Ictalurus punctatus (channel catfish): 108269609
Help
Entry
108269609 CDS
T04658
Symbol
cep170ba
Name
(RefSeq) centrosomal protein of 170 kDa protein B isoform X4
KO
K16463
centrosomal protein CEP170
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ipu03036
]
108269609 (cep170ba)
Chromosome and associated proteins [BR:
ipu03036
]
Eukaryotic type
Centrosome formation proteins
Centriole proteins
108269609 (cep170ba)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CEP170_C
FHA
Yop-YscD_cpl
PBP1_TM
Motif
Other DBs
NCBI-GeneID:
108269609
NCBI-ProteinID:
XP_017331047
Ensembl:
ENSIPUG00000019558
UniProt:
A0A2D0RKK4
LinkDB
All DBs
Position
9:9962336..10002919
Genome browser
AA seq
1568 aa
AA seq
DB search
MSVTSWFLVSSSGTRHRLPREMIFVGREDCELMLQSRSVDKQHAVINYDPTTDEHLVKDL
GSLNGTFVNDLRIPDQTYITLKLSDVVRFGYDSHVYIMERSQHKVPEEALKHEKYTSQLQ
VGVNPLELGKTEQVDEKTRASDVPRSNHEKTERKSNTEPPVSKPTPLYGQPSWWGDDDDE
DHKREPGESISNHSSAEKQKEDSRQEVNGSSSEHQGKTVYLSRRDASYFEITTKELQSRS
RTTEQEVQVIPTKEPVNKAPPTPPVMQSHASFTIEFDDCTPGKIKIKDHVTKFSFRQRKN
PSKESLVTPTEVMSSESKVADWLVQTDTSVMRRNSRSDDLYTTKSDLSINKNTLKDGHHH
EDGTQSDSEDPVSNPQDLSKELTPQQLFTPPEREEPPMTSTPRCPNQPKKDPQQAFVINF
LDNEVRKSRSQSFTNSVSPAEFHMALKRRTEKTKGAVQSGESLTSSAVQNTPTQRFTVPL
KGSDGPQRAGSLRREKSDILGSASNFSSRSASSRPFGSVGRKSRVALDFLTGTEFLTVSK
PSSTDKSEKSPSSTYSKAYSIVSAVADNASQSQPSAMDQTHVLSPSQQLEPSTPLLTPIS
TSCADEKTPKGPRQEEDDTLSDAGTYTIETEGPDKEVEEARNLIDQVFGVLECPEYSTQP
SGASVYRSVEGDREAQDSLPVSENNPDPTLGHNPGYRDPATGPAQAASKGLSTGNAKWVS
RWASLADGYSDSGPISGQIDISTQMDLSGVGQIIPQSMHNRTNDSTGADDGQIYRARRIL
PQLPTRGEGQVPPPSIHVQPETYVERNIQGSLQKDHQKLYVSADLDPDSLSDASKSDDGS
IIELGRKTSTGKAERICTEDKADTSSKQDVMADKMVKDQDCTAKFSTATLTRQQGSSRKS
GDSSVSPPGKDASTCKENAASLMRQESFTKHRASDDIHFMKLPNISSPESSNDTNAFKGV
CNQDTQSYLKETENSLAVLEAKLQAQKHNRAPCAQEESLSGESDVDTSSTVSQRSSKNSG
TSAPKKPLIVSELLKGKKSASQRAKEQNLSGNLQSRKCRDISADSNYKESGKTSQRSTMH
HWSDAVSDQESGTQPVHRKYTIPLQNESSRRTLKGTVTQALARIGSFSAPKPTRTSMLRR
ARLGDASDNDGTETDRTSQNSDANSSSAKTQESKKLSRLDILALPRRRTSSFTTPSDTES
SAVRTGFSNRSEADSGFSARKASVPDIKTGTQKGSGTTGRQPIIRGRSSSAKYTSSTASS
RRRQKGSDYASTSEDEYESNYSMVKHKRSHHSGALHSSRIQTPDQVRPPSRSRDSEGEGH
ESDNFQNWTTHSAEIARLSQDLAKDLAILAQEIHNVAGDGETPNTAPVDAAEPASAVSSC
KELRQQIPETSLNYSKVRQSSAMSRNPDQTVSDKGLKHQSWKQEQVAMDHSMLNPVSQLS
MAIRENTEQLTEKIKLLFHNKKEVWEEIETVLDADDDSPPLESPNKEIMSIIRDLRGIQK
RLEVINTVIEPSGNVSLVKSSPVLSRSSAGLSSVRASSRDWRAAAPQRAAGSSAGARRFG
RGNDGRVL
NT seq
4707 nt
NT seq
+upstream
nt +downstream
nt
atgagcgtgacctcgtggttcctggtgagcagctcgggcacacgccaccgcctgccacgc
gagatgatcttcgttggccgggaggactgcgagttgatgctgcagtctcgtagtgtggac
aaacagcatgctgtgatcaactatgacccgaccacagacgagcaccttgttaaagacctg
ggcagtcttaatgggacattcgtgaatgaccttcgcatcccggaccagacctacatcaca
ctgaagctctctgacgttgttcgctttggatacgattctcatgtttacatcatggagcgg
agccaacacaaagtcccagaggaggctctgaagcatgagaagtacacgagtcagctgcag
gtgggtgtgaatcctctggagctcgggaagacggagcaggtggacgagaagaccagagct
tcagacgtgccacgctccaaccacgaaaagacagagcggaaatccaataccgagcctcca
gtctccaagcccactcctttgtatggccagccctcatggtggggtgatgatgatgatgaa
gaccacaagcgtgagcccggtgaatcaatcagcaaccacagtagtgcagagaaacagaag
gaagactccagacaagaggttaatggatcctcctctgaacaccaaggaaagactgtttac
ttgagtcgaagggatgcaagttactttgaaattaccaccaaggaattgcagtcaaggtcc
agaactacagagcaagaggtccaggtgatcccaacaaaagagccagtcaataaagcgccg
cctacaccccctgtaatgcagagccatgcctccttcaccattgagtttgatgattgcact
cctggaaagattaaaatcaaggaccatgttacaaaattctccttccgtcaacgtaagaac
cccagcaaagaatcactcgtcacgccgacggaggtgatgtcatcagagagcaaggtggct
gattggctggtgcagactgacacgagcgtgatgaggagaaattccaggtcagatgatctt
tacacgaccaagagtgacctttccataaacaaaaacactctgaaagatggacaccatcat
gaggatgggacacaaagcgactctgaagatcctgtctcaaatcctcaggacctctcaaaa
gagctgaccccccaacaacttttcactcctccagagagagaggaacctcccatgacctcc
acaccacgttgtccaaatcagccaaaaaaggacccccagcaagcgtttgtcatcaatttc
cttgataatgaggtacgcaagagtcgctctcagtcctttactaatagcgtgtctccagca
gaattccacatggcccttaaaagaagaacagagaagacaaaaggagctgttcaatctgga
gagagtttgacctcctcagctgtacagaacacacccactcagaggttcactgttcctctc
aaaggttctgatggtcctcagagggctggatcactgagaagagagaagagtgatattctt
ggcagtgcttcgaacttttcttctcgctcagcgtcctcgagaccatttggaagcgtgggt
cgcaagtccagagtggcactggattttctcactggcacggagtttctcacggtgtcaaaa
cccagttccacagacaagtcggagaagtctccatcctctacatactcgaaggcttacagc
attgtttcagcggtagcagataatgcttcccagtctcaaccctcagccatggatcagact
catgtcttatccccttcccaacagctagaaccatcaacacccctacttacacccatatct
accagttgcgcagatgagaagacccctaaaggtcccaggcaagaagaggacgacaccttg
agtgatgctggcacctacaccattgagacagagggacctgataaagaggtggaggaggca
cgaaacctgattgatcaggtgtttggtgttcttgagtgccctgagtacagcactcagcct
tcaggagcatcagtgtatagatctgtagagggtgacagggaggcccaggatagccttcca
gttagtgagaataatcctgacccaacattgggtcataatccaggctatagggacccagcc
acaggtccagcacaggcagcgtcgaagggattgtctactgggaacgctaaatgggtttca
cgttgggctagtttggctgacggctattcagactctggtccaatttcaggacaaatcgac
atttctacacagatggatctttcaggagtcggacaaattatccctcagtctatgcataac
cgaaccaacgacagcacaggggcagacgacggccagatttacagagcacgacgaattcta
cctcagttgcccacaagaggggaggggcaagtgcccccacctagtattcatgtacagcca
gaaacttatgtggagaggaacatacaaggttcactgcaaaaagatcatcagaaactgtat
gtctcagctgatctagatcctgacagtctgagtgatgctagcaagtcagatgatggttcc
atcatagagctgggtaggaaaactagcactggaaaagcagaaaggatttgcactgaggat
aaggcggacacatcatctaagcaagatgtaatggcagacaaaatggtaaaggatcaagat
tgtaccgcaaagttctctacagccactctaactagacagcaaggcagcagccgcaagtcc
ggtgattccagcgtttctccgcctggaaaggatgcctctacatgcaaggaaaacgccgcg
tcactcatgagacaagagagctttaccaaacatcgggccagtgacgacattcactttatg
aaattgcccaatatctcaagtccagaatctagcaatgatacaaatgcattcaaaggtgtg
tgcaaccaagacactcagtcttatctgaaagagaccgagaattcgctcgctgttttagaa
gccaaactccaagcgcagaagcacaaccgtgccccctgcgctcaggaggagtcgctttct
ggggagtcagatgtagacacatccagcaccgttagtcagcgtagtagtaaaaattctggc
acttctgcccctaaaaagcctttgatcgtctctgagctactgaaagggaaaaaaagtgct
agtcagcgtgctaaagagcagaatttgtcgggaaatcttcagtctcggaagtgcagggac
atttcagcagacagtaactataaggaatcagggaagacctctcagcgctccaccatgcat
cactggtctgatgctgtttcagaccaagagtcaggcacccaacctgttcatagaaagtac
accatcccacttcagaacgaaagctctaggagaaccctcaagggcacagtgacccaagca
ctagctcgtattggcagcttttctgcgccaaagcctacaaggacgtccatgctgcgccgt
gcccgcctcggcgacgcatccgacaacgatggtacagagactgaccgtacctctcaaaac
tcggacgccaattcgtcttccgccaaaacccaggagagcaaaaagctttctcgactggac
atattggctctgcccagaaggagaaccagctctttcactacacccagtgacacggagtcc
tcagctgtcaggactggcttttccaaccgctcagaggcagattctggtttctcagcacgt
aaggcttcagtacctgacatcaagactggtacacagaagggttctgggacaacgggcagg
caaccaatcatccgtgggcgatccagcagcgcaaaatataccagcagtacagccagctcc
aggagacgtcagaagggctcagactacgcctccacttcagaggatgaatatgaatctaac
tatagcatggttaaacataaacgctcccaccattcaggagccttgcacagctctagaatc
cagactcctgaccaggttcggcctccgtccagaagcagagactctgaaggggagggacac
gagagtgacaatttccagaactggacaactcatagtgcagagattgccaggctgagtcag
gacctggctaaagacctggccatcctggcccaggaaattcataacgttgccggcgacggt
gaaactccgaatactgcccccgttgatgctgcggaacctgcatctgctgtatctagctgc
aaggagttacggcaacagattcctgagaccagcctaaactactccaaagttcgacaaagt
tcagctatgagcaggaatcctgaccagaccgttagtgataaagggctcaaacaccagagc
tggaaacaggaacaggtcgctatggatcattcgatgctgaatcctgtctcccaactttcc
atggctattcgagaaaacactgagcaactgactgagaagatcaagcttttgtttcataat
aagaaagaggtgtgggaggaaatagaaacagtgctcgatgctgatgatgattctccacct
ttggaaagtccaaacaaggaaataatgtctattatccgagatctcaggggaatccagaag
cggttagaagtcatcaacacagtcatcgagcccagtggaaatgtcagtctggtcaagtct
tcgcctgtattaagccgctcttcagcaggtctaagcagcgtcagagcttcctccagagac
tggagagccgctgctcctcagcgggctgcaggatcctcagccggtgctcgacgctttggt
agggggaatgatggtagggttctgtag
DBGET
integrated database retrieval system
