Ictalurus punctatus (channel catfish): 108269706
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Entry
108269706 CDS
T04658
Symbol
ptprub
Name
(RefSeq) receptor-type tyrosine-protein phosphatase U isoform X1
KO
K16662
receptor-type tyrosine-protein phosphatase U [EC:
3.1.3.48
]
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ipu01009
]
108269706 (ptprub)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ipu04515
]
108269706 (ptprub)
Enzymes [BR:
ipu01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.48 protein-tyrosine-phosphatase
108269706 (ptprub)
Protein phosphatases and associated proteins [BR:
ipu01009
]
Protein tyrosine phosphatases (PTPs)
Class I PTPs (Classical)
Receptor PTPs
108269706 (ptprub)
Cell adhesion molecules [BR:
ipu04515
]
Immunoglobulin superfamily
Type II RPTP family
108269706 (ptprub)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Y_phosphatase
Fn3_PTPRU
MAM
fn3
PTP-SAK
DSPc
Tc-R-P
Ig_DSCAM-DSCAML_C
PTPlike_phytase
Y_phosphatase3
Pur_ac_phosph_N
ig
Ig_3
I-set
Ig_2
Motif
Other DBs
NCBI-GeneID:
108269706
NCBI-ProteinID:
XP_017331166
Ensembl:
ENSIPUG00000015960
UniProt:
A0A2D0RLZ3
LinkDB
All DBs
Position
1:21714733..21969026
Genome browser
AA seq
1453 aa
AA seq
DB search
MKACAIILILVVHIHADSVEGPTAAGCTFDEDSDPSLCEFSQGEEDDFDWQLFRTHTLLH
STPDLLHGSYMIVNSSQHAAGQRAQLLLQTLSENDTHCVQFSYFLYSRDGHSPGALRAYV
RVNGGPLGMAVWNISGSQGHQWYQVELAVSTFWPNEYQVLLEATVDRWGYIAVDNILLLN
YPCYKAPHFSRLGDVEVNAGQNATFQCVAAGRASEAEKFLLEQHNGKVSSGGSVKHLGRN
RFSVSFQLEDVQRPEQDLYRCVTQSSRGSGVSNFAELIVKVPPSPIAPPQLLRAGSTYLI
IQLNTNSILGDGPIIRREIEYRASHAPWSEINGVNMLTYKLWHLDPDTEYHISVLLTRPG
EGGTGPPGPPLISRTKCAEPMRALRDLRASEIQARQLILQWEPLAFNLTRCHTYSVSLCY
RYAIAGGTSGAGHNTTIRECLAVERNTSRFTLRDLPPYHSIHVRLALANTEGKKEGKEVM
FQTEEDIPGGIAPESLTFTPLDDMVFLKWEEPVEPNGIITQYEISYQSIESSDPGINVPG
PRRTVSKLRNETYHMFSNLHPGTTYLISVRARTAKGFGQTALTEITTNISAPTFDYGDMP
SPLSETESTITVLLRPAQGRGAPVSMYQVVVEEESGRKLKRELGMQECFPVPTSHGEAQA
RGAPHYYTAELPPSSLAEGTPFTVGDNHTYNGYWNSPLDPRKNYLIYFQAMSNFRGETRI
NCIRIARKAACKDLRRAMEVTQHSEEMGLILGICAGGLVVLILLLGAIIIIIKKGRDYYS
YSYYPRKPVNMNKTPITYRQEKSHMMGSMERSFADQSTLQEDERMALSFMDAHTCSTRSD
PRSSMNESSSLLGGSPRRHCGSKGSPYHTGQLHPAVRVADLLQHINQMKTAEGYGFKQEY
ESFFEGWDVTKKKDKTKGRHDTLMDYDRHRVKLHPLLGDPNSDYINANYIDIRINREGYH
RSNHFIATQGPKQETVYDFWRMVWQENCFSIVMITKLVEVGRVKCYKYWPDDTEMYGDIK
ISLLKTETLAEYAVRTFSLERRGYSAKHEVQQFHFMSWPEHGVPYHATGLLAFIRRVKAS
TPADAGPVVVHCSMGAGRTGCYIVLDVMLDMAECEGVVDIYNCVKTLCSRRINMIQTEEQ
YIFIHDAILEACLCGETAIPVNEFALTYKELLRVDSQSNSSQLREEFQTLNSVTPHLDVE
ECSIALLPRNRERNRSMDVLPPDRALAFLVTTEGDSNNYINAALTDSFHRPAAFIVTPHP
LPGTTTDFWRLVFDYGCTSIVMLNQLNQSNSAWPCVQYWPEPGLQQYGPMQVEFLSMSAD
EDIITRLFRVTNVSRLQEGHLVVCQFQFLRWSAYRDVPDSKKAFLNLLAHVQKWQRECGD
GRTVVHCLNGGGRSGTFCACTILMEMIQYQSMVDVFYAAKTLRNAKPNMVESLEQYRFCY
DLVMEYLECMDLR
NT seq
4362 nt
NT seq
+upstream
nt +downstream
nt
atgaaggcgtgtgcgattatcctgattctggtcgtgcacattcacgccgacagcgtagag
ggacctacagcagcaggctgtacgtttgatgaggactctgaccccagcctgtgtgagttc
agccagggagaggaggatgattttgattggcagctgttccgcacccacaccttacttcac
agcacccctgatctcctgcatggctcctacatgatagtaaactcatcccagcatgctgct
ggccagagagctcagctgttgctgcagacgctcagcgagaatgacacacactgcgtccag
ttcagctatttcctgtatagccgggacggacacagccccggggcactgcgagcatacgtg
cgggtgaacggcgggccactgggcatggctgtgtggaacatctcgggctcgcaggggcat
cagtggtatcaggttgagctggcagtcagcaccttttggcccaatgaatatcaggtattg
ctggaggcgactgtagaccgttggggctatattgccgtggacaacatcttgctgctgaac
tatccttgctataaagcccctcatttctctcgcctgggggatgtggaggtcaacgctgga
cagaacgccaccttccagtgtgtggcagcaggaagagcatcagaggcagagaagttttta
ctggagcagcacaatggtaaggtgtcctcaggtggttcagtcaagcacctgggccgcaat
cgtttttcagtgtccttccagctggaggacgtccagaggcctgagcaggacctctaccgc
tgtgttacccagtcgtccagaggctctggtgtttctaactttgctgaactcattgtaaaa
gttcccccctctcccattgctccaccccagctgctgagagcgggttccacatacttgatc
atccagctcaacaccaactccatcttgggtgatgggcctatcattcgcagagagatcgag
taccgagcaagccatgcaccttggtctgagatcaatggcgtgaacatgctcacctacaag
ctctggcacctggatccagacaccgagtaccacattagtgtactgcttaccaggcctgga
gaaggtggcactggaccccccggaccccctcttatcagcagaactaaatgtgctgaaccc
atgcgagcactgcgtgacctgagggcttcagagattcaagctcggcagctcatcctgcag
tgggaacctctggcctttaacctcacacgctgccacacctattctgtctcgctgtgctac
cgctacgccatagcagggggcaccagcggtgctgggcacaacaccaccatcagagagtgc
ctagcagtggagcgcaacacctcacgcttcacccttcgagacctgccaccctaccacagc
atccatgtgcgccttgcccttgccaacactgaaggcaagaaggaggggaaagaggtcatg
ttccagacagaggaggacattcctggaggaatcgccccagagtctctaaccttcaccccg
ttggatgacatggtctttctaaagtgggaggagccagtggagcctaatggtatcattact
cagtatgagattagctaccaaagcattgagtcatctgaccctggaatcaatgtgccaggt
ccacggcgcactgtatccaagctgaggaatgaaacataccacatgttctccaacttacat
ccaggcaccacttacctcatctcagtacgggcacgaactgccaaaggttttggccagaca
gccctcaccgagatcaccaccaacatctcagcacccacctttgactatggagacatgcca
tctccactgagtgagacagagagcactataactgtgctgctgcgtcccgcccaaggccgt
ggtgccccagtcagtatgtatcaggtagttgtagaggaggagagtgggaggaagttgaag
agagagctggggatgcaggaatgttttcccgttcccacctctcatggtgaggcacaggca
cgtggcgctccacactactacacagctgaattgccccccagcagcctggctgagggcaca
ccctttactgtgggggacaaccatacctacaatggctactggaacagcccactagacccc
aggaaaaactacctcatctacttccaggccatgagcaacttccgaggggaaacaagaata
aactgcatccgaattgcccgtaaagcggcctgtaaggacctccggcgggctatggaggtg
acacagcactcggaggagatggggctgattctgggaatctgtgcaggggggctggtggtc
cttattctgttactaggagccataatcattatcattaagaaaggaagggactactactct
tactcttactatcctaggaagcctgtgaacatgaataagactcccattacgtacaggcag
gagaagagtcatatgatgggctcaatggagcgcagctttgcagaccagagcaccctgcag
gaggatgagaggatggctctgtcctttatggatgcccacacctgcagtacccggagtgat
ccacgcagctccatgaatgagtcaagcagcctgcttggtggatcacctcggaggcattgt
ggcagtaaaggttctccgtaccacactggccagcttcaccctgctgtacgtgtagctgac
ctgctgcaacacatcaaccagatgaagacagcagagggctacggattcaaacaggagtat
gaaagcttctttgaaggctgggacgtcacaaagaagaaggataaaacgaagggaagacac
gatactctaatggactatgatcgtcatcgtgtgaagctgcacccactccttggggatccg
aactccgactacatcaatgccaattacattgatattcggataaacagggaaggctaccat
cgatccaaccacttcattgccacacaggggcccaagcaggagacagtgtacgatttctgg
aggatggtgtggcaggagaactgcttcagcattgttatgattaccaagcttgtggaggtg
ggcagggttaagtgctataagtactggcctgatgacacagagatgtatggagacattaag
atcagcctgctgaagacagaaactctggctgaatatgcagtacgcaccttctccttagag
aggaggggttactcagctaagcatgaggtgcagcagttccactttatgtcatggccagag
catggagttccataccatgccacaggcctgctggccttcatccgccgtgtcaaagcctct
acaccagctgatgccggccctgtggtggtccactgcagtatgggagctggcaggacaggc
tgctacattgtgctggatgtcatgttggacatggcggagtgtgagggagtggtggacatc
tacaactgtgtgaaaactctctgttcccgccgcatcaacatgatccagacagaggagcag
tacatattcattcatgatgccatcctggaagcatgcctatgtggagagacagctatacca
gtaaacgagtttgcgctcacatataaggagttgctaagggttgactcccagagcaactcc
tcacagctacgagaagagttccagacattgaactctgtaacacctcacctggatgtggag
gagtgcagcatcgcactattaccacggaaccgtgagaggaatcgcagcatggatgttttg
ccgccagaccgtgctcttgctttcctggttaccacagagggtgatagtaacaactacatc
aatgctgctctcactgacagcttccatcgaccagcagccttcatagtgacgccccatcct
ctgcctggcacaaccaccgacttctggaggctggtgtttgactatggatgcacctccatt
gtcatgctcaaccagctgaaccagtcaaactctgcctggccttgtgtgcaatattggccc
gagcctggtctccagcaatatggccccatgcaggtagagtttctctccatgtctgctgat
gaagatatcatcacgcgtctgttccgggttacaaatgtgtcacggttacaggagggtcat
ctggtggtgtgccaattccagttcctgcgctggtcagcgtatcgtgatgttcctgactcc
aagaaggccttccttaacctgcttgcccatgtgcagaagtggcaaagagaatgcggcgat
ggtcgcactgtggtccactgccttaatggaggtgggcgtagtggcacattttgtgcatgt
actattctgatggagatgatccagtaccagagcatggtggatgtgttctatgccgctaaa
acactgcgaaacgccaaacccaacatggtggagtcattggagcagtaccgcttctgttat
gacctggtgatggaatatttggagtgcatggacctcagatag
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