Ictalurus punctatus (channel catfish): 108269597
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Entry
108269597 CDS
T04658
Symbol
pcgf5a
Name
(RefSeq) polycomb group RING finger protein 5-A
KO
K11489
polycomb group RING finger protein 5
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
108269597 (pcgf5a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ipu03036
]
108269597 (pcgf5a)
Chromosome and associated proteins [BR:
ipu03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.3/1.5)
108269597 (pcgf5a)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RAWUL
zf-C3HC4_2
zf-C3HC4
zf-RING_2
zf-RING_UBOX
zf-C3HC4_4
zf-RING_5
zf-C3HC4_3
zf-RING_10
zf-RING_6
zf-Nse
zf-rbx1
Ubl_WDR48-Bun107
UBR4_Ub
Actin_micro
zf-C3HC4_5
RING_XB3-XBAT31
Etmic-2
DUF1272
Motif
Other DBs
NCBI-GeneID:
108269597
NCBI-ProteinID:
XP_053538811
UniProt:
A0A9F7RNA4
W5UAH5
LinkDB
All DBs
Position
9:31262199..31272526
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AA seq
237 aa
AA seq
DB search
MASQRRHLVRDFNRYITCSVCRGYLIKPTAVTECLHTFCKSCIVQHFEESNECPECGIQV
HETNPLEMLRLDKTLEEIIFKLVPGLREKEEQQEMDFWRKNKSRANGDEGPRAKRSRVSE
EEEDREEGEGGDYHRNDPQIAVCLDCLRNNGQSGESTVKGLMKKFIRCSTRVTVGTIKKF
LCVKLKLPSSYELDVLCNGEIMGKDHTLEFIYRTRWRLQGDTEYPMVLEYRPRIDFG
NT seq
714 nt
NT seq
+upstream
nt +downstream
nt
atggcgagccagaggaggcacctggtcagggactttaatcgctacatcacctgctccgtg
tgccggggttacctgatcaaacccaccgcggtcaccgagtgcctccacaccttctgtaag
agctgcatcgtccaacactttgaggagagcaacgagtgtcctgaatgtggcattcaagtc
catgaaaccaatcctctagaaatgctgaggttggataaaacgttggaggaaatcatcttt
aagctggttcctggtctgagagagaaggaggaacaacaggaaatggatttctggaggaaa
aataaatccagagctaatggggacgaaggtccgagggctaaaaggtctcgtgtgagtgag
gaagaggaggacagagaggaaggtgaaggaggggattatcacaggaacgacccacagatc
gccgtctgcctcgactgcctgaggaacaacggccaatcaggagagagcacagtgaagggt
ctgatgaagaagtttatccgctgctccacgcgcgtcactgtcggcaccattaagaagttt
ctttgtgtgaagctgaagttaccgagctcgtatgagctggacgttttgtgtaacggggag
atcatggggaaggaccacaccctggaattcatctaccgaacccgctggagactgcagggt
gacacagagtaccccatggttctcgagtaccgtcctcgcatcgactttggctaa
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integrated database retrieval system
