Ictalurus punctatus (channel catfish): 108269620
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Entry
108269620 CDS
T04658
Name
(RefSeq) 5'-3' exonuclease PLD4 isoform X1
KO
K16860
phospholipase D3/4 [EC:
3.1.4.4
]
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu00564
Glycerophospholipid metabolism
ipu00565
Ether lipid metabolism
ipu01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09100 Metabolism
09103 Lipid metabolism
00564 Glycerophospholipid metabolism
108269620
00565 Ether lipid metabolism
108269620
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ipu04131
]
108269620
Enzymes [BR:
ipu01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.4 phospholipase D
108269620
Membrane trafficking [BR:
ipu04131
]
Exocytosis
Calcium ion-dependent exocytosis
Phospholipases
108269620
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PLDc_3
PLDc_2
PLDc
DUF7436
Motif
Other DBs
NCBI-GeneID:
108269620
NCBI-ProteinID:
XP_017331071
Ensembl:
ENSIPUG00000019558
UniProt:
A0A2D0RLP3
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All DBs
Position
9:10003381..10010127
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AA seq
506 aa
AA seq
DB search
MYSSCASTFQEVHELSSPYKSLHDNYVPNKRGLSGLKTLLLATGCLIILGGLLAIALLEE
MKNEEKINNTVTQNTTHQPEPHAEQCDHVGECRIDLVETIPLWMDYGTNATFGVPLYKAW
KDLLSTATQQVDIASFYWSLTGEDIGVKSSTDQFGRDILEELKALPKRNVSVRAVSSIPS
VATDSTDLKVLRENGVWVRRINFGRLTRGVLHTKFWIVDRRHIYIGSANMDWRALTQVKE
LGVVIYNCTSLATDLQKIFQSYWDMGHSNATIPVPWPPFYDTSINKHHPLHVNLSDVPSR
VYISNSPPAFCPDSRTKDLDAILSLISQAEQFIHVAVMEYFPASKFYHHHRYWPVIENAL
IGSVFERNLTLRLLISCGRDSDSAVFPFLKSLNALNSASDNIRIEVRLYIVPEGNETNIP
YTRVNHNKYMVTDNVGYIGTSNWSADYFNTTAGVGLVVSQDVSQSPSPGDTLLGQLSAVF
DRDWGSKFAVPLEKLGHNPDCAFSKA
NT seq
1521 nt
NT seq
+upstream
nt +downstream
nt
atgtactcatcctgtgcgtctacgtttcaagaggtccatgaattgtcctctccgtacaaa
tctttacatgacaattatgttcccaataagcggggcttgagtggacttaaaacattgctg
ttggccactggatgtttgattatcctagggggcttactcgccattgctttgctagaggag
atgaaaaacgaggaaaagattaacaacactgtgacccagaacaccacacatcagccagag
ccacatgctgaacaatgtgatcatgttggggagtgcaggattgatctggttgagactatt
cctttatggatggactatggaaccaatgccacttttggagtaccgctgtacaaggcatgg
aaagaccttctgtctacggcaacccagcaagtcgatatagcatcattctattggtctctt
actggtgaagacatcggcgtcaagtcctccactgaccagtttggtagagacatactggaa
gagttaaaagcactgccaaaaagaaacgtgtccgtgagagctgtgagcagcatcccttct
gtggcgaccgactcgacagacctgaaagtcctgagagaaaatggagtgtgggtcagacgg
attaactttggcagattgacccgaggagttcttcacactaagttctggattgtggacagg
agacatatctacatcggcagtgccaacatggactggagagcattaacgcaggtgaaagaa
cttggcgtggtgatatacaactgcaccagtctggccacagacctccagaagatcttccag
tcctactgggatatgggtcacagcaatgcaacgatcccagttccctggccccctttttat
gacacttccatcaacaaacaccaccctcttcatgtgaaccttagcgatgtgcccagtaga
gtttacatctcgaattctcctcctgccttctgtccggactcgcgcaccaaagacctggat
gccattttgtccttgatcagccaggcagagcagttcattcatgtagcggttatggaatat
tttcctgcctccaagttttaccaccatcacaggtactggccagttattgaaaatgcacta
atagggtcagtgtttgagaggaaccttacactgcgtctcctgatcagctgtggccgtgac
agcgactccgccgtattccccttcctcaagtccctcaacgccctgaactctgcatcggac
aacatcaggatagaagtgagactctacattgttccagagggtaacgagactaacattccc
tataccagagtaaatcacaacaaatatatggttacagataacgtgggatacatcggtacc
tctaactggtctgctgactacttcaacaccactgctggtgtcgggttggtggtttcccaa
gatgtttcgcagtccccctcacctggagacacattactggggcagctgagtgctgtgttt
gaccgagactggggctccaagtttgcagtgccacttgaaaaactgggccacaaccctgac
tgtgcgttttctaaagcatga
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