KEGG   Ictalurus punctatus (channel catfish): 108269646
Entry
108269646         CDS       T04658                                 
Name
(RefSeq) TATA box-binding protein-like 2
  KO
K03120  transcription initiation factor TFIID TATA-box-binding protein
Organism
ipu  Ictalurus punctatus (channel catfish)
Pathway
ipu03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:ipu00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    108269646
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:ipu03000]
    108269646
   03021 Transcription machinery [BR:ipu03021]
    108269646
Transcription factors [BR:ipu03000]
 Eukaryotic type
  beta-Scaffold factors with minor groove contacts
   TATA-binding proteins
    108269646
Transcription machinery [BR:ipu03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     108269646
  RNA polymerase III system
    TFIIIB
     108269646
  RNA polymerase I system
    SL1/TIF-1B
     108269646
SSDB
Motif
Pfam: TBP
Other DBs
NCBI-GeneID: 108269646
NCBI-ProteinID: XP_017331102
Ensembl: ENSIPUG00000001811
UniProt: A0A2D0RKQ8
LinkDB
Position
9:18272952..18277597
AA seq 311 aa
MDEEASLESYFDQSIAGSSEYIFGGDLGLQGPPQLQDPSFLSSSISNQQKEVSEDLDLSF
LPDELSAQDEGGENAGVDSAEDSGVYLDCTTATSTEADTDVNKSQPAASPFCNLPMTPMT
PMTPVAPVTERSGIIPQLQNIVSTVNLACPLDLKAIALQARNAEYNPKRFAAVIMRIREP
RTTALIFSSGKMVCTGAKSEEQSRLAARKYARVVQKLGFPAKFLDFKIQNMVGSCDVCFP
IRLEGLVLTHQQFSSYEPELFPGLIYRMVKPRIVLLIFVSGKVVLTGAKDRSEIYEAFEN
IYPILKGFRKQ
NT seq 936 nt   +upstreamnt  +downstreamnt
atggatgaagaggcgtcacttgagagttactttgaccagtcaattgctggttcctctgag
tacatatttggaggggatttgggtttgcagggcccaccgcagcttcaggatccctctttc
ctgtcctcctctatctccaaccaacagaaagaagtctctgaggacctggacctgagcttt
ctgcctgatgagcttagtgctcaggatgaagggggagagaatgcaggagtggactctgca
gaggacagtggtgtttatctggactgtacaactgcaacgtcgactgaagcagacactgat
gtcaataagagtcagcctgcagcctcccccttctgcaacctccctatgacccccatgaca
cccatgacccctgtcgcccctgtgactgaacgttcaggaatcatcccacaactacagaat
atagtgtccacagtaaacctggcttgtcctctagacctgaaagccatcgcccttcaagct
cgaaatgctgagtacaatccaaagcgttttgctgctgtaattatgcggatccgtgaaccc
aggaccactgccctcatcttcagctcaggaaaaatggtctgcactggtgcaaagagtgag
gagcagtctcgccttgctgcaaggaagtatgcccgggtggtacagaagcttggcttccca
gccaaatttcttgacttcaaaatccagaacatggttggcagttgtgatgtgtgtttcccc
atacggttggagggcctggttctgactcaccaacagttcagcagctatgaacccgagttg
tttcctggtttgatctaccgtatggtgaagccacggattgtcctcctgatttttgtgtct
ggaaaagttgttcttacaggtgctaaagatcgctccgaaatatatgaagcttttgagaat
atctacccaattctgaaaggattccggaaacagtaa

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