSGMNMSSLGSLADVGKGMGSLSSAPRRKRRVLFSQAQVYELERRFKQQK
YLSAPEREHLASMIHLTPTQVKIWFQNHRYKMKRQAKDKVSQQQMQQESGSCQQQQQQSP
RRVAVPVLVKDGKPCQGGGHTPTSAAQNHHHQGANVMLMANNGAMGQHPSQQVGSAGQSP
DLGQHGTSPSSLQTQVTSLSHLNSSGADYGTALPCSALLYGRTW
NT seq
1035 nt
NT seq
+upstream
nt +downstream
nt
atgtcgatgagtcctaagcatacgactcctttttctgtgtccgatatcttaagtcctctt
gaggagagctacaaaaaagtaagtatggaggggaacagtttgggggctcctcttgcctcg
taccggcaaccgcaggtgacacaagctgcgatgcagcagcatcacatgggccacaacgga
gcagctgtgcccgctgcctaccacatgacagccacaggagtgccacagctgtcccacacg
gctatgggaggctactgcaacggcaatctgggcaacatgagcgacctgccggcttatcag
gacggcatgaggggcagcacgacagccacaagctggtacggagcaaatccagacccgcgc
ttttctaccatctctcgcttcatgggctcctcttctggcatgaacatgagcagccttgga
tccttggcagatgtgggtaaaggcatgggatccctgagcagcgctccgaggagaaagaga
cgcgtgctcttctcacaggcgcaggtctacgagctcgagcgccgcttcaagcagcagaag
tacctctcggcaccggaaagggagcacctagccagcatgatccacttgaccccgacccag
gtgaaaatctggttccagaatcaccgctacaaaatgaaaaggcaggccaaagacaaagtg
tcccagcagcagatgcagcaagagagcggttcttgccagcaacagcagcagcagtctccg
cggcgggtagccgtgcctgtgttggtgaaggacggcaaaccatgccaaggcgggggccac
actcccactagcgcggcacaaaaccatcatcaccagggcgccaacgtcatgctcatggct
aacaatggcgcaatgggccagcatccgagtcagcaggtaggcagcgctggccagtctcca
gatttgggccagcatggtaccagtccctcttccctccagactcaggtgaccagcctatca
cacctgaactcctctggcgccgactacggcacggccttgccctgttccgctctgctgtac
ggcaggacgtggtga
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